Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01079 ATGAAAGTTAAGGTGATATCACGTTCCGCAGATGAATTCAGTCGCGAGCGAAGTAATGATCTCCAGAGAGTGTTTCGAAATTTCGACCCCAACCTCCGAACTCAGGAAAAGGCTGTCGAGTATGTTCGCGCTCTTAATGCGGCTAAATTGGACAAGATTTTTGCCAGACCGTTTATCGGAGCAATGGATGGTCATATAGATGCAGTGTCGTGTATGGCGAAGAACCCTAATCAATTGAAAAGCTTGTTTTCTGGTTCAATGGATGGAGATATTCGACTTTGGGATATAGCTAACAGGTATGACGATCTATGTGGAATGAAATTAATTTGTGCTGAGTCTTTTGAATTTGCTGATATCAGACCGAAAAATCAAATGACAATTATTTTAGAAAATATTTGCACATTTCCTGGTCATCAAGGTGCAGTACGAGGACTTACGACATCTACAGATGGGCAAATTCTTGTATCATGTGGAACGGATAGCACTGTCAGGCTGTGGAAAGTCCCCCTTCCTTCTCTTGCAGAGCCTTTCTACTCAACAGCTAAGTCTGCTGAGCCAATGGCAGTTTATGTTTGGAAGAATGCATTTTGGGGCGTTGATCATCAATGGGAAGGAAATCTTTTTGCCACGGCTGGTGCTCAAGTGAATATTTGGGATCACAACAGATCTCAACCTGTCAACAGCTTTGAGTGGGGAACTGATACTTTCATATCCCTACGTTTCAATCCTGGAGAACCAAATGTGTTTGTAACATCAGCTAGTGACCGAAGCATTACATTGTATGATTTACGCATGTCTTTGCCAGCAAGAAAAGTAATTATGATGACAAAAACCAACTCCATATCTTGGAATCCAATGGAGCCGATGAATTTCACAGCTGCGAATGAGGACTGCAACTGCTATAGCTATGATGCTAGAAAGCTTGATGAGGCCAAATGCGTGCATAAAGATCATGTTTCTGCAGTGATGGATGTTGATTTTTCACCAACTGGTCGAGAATTTGTTACCGGGTCATATGATAGAACAATCAGAATTTTCAATTATAATGGGGGTCACAGTAGGGAGTTGTATCATACTAAAAGGATGCAAAGGGTGTTTTGTGTCAAGTTTAGCTGCGACGCGAGTTATGTTATATCAGGAAGTGATGATACAAACCTTAGACTGTGGAAAGCAAAGGCATCCGAACAGCTAGGAGTTCTACTCCCTAGAGAGAGAAGGAAACATGAGTATCACGAGGCTGTGAAGAATCGATACAAGCACCTCCATGATATCAAGCGAATCGTGAGCGAAGAATTGATGCGATGCATGCATTTTGATGGTGATTGTGAACAGGTACAGCTGAGAGAGAATTTCTACGCCGGTGTCTGCCCAAATGTCGAAACTATTGTTAGGAACGCTGTTGCCAAGAAATTCAATGAGACCTTCGTCACTGTTCCTGCAACTCTTCGCCTCTATTTCCATGATTGCTTTGTCCAGGGATGTGATGCGTCGATTATAATCGCTTCGACTCCAACCAACACGGCGGAGAAAGACTACCCGGATAACCTCTCGCTAGCCGGAGATGGATTCGACACCGTGATTAAAGCGAAAGCGGCGGTGGACGCCAACCCACAATGCACAAACAAAGTATCCTGCGCTGATATTCTGGCGATGGCGGCCAGAGACGTGATTGCTCTTGCAGGTGGACCGTCTTACCAGGTGGAGCTGGGGAGATTGGACGGGCTCGTCTCGAGAGCTTCAGACGTTAAAGGGAAATTGCCTCAACCGGGGTTCAATCTAAACCAGCTCAACGCCATGTTCAACGCTAATGGTCTCACTCAGCAAGATATGATTGCTCTGTCAGCTGCCCACACCGTCGGATTCTCGCACTGCAGCAAGTTCTCGAATAGGATATTCAATTTCAGCCGGACCCAACAAGTTGACCCGACACTGAACAAAGACTACGCCACGCAGCTACAGCAAATGTGTCCAATAAATGTCGACCCGACTATAGCGGTCAACATGGATCCGATCACCCCCCAGAAGTTCGACATCCAGTACTTCAGAAACCTGCAACAAGGAAAAGGCCTTTTCACGTCCGATCAAGTTCTCTTTACCGACCCGAGATCCAGGTCGACGGTCAAGGTTTGGGCCAAAAGGACTCCCATCTTCTCCGACGCCTTCATCTCTGCGATTACCAAAATGGGTAGGATCGGAGTGAAGACCGGCTCGAATGGGAACATCCGGAGAGACTGCGGAGTATTTAACAGCTGA 2253 45.63 