Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01119 ATGGCCAAGTCACCGGAGACAGAGCACGCAAACAAGGCCTTTGGATGGGCTGCCAGAGACACCTCTGGCGTTCTTTCCCCTTTCCATTTCTCTCGAAGGAAGGCGGGTGAGAAAGATGTGGCGTTCAAAGTGCTTTACTGTGGAATTTGTCACAGCGACCTTCACATGGTGAAAAACGAATGGGGCAGTTCCATCTATCCTCTTGTTCCTGGGCATGAAATAGTGGGAGTAGTGACTGAAGTTGGGAAGAAAGTAGAAAAATTCAAAGTTGGAGACAGAGTGGGCGTGGGTTGTATGGTAGGATCGTGCCGCTCTTGTGGCAGCTGTGCGCAAGACCTCGAAAACTACTGCCCCAAAATGATTCTCACCTATTCAGCAAAAGACTCTGATGGAACGATCACGTACGGAGGCTACTCCGACCACATGGTGGCCGATGAACACTTCATTGTCCGCATCCCAGACGGCCTCCCTCTCGACGCATCTGCACCGCTCCTCTGTGCTGGCATCACCGTTTATAGCCCGTTGAGGTATTACGGCCTCGATAAGCCCGGCATGCATATCGGTATAGTTGGCCTGGGCGGGCTCGGCCATGTGGGCGTCAAGTTTGCCAAGGCTTTTGGTGCGAAGGTCACTGTGATTAGTACTTCCCCTGCTAAAAAAGAGGAGGCTATTCAACGTCTTGGCGCTGACTCCTTTTTGGTTAGCCGGGACCACACCCAAATGCAGGCTGAAACGGGCACATTTGATGGTATCATTGACACTGTGTCGGCTGCCCACCCTCTTGTGCCGCTAATTGGTTTGCTGAAGCCACACGGGAAGCTTGTCATGGTCGGTGCTCCGGAGAAGCCATTGGAGCTTCCAGCCTTCCCCCTGCTCATGGGGAGGAAATTAGTGGGTGGTAGCTGCATTGGGGGAATCAAGGAGACTCAAGAGATGATCGATTTTGCAGCCAAGCAGGGCATCAAGGCCGATGTCGAGGTCATTCAGATGGAGTACGTGAATGAGGCCATGGCTCGGATGCTGAAAGCAGACGTGAAATATCGGTTCGTCCTGGACGTGGGCAACACCTTGAAGTCTAGGGCTTAG 1086 52.85 MAKSPETEHANKAFGWAARDTSGVLSPFHFSRRKAGEKDVAFKVLYCGICHSDLHMVKNEWGSSIYPLVPGHEIVGVVTEVGKKVEKFKVGDRVGVGCMVGSCRSCGSCAQDLENYCPKMILTYSAKDSDGTITYGGYSDHMVADEHFIVRIPDGLPLDASAPLLCAGITVYSPLRYYGLDKPGMHIGIVGLGGLGHVGVKFAKAFGAKVTVISTSPAKKEEAIQRLGADSFLVSRDHTQMQAETGTFDGIIDTVSAAHPLVPLIGLLKPHGKLVMVGAPEKPLELPAFPLLMGRKLVGGSCIGGIKETQEMIDFAAKQGIKADVEVIQMEYVNEAMARMLKADVKYRFVLDVGNTLKSRA 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 17892029 17894211 + BLOR14031 Blo04g01119 60147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01119 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Blo04g01119 361 PANTHER ALDEHYDE REDUCTASE 2 358 - -
Blo04g01119 361 Gene3D - 16 353 - -
Blo04g01119 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Blo04g01119 361 PANTHER LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE 2 358 - -
Blo04g01119 361 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Blo04g01119 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Blo04g01119 361 Gene3D - 167 323 - -
Blo04g01119 361 CDD CAD1 14 352 - -
Blo04g01119 361 SUPERFAMILY GroES-like 20 184 IPR011032 -
Blo04g01119 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00785 Blo-Chr3:32702091 Blo04g01119 Blo-Chr4:17892029 1.37E-29 dispersed
Blo04g00973 Blo-Chr4:12183123 Blo04g01119 Blo-Chr4:17892029 4.63E-169 dispersed
Blo04g01119 Blo-Chr4:17892029 Blo17g00729 Blo-Chr17:22228439 5.35E-135 dispersed
Blo16g00317 Blo-Chr16:8094171 Blo04g01119 Blo-Chr4:17892029 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01119 - K23232 tcc:18611430 590.882