Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g01074 | ATGGAGATGTCATTGCCGAAGCAACTTTCGAGCCACATCTGTACATTTTTTGATTTGTTATCCAGGAACAACATAAACTCAGAACCTATTCTGAGGCATTACCAAGAAACTGAAAGGTTAATGAAGCAGTTGAACTCAATAATAAAAGCACTTGTTGATCTTGAAATACAGTTTGATGAGGAACTTCATAAGCCATTTGAAGAAATAATTCATTTTGTGGATGTATTGATCGAGCATTTCGAAGAGTGGCGACCATTTTCAAGCAAAGTATTCTTTGTGCTGCAAAGTGAAGACCTGATGTCAGAGATCAAAAAACATGTCCTGGTTATTATCCAACTTCTGCAGGCTTCAAACGAACAATTGAATGCGGCATTGACGTTAAGTGAGCAATGGGTTGAAAACATTGAGCGCAAGGAATCTGAACAAATGTCAATTATCATCAACGATGCCCTCGGATATCAAGTAGAGGGCAGTCGGCCCAGCTCAGACGTGTTGGTGAAAATAGGAGAGTGCCTTAACTTAAGGACCAACCAGGAGATTCTGATTGAGGCAGTAGCACTACAGAAGTTGAAAGAGAATGCTGAACAAGCTGAACAGAACGACGAAGCTGAGCATATTGATCAAATTATTGCTCTTCTGATGTCCATGCATGAGCTGCTAATTGCAATTAGGAAGTCTCAATTTCATAGTCCTGTCGAAATACCTGCCGATTTGTTCTGTCCCCTCTCTCTGGAACTAATGACAGATCCAGTGATTGTGACATCTGGACAAACGTACGAACAGAGTTTTATCAAAAACTGGATTGACCTCGGCCTCAATGTTTGTCCAAAGACAAGACAGAAATTGGTCAACACTAATTTGTATCCGAATTTTACCGTCAAGGCACTTATCACAAACTGGTGTGAAATAAACAATGTGAAGCGGCCTGATTTCACTTGTACAGTGAGCTTAAACCAGACGTTGGTTGAACTCAGTGAGCTTAGACCTGATAAGAAGTTAAACTCATCCAATGAAATCGACGGGAAGCAATCTTCTCCTACTTATGCCAGTCCTACCATGGAAGGTTATCTGGTGGCCAACTCTAGTAATGACCCGGATATGGAAGAACAACAAGGAGCTGACTCAAGTAGAAGTGATTTTCCCATTATGGAGGAAGAACCAATTCAAAATATCAGCAGAACTGCAACTGACCAGAATGGAATTTCTAATCCTAACTTTTCTCCCACAACACCAGATGATGCTGATGAAGCTTCTTGGGTCTCGACTACTTTGAGTAAGTACAAAGGCATTGAGTTTGAGGAGGTTAAACCAGAGTCGCCACTTAGATTGATGGATGGACCATATCGAGATCAAACTTCAAGCAGGCAGTTTGTGAGTTTTATCCCTCGAATAGTTCATTCATCTGGGATTAGAACCAGCAATGATCTTTACGAGATTGAATCCCAAGTTAAGACTCTAGTTCAGGACTTGAAGAGCACTTCATCCGATACTATACGAGCAGCTACGGAGCAATTACGGCTGCTTGCAAAAGTCGACGTGGAAAATCGGATTCTGATTGCAACTTGTGGAGCCATTGGCCTTTTAGTCAATTTGCTCCACTCTCCTGATGCAAAGATCCAGGAATATTCTGTCACTGCCCTTCTTAACTTATCGATCAATGATAATAACAAAAGTATTATTTCTGCGGCTAATGCCATTGAACCGCTGATCCATGTCCTCAAAACTGGCAGCTCCGAGGCAAAGGAGAACTCAGCTGCTACCCTTTATAGTATTTCAGTGGTAGGAGATAATAAGCTCAGGATTGGAAGGTCTGGTGCTATTGGACCATTGATTGAATTGTTGGAGAAGGGCAGTCCAAGGGGGAAGAAAGATGCAGCCACAGCCCTGTATAATTTGTCGATATTGAACGAAAACAAGGTCAAGATAGTTCAAGCTGGAGGTGTGAAACATCTGGTGGACTTGATGGACCCAGCATATGGTATCATGGACAAGGCCGTATCGGCATTGGCAAATTTGGCGACAATTTCGGATGGTAAGATGGAGATTGGTCAACACCCAGGTGGCATTCCGGCATTGGTCCAGGTAGTAGAGTTGGGTTCTGCTCGAGGAAAAGAAAATGCAGCCGTTGCCCTTTTGCATCTTTGCTCTGCTAGTAATAAATTTTGTTGGATGGTGCTACAAGAAGGAGCAGTTCCTCCGTTGGTGGTGCTGTCACAATCCGGCACCCCGAGAGCCAGAGAAAAGGCGCAGTCGCTTCTGAAATGTCTCATAACTCTGCGACATGGCAAAGCTGGAAGAGTCTGA | 2304 | 42.97 | MEMSLPKQLSSHICTFFDLLSRNNINSEPILRHYQETERLMKQLNSIIKALVDLEIQFDEELHKPFEEIIHFVDVLIEHFEEWRPFSSKVFFVLQSEDLMSEIKKHVLVIIQLLQASNEQLNAALTLSEQWVENIERKESEQMSIIINDALGYQVEGSRPSSDVLVKIGECLNLRTNQEILIEAVALQKLKENAEQAEQNDEAEHIDQIIALLMSMHELLIAIRKSQFHSPVEIPADLFCPLSLELMTDPVIVTSGQTYEQSFIKNWIDLGLNVCPKTRQKLVNTNLYPNFTVKALITNWCEINNVKRPDFTCTVSLNQTLVELSELRPDKKLNSSNEIDGKQSSPTYASPTMEGYLVANSSNDPDMEEQQGADSSRSDFPIMEEEPIQNISRTATDQNGISNPNFSPTTPDDADEASWVSTTLSKYKGIEFEEVKPESPLRLMDGPYRDQTSSRQFVSFIPRIVHSSGIRTSNDLYEIESQVKTLVQDLKSTSSDTIRAATEQLRLLAKVDVENRILIATCGAIGLLVNLLHSPDAKIQEYSVTALLNLSINDNNKSIISAANAIEPLIHVLKTGSSEAKENSAATLYSISVVGDNKLRIGRSGAIGPLIELLEKGSPRGKKDAATALYNLSILNENKVKIVQAGGVKHLVDLMDPAYGIMDKAVSALANLATISDGKMEIGQHPGGIPALVQVVELGSARGKENAAVALLHLCSASNKFCWMVLQEGAVPPLVVLSQSGTPRAREKAQSLLKCLITLRHGKAGRV | 767 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 15620449 | 15623738 | + | BLOR13986 | Blo04g01074 | 60102 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g01074 | 767 | SMART | Ubox_2 | 237 | 300 | IPR003613 | GO:0004842|GO:0016567 | |
