Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g01123 | ATGGCTCCGGCGACTAACTGGCTCTCATTCTCTTTATCTCCGGTTGAAATGCTGAGGTCTTCTCCTGAATCTCAATTTATGCCTTACGACACCTCTTCCACTGCTTCTCATCACTACTTGTTCGATAACATCTACAGAAATGGTTGGGGAAACCCCAAACAAGCTCAAGCTTCAGGTAGTATCGCCGATTCACCTAGTCTGACTAGCTTCATCGACCACCATAGCCAAAACCAAGGAGCACCGAAACTGGAAGACTTTCTCGGCGAGTCGTCGCTAATGGTTCGATATTCCGATAGCCAAACGGAAACTCAAGAATCATCTTTAACTCAAATCTATGACCATGGTTCGACCTACTTCAACGACCAGCAAGATCTCAAAGCTGTTACAGGGTTTCAAGCTTTCTCAGCCAACTCAGGTTCGGAAGTGGACGACTCGGCATCTATCGCTCGGAACCAGCTCGCTTGCGGCGAGTTCGCCGGCCATTGTATTGAATCGTCCGGCACCGAGTTAGCCTTCACTAATTGTTCTACCGGTGCACTGTCACTCGGGGTTGCTCAGAGCTTGGAAAGAGCGGTTGTTTCGATAGAATCTGATTGCTCGAAGAAGATTGTTGATACATTTGGCCAGCGAACTTCGATTTACAGAGGCGTTACTCGACACAGATGGACTGGTAGATACGAAGCTCATCTATGGGATAACAGTTGTCGAAGAGAAGGTCAGGCTAGGAAAGGGCGTCAAGTTCATTTGGTCTGCTTGCTGATGCTTACATTCTCTATCTTTTTGCATGAACTTGGTGTAATTTCCATGGCTGTCTTCCATCTTCCAACCTCCTCCTCTGCAGTTTACTTGGGTGGATATGATAAAGAAGATAACGCAGCGAGGGCTTATGATCTGGCAGCTTTGAAATACTGGGGTCCCACTGCCACTACCAACTTTTCTGTAGTTTCAAATTACACCAAAGAACTGGAGGAAATGAAACATGTGACAAAGCAAGAATTCATTGCTTCTCTTCGAAGGAAAAGTAGTGGGTTTTCAAGGGGAGCTTCGATTTATCGAGGCGTGACAAGGCATCATCAACAGGGAAGGTGGCAAGCGAGAATAGGCCGAGTTGCTGGAAATAAGGATCTGTACCTCGGGACATTTGCGACTGAAGAGGAAGCGGCTGAAGCTTACGATATTGCAGCTATAAAGTTCAGAGGTTTAAATGCAGTCACAAACTTTGAGATGGGACGATATGATGTGGAAGCAATTTCAAAGAGCAATCTCCCCATAGGAGGAGCTGCAAAAAGGTTAAAGCTCTCACTCGAATCGGAGCAAAAGTCATCCATTATGCACCATAATTTACAGTCATCGAGCATTAGCGGCGGAAACAACATAAGTTTCGGTGCAATTGAACCTGTTTCGGCTATTACATGTGGACTGCCGTTCGAAGCTTCTACTTCTCCAATGCTTTATCATCATAATGTCTTCCTCCACCTCCAACCCAATAGCATTTGCACTTCCAGTTTGGCTTCTAACCCTACCATGGCAGCTCCAACGAATGCGATGGCACCGCAGCCAGAATTTTTTGTTTGGCCTCACCAGTCCTATTGA | 1593 | 46.2 | MAPATNWLSFSLSPVEMLRSSPESQFMPYDTSSTASHHYLFDNIYRNGWGNPKQAQASGSIADSPSLTSFIDHHSQNQGAPKLEDFLGESSLMVRYSDSQTETQESSLTQIYDHGSTYFNDQQDLKAVTGFQAFSANSGSEVDDSASIARNQLACGEFAGHCIESSGTELAFTNCSTGALSLGVAQSLERAVVSIESDCSKKIVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVHLVCLLMLTFSIFLHELGVISMAVFHLPTSSSAVYLGGYDKEDNAARAYDLAALKYWGPTATTNFSVVSNYTKELEEMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGLNAVTNFEMGRYDVEAISKSNLPIGGAAKRLKLSLESEQKSSIMHHNLQSSSISGGNNISFGAIEPVSAITCGLPFEASTSPMLYHHNVFLHLQPNSICTSSLASNPTMAAPTNAMAPQPEFFVWPHQSY | 530 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 18182477 | 18186168 | - | BLOR14035 | Blo04g01123 | 60151 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g01123 | 530 | CDD | AP2 | 349 | 408 | IPR001471 | GO:0003700|GO:0006355 | |
Blo04g01123 | 530 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 284 | 527 | - | - | |
Blo04g01123 | 530 | CDD | AP2 | 212 | 312 | IPR001471 | GO:0003700|GO:0006355 | |
Blo04g01123 | 530 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 | 189 | 246 | - | - | |
Blo04g01123 | 530 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 | 5 | 185 | - | - | |
Blo04g01123 | 530 | ProSiteProfiles | AP2/ERF domain profile. | 350 | 408 | IPR001471 | GO:0003700|GO:0006355 | |
Blo04g01123 | 530 | ProSiteProfiles | AP2/ERF domain profile. | 213 | 313 | IPR001471 | GO:0003700|GO:0006355 | |
Blo04g01123 | 530 | Pfam | AP2 domain | 350 | 400 | IPR001471 | GO:0003700|GO:0006355 | |
Blo04g01123 | 530 | SUPERFAMILY | DNA-binding domain | 277 | 314 | IPR016177 | GO:0003677 | |
Blo04g01123 | 530 | SMART | rav1_2 | 350 | 414 | IPR