Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g01118 | ATGGAGAAAAAATACAGCTTTTGGCAATGGGGTTTGATGCTTTGCTTCTTATCAATGGCTGCCTTTGTTGTACTCCGGCTTCCGGAATTCTCCACGAAGACAGCAGTCAGGAGATCTCTGAGGAACACAAACAGCAGCGGCGCCGTCGTATTTCCTGCAGTGACGCTTCGAAGATTATCTCACGGCTATGTGGTGATGGATAATGGGCTTCTGCAAGTCACTTTATCAACTCCGAGCGGCCATGTCACCGGTGTAAAGCACAACGGGATCGACAACTTGCTTGAAGTTCATAATTCAGCCGACGATAGAGGATTAAGAGGAACAAACTTTAGTGTTGTAGTGCAAACTGAAGACCAGTTGGAGCTTTCATTCACACGAACATGGACAAATTCATCTAGTAATACCAATCTTCCTCTAAATGTAGACAAAAGGTACATATTGCTACGTGGGTCTTCTGGGTTTTATACGTACTCCATATTAGAGAGGCTACAAGGATGGCCAGCGATTGAGATGGATCAAATCCGAGCTGTTTATAAATCCCGGAAGGAAAAATTTCGCTACATGGCGGTAGCGGATGACATGCAGAGGATCATGCCGACGCAGCAGGATCGGGAGACCGGGGATAAGCTGGCTTATCCAGAGGCTGTTCTTTTAACCAACCCTGTGGATGAAGACGTGAGAGGAGAGGTGGATGATAAGTACATGTACTCGCTTGAGGATAAAGATAACAAAGTTCATGGCTGGATATGTGCGGACCCACCGACTGGAATCTGGATGATCACGCCCAGCGATGAGTTCCGCGTGGCGGGGCCTGTCAAGCAGGATCTTACCTCTCATGTCGGCCCTACCACCCTCTCTATGTTTGTGAGTACCCATTATGCCGGGAAGGACGTGGGGATGCACTTTGGTGAAGGGGAGCCATGGAAGAAGGTTTTCGGCCCGGTTTTCGTCTATCTCAACTCTCTTCCAGAAAAAGCAGACCCTCTTGATCTCTGGGACGACGCTAAACAGCAGATGGGGAAAGAAGTGGATAGCTGGCCTTACAGTTTTCCTGAGTCGGCGGAATTTCCTACTTCTGAACAACGAGGAAGAGTGAGCGGTCAATTGCTAGTCCGTGATCGATACATTAATGAATCCCTCATTTCTGCTGATGAAGCATATGTTGGACTGGCATTGCCTGGAGATTTGGGATCCTGGCAAAGAGAAAGCAAGGGTTATCAGTTCTGGACACGAGCGGACAAAGACGGCAACTTTTCCATTAAAAATGTTAGACCTGGGACATACAATTTGTACGCTTGGGTCCCTGGCTTTATCGGAGATTACAAATATGAGAATAATATAACAGTCGAACCCGGAAATGCAATAGGCTTAGACAACCTCGTGTTCGAGCCTCCTCGACAGGGTCCAACCTTCTGGGAAATTGGCATCCCCGACCGAACTGCAGCCGAGTTTTTCGTGCCAAACCCCTACCCGACTCTCATGAATCGACTGTACTACCAACCGAAAAACAATTTTAGGCAATATGGCTTGTGGGAACGTTATGCCGATTTGTATCCAACGGCCGATCTGGTCCACAACATCGGCGATAATTATAGAACCGACTGGTTCTTCGCTCATGTTACCAGAAAAAACGAAAATGGAACTTACGACGCAACGACTTGGCAGATCGTATTTCAACTCGACACTTTGAACAAGTCTGGAACTTATACACTTCAATTGGCGTTAGCCTCTGCCACAGAATCTGAAGTGCAGGTACGGTGGAACGACCCGGCTGCAGAGCCTCACTTTTCAACCGGATTAATAGGGAAGGATAATGCGATTGCGAGACATGGAATTCACGGGCTGTACTGGTTGTACACTGTAAATGTAGGCGGCCAAATGCTTGCTTTAGGGAAGAACACAATCTACCTGACTCAATCCAGACATCAAACTCCTTTCCAAGGAGTAATGTATGACTACATTCGATTTGAAGGGCCGCCTACTTGA | 1986 | 47.38 | MEKKYSFWQWGLMLCFLSMAAFVVLRLPEFSTKTAVRRSLRNTNSSGAVVFPAVTLRRLSHGYVVMDNGLLQVTLSTPSGHVTGVKHNGIDNLLEVHNSADDRGLRGTNFSVVVQTEDQLELSFTRTWTNSSSNTNLPLNVDKRYILLRGSSGFYTYSILERLQGWPAIEMDQIRAVYKSRKEKFRYMAVADDMQRIMPTQQDRETGDKLAYPEAVLLTNPVDEDVRGEVDDKYMYSLEDKDNKVHGWICADPPTGIWMITPSDEFRVAGPVKQDLTSHVGPTTLSMFVSTHYAGKDVGMHFGEGEPWKKVFGPVFVYLNSLPEKADPLDLWDDAKQQMGKEVDSWPYSFPESAEFPTSEQRGRVSGQLLVRDRYINESLISADEAYVGLALPGDLGSWQRESKGYQFWTRADKDGNFSIKNVRPGTYNLYAWVPGFIGDYKYENNITVEPGNAIGLDNLVFEPPRQGPTFWEIGIPDRTAAEFFVPNPYPTLMNRLYYQPKNNFRQYGLWERYADLYPTADLVHNIGDNYRTDWFFAHVTRKNENGTYDATTWQIVFQLDTLNKSGTYTLQLALASATESEVQVRWNDPAAEPHFSTGLIGKDNAIARHGIHGLYWLYTVNVGGQMLALGKNTIYLTQSRHQTPFQGVMYDYIRFEGPPT | 661 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 17836789 | 17840645 | + | BLOR14030 | Blo04g01118 | 60146 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g01118 | 661 | SUPERFAMILY | Starch-binding domain-like | 404 | 458 | IPR013784 | GO:0030246 | |
Blo04g01118 | 661 | Gene3D | - | 358 | 458 | - | - | |
Blo04g01118 | 661 | CDD | RGL4_N | 63 | 321 | - | - | |
Blo04g01118 | 661 | SUPERFAMILY | Galactose-binding domain-like | 468 | 657 | IPR008979 | - | |
Blo04g01118 | 661 | Pfam | Polysaccharide lyase family 4, domain III | 470 | 655 | IPR029411 | - | |
Blo04g01118 | 661 | SUPERFAMILY | Galactose mutarotase-like | 67 | 321 | IPR011013 | GO:0003824|GO:0005975|GO:0030246 | |
Blo04g01118 | 661 | Gene3D | - | 468 | 656 | - | - | |
Blo04g01118 | 661 | Pfam | Rhamnogalacturonate lyase family | 42 | 230 | IPR010325 | - | |
Blo04g01118 | 661 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 53 | 660 | - | - | |
Blo04g01118 | 661 | CDD | RGL4_M | 361 | 460 | IPR029413 | - | |
Blo04g01118 | 661 | Pfam | Polysaccharide lyase family 4, domain II | 384 | 455 | IPR029413 | - | |
Blo04g01118 | 661 | CDD | RGL4_C | 472 | 657 | - | - | |
Blo04g01118 | 661 | Gene3D | - | 53 | 312 | IPR014718 | GO:0030246 | |
Blo04g01118 | 661 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 53 | 660 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g01118 | Blo-Chr4:17836789 | Blo12g00739 | Blo-Chr12:25750097 | 0 | dispersed | |
Blo04g01118 | Blo-Chr4:17836789 | Blo17g00101 | Blo-Chr17:848563 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g01118 | K18195 | - | jre:109003646 | 852.432 |