Blo04g01074 | 767 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 605 | 647 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | CDD | RING-Ubox_PUB | 240 | 280 | IPR045210 | - | |
Blo04g01074 | 767 | Pfam | Armadillo/beta-catenin-like repeat | 513 | 551 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | Pfam | Armadillo/beta-catenin-like repeat | 597 | 633 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | Pfam | U-box domain | 234 | 304 | IPR003613 | GO:0004842|GO:0016567 | |
Blo04g01074 | 767 | PANTHER | U BOX DOMAIN-CONTAINING | 13 | 757 | - | - | |
Blo04g01074 | 767 | SMART | arm_5 | 675 | 716 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | SMART | arm_5 | 512 | 552 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | SMART | arm_5 | 471 | 510 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | SMART | arm_5 | 553 | 593 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | SMART | arm_5 | 594 | 634 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | SMART | arm_5 | 635 | 674 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | ProSiteProfiles | U-box domain profile. | 233 | 307 | IPR003613 | GO:0004842|GO:0016567 | |
Blo04g01074 | 767 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 646 | 687 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | MobiDBLite | consensus disorder prediction | 332 | 351 | - | - | |
Blo04g01074 | 767 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 523 | 565 | IPR000225 | GO:0005515 | |
Blo04g01074 | 767 | SUPERFAMILY | ARM repeat | 482 | 757 | IPR016024 | - | |
Blo04g01074 | 767 | Gene3D | - | 448 | 764 | IPR011989 | - | |
Blo04g01074 | 767 | MobiDBLite | consensus disorder prediction | 356 | 416 | - | - | |
Blo04g01074 | 767 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 233 | 308 | IPR013083 | - | |
Blo04g01074 | 767 | Coils | Coil | 34 | 54 | - | - | |
Blo04g01074 | 767 | SUPERFAMILY | RING/U-box | 231 | 310 | - | - | |
Blo04g01074 | 767 | MobiDBLite | consensus disorder prediction | 356 | 377 | - | - | |
Blo04g01074 | 767 | MobiDBLite | consensus disorder prediction | 389 | 416 | - | - | |
Blo04g01074 | 767 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 13 | 757 | - | - | |
Blo04g01074 | 767 | Coils | Coil | 177 | 207 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g00269 | Blo-Chr1:3421716 | Blo04g01074 | Blo-Chr4:15620449 | 1.58E-09 | dispersed | |
Blo04g01074 | Blo-Chr4:15620449 | Blo03g01237 | Blo-Chr3:38604917 | 6.72E-24 | dispersed | |
Blo06g01160 | Blo-Chr6:35002246 | Blo04g01074 | Blo-Chr4:15620449 | 8.09E-18 | dispersed | |
Blo12g00191 | Blo-Chr12:12592799 | Blo04g01074 | Blo-Chr4:15620449 | 4.46E-11 | dispersed | |
Blo05g00407 | Blo-Chr5:5112545 | Blo04g01074 | Blo-Chr4:15620449 | 1.20E-149 | transposed | |
Blo10g00672 | Blo-Chr10:21598819 | Blo04g01074 | Blo-Chr4:15620449 | 5.72E-10 | transposed | |
Blo12g01122 | Blo-Chr12:28859392 | Blo04g01074 | Blo-Chr4:15620449 | 1.86E-29 | transposed | |
Blo17g00885 | Blo-Chr17:29287671 | Blo04g01074 | Blo-Chr4:15620449 | 5.87E-12 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g01074 | - | - | pper:18773704 | 758.829 |