MKVKVISRSADEFSRERSNDLQRVFRNFDPNLRTQEKAVEYVRALNAAKLDKIFARPFIGAMDGHIDAVSCMAKNPNQLKSLFSGSMDGDIRLWDIANRYDDLCGMKLICAESFEFADIRPKNQMTIILENICTFPGHQGAVRGLTTSTDGQILVSCGTDSTVRLWKVPLPSLAEPFYSTAKSAEPMAVYVWKNAFWGVDHQWEGNLFATAGAQVNIWDHNRSQPVNSFEWGTDTFISLRFNPGEPNVFVTSASDRSITLYDLRMSLPARKVIMMTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKDHVSAVMDVDFSPTGREFVTGSYDRTIRIFNYNGGHSRELYHTKRMQRVFCVKFSCDASYVISGSDDTNLRLWKAKASEQLGVLLPRERRKHEYHEAVKNRYKHLHDIKRIVSEELMRCMHFDGDCEQVQLRENFYAGVCPNVETIVRNAVAKKFNETFVTVPATLRLYFHDCFVQGCDASIIIASTPTNTAEKDYPDNLSLAGDGFDTVIKAKAAVDANPQCTNKVSCADILAMAARDVIALAGGPSYQVELGRLDGLVSRASDVKGKLPQPGFNLNQLNAMFNANGLTQQDMIALSAAHTVGFSHCSKFSNRIFNFSRTQQVDPTLNKDYATQLQQMCPINVDPTIAVNMDPITPQKFDIQYFRNLQQGKGLFTSDQVLFTDPRSRSTVKVWAKRTPIFSDAFISAITKMGRIGVKTGSNGNIRRDCGVFNS 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 16011312 16027887 + BLOR13991 Blo04g01079 60107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01079 750 ProSiteProfiles Trp-Asp (WD) repeats profile. 358 399 IPR001680 GO:0005515
Blo04g01079 750 ProSiteProfiles Trp-Asp (WD) repeats profile. 315 356 IPR001680 GO:0005515
Blo04g01079 750 ProSitePatterns Peroxidases proximal heme-ligand signature. 609 619 IPR019793 -
Blo04g01079 750 CDD secretory_peroxidase 446 748 IPR033905 GO:0004601|GO:0042744
Blo04g01079 750 ProSiteProfiles Trp-Asp (WD) repeats profile. 62 96 IPR001680 GO:0005515
Blo04g01079 750 PANTHER NUCLEOTIDE BINDING 130 430 - -
Blo04g01079 750 Gene3D - 178 421 IPR015943 GO:0005515
Blo04g01079 750 PANTHER U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN 130 430 - -
Blo04g01079 750 Pfam WD domain, G-beta repeat 312 347 IPR001680 GO:0005515
Blo04g01079 750 Pfam WD domain, G-beta repeat 361 390 IPR001680 GO:0005515
Blo04g01079 750 Pfam WD domain, G-beta repeat 131 167 IPR001680 GO:0005515
Blo04g01079 750 Pfam WD domain, G-beta repeat 62 95 IPR001680 GO:0005515
Blo04g01079 750 Gene3D - 32 171 IPR015943 GO:0005515
Blo04g01079 750 ProSiteProfiles Trp-Asp (WD) repeats profile. 135 168 IPR001680 GO:0005515
Blo04g01079 750 ProSitePatterns Peroxidases active site signature. 478 489 IPR019794 GO:0004601
Blo04g01079 750 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 315 347 - -
Blo04g01079 750 SMART WD40_4 128 167 IPR001680 GO:0005515
Blo04g01079 750 SMART WD40_4 183 219 IPR001680 GO:0005515
Blo04g01079 750 SMART WD40_4 222 262 IPR001680 GO:0005515
Blo04g01079 750 SMART WD40_4 349 390 IPR001680 GO:0005515
Blo04g01079 750 SMART WD40_4 55 95 IPR001680 GO:0005515
Blo04g01079 750 SMART WD40_4 308 347 IPR001680 GO:0005515
Blo04g01079 750 SMART WD40_4 268 304 IPR001680 GO:0005515
Blo04g01079 750 ProSiteProfiles Plant heme peroxidase family profile. 446 749 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 Pfam Sof1-like domain 391 428 IPR007287 -
