Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01115 ATGGCTACAAACAACTTCGCAAACGAGAGGAAGCTCGGCCGAGGAGGTTTCGGTTCTGTATACAGAGGCTACCTTGCTGACATGGACATGATAGTGGCCGTGAAGAAAATATCAAGGAATTCTAAACAGGGGAAAAAAGAATACATGACGGAGGTGAAGATAATCAGCTGGTTACGTCACCGGAATCTGGTGAAACTGGTCGGATGGTGCCACAATAAAGGCGAGTTCCTTCTTGTTTACGAGTTGCTGCCCAACTGTAGCCTTGATTCTCATCTCTTTGGGAAAAGAAACCCTCTTCAATGGAGTGTGAGGTACAAAATCTCACTGGGTTTGGCCTCTGCGCTGCTTTATCTACACGAAGAGTCGGAGCAATGCATAGTTCATCGAGATATTAAATCAAGGCTCGCCGGAACTTTAGGCTACTTAGCACCGGAGTATATAAGCACAGGGAGAGCTAGTAAAGAGTCTGATGTGTTCAGCTTCGGTGTGGTGGCTTTAGAAATCATCATCGGGAAAAAGTCGGTTTCCGTAATTAAGGATTCCGATCAAGGTCTGGTAGAATGGGTTTGGGATCTTTATGGGAAAGGAGAGCTTCTATCAACCTTGGACGGCGGAATGCGATCGAATTTCAATGGGAGGGAGGTGGAGTGTTTGACGACTGTGGGACTGTGGTGTGCGTATCCAGAATAA 690 46.52 MATNNFANERKLGRGGFGSVYRGYLADMDMIVAVKKISRNSKQGKKEYMTEVKIISWLRHRNLVKLVGWCHNKGEFLLVYELLPNCSLDSHLFGKRNPLQWSVRYKISLGLASALLYLHEESEQCIVHRDIKSRLAGTLGYLAPEYISTGRASKESDVFSFGVVALEIIIGKKSVSVIKDSDQGLVEWVWDLYGKGELLSTLDGGMRSNFNGREVECLTTVGLWCAYPE 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17670383 17671165 + BLOR14027 Blo04g01115 60143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01115 229 Pfam Protein kinase domain 7 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01115 229 PANTHER - 134 229 - -
Blo04g01115 229 PANTHER - 2 133 - -
Blo04g01115 229 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Blo04g01115 229 ProSiteProfiles Protein kinase domain profile. 6 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01115 229 Pfam Protein tyrosine and serine/threonine kinase 140 179 IPR001245 GO:0004672|GO:0006468
Blo04g01115 229 Gene3D Transferase(Phosphotransferase) domain 1 83 133 - -
Blo04g01115 229 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 134 229 - -
Blo04g01115 229 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 2 133 - -
Blo04g01115 229 Gene3D Transferase(Phosphotransferase) domain 1 134 229 - -
Blo04g01115 229 ProSitePatterns Protein kinases ATP-binding region signature. 12 36 IPR017441 GO:0005524
Blo04g01115 229 SUPERFAMILY Protein kinase-like (PK-like) 2 193 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01115 Blo-Chr4:17670383 Blo07g01406 Blo-Chr7:34097301 7.49E-67 dispersed
Blo04g01115 Blo-Chr4:17670383 Blo04g01117 Blo-Chr4:17701918 5.35E-153 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84269 PF00069 Pkinase 4.10E-24 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01115 - - cpap:110809045 342.813