Blo04g01079 750 PRINTS Haem peroxidase superfamily signature 543 560 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Haem peroxidase superfamily signature 478 492 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Haem peroxidase superfamily signature 561 573 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Haem peroxidase superfamily signature 609 624 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Haem peroxidase superfamily signature 669 684 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 Gene3D Peroxidase, domain 2 587 728 - -
Blo04g01079 750 SUPERFAMILY WD40 repeat-like 58 390 IPR036322 GO:0005515
Blo04g01079 750 PRINTS G protein beta WD-40 repeat signature 377 391 IPR020472 -
Blo04g01079 750 PRINTS G protein beta WD-40 repeat signature 82 96 IPR020472 -
Blo04g01079 750 PRINTS G protein beta WD-40 repeat signature 154 168 IPR020472 -
Blo04g01079 750 PRINTS Plant peroxidase signature 480 500 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Plant peroxidase signature 521 534 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Plant peroxidase signature 542 552 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Plant peroxidase signature 683 700 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Plant peroxidase signature 561 576 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Plant peroxidase signature 608 620 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Plant peroxidase signature 667 682 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Plant peroxidase signature 723 736 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 PRINTS Plant peroxidase signature 456 475 IPR000823 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 135 168 - -
Blo04g01079 750 Gene3D - 450 749 - -
Blo04g01079 750 PANTHER U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN 1 100 - -
Blo04g01079 750 Pfam Peroxidase 463 712 IPR002016 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 62 96 - -
Blo04g01079 750 PANTHER NUCLEOTIDE BINDING 1 100 - -
Blo04g01079 750 SUPERFAMILY Heme-dependent peroxidases 446 749 IPR010255 GO:0004601|GO:0006979|GO:0020037
Blo04g01079 750 ProSitePatterns Trp-Asp (WD) repeats signature. 82 96 IPR019775 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g01079 Blo05g00841 CCT
Blo04g01079 Blo16g00359 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01079 Blo-Chr4:16011312 Blo05g00841 Blo-Chr5:30359301 1.31E-166 dispersed
Blo13g00332 Blo-Chr13:19048978 Blo04g01079 Blo-Chr4:16011312 5.05E-50 transposed
Blo17g00340 Blo-Chr17:3578702 Blo04g01079 Blo-Chr4:16011312 3.91E-86 transposed
Blo16g00359 Blo-Chr16:10972857 Blo04g01079 Blo-Chr4:16011312 2.22E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01079 K11806 - sind:105178473 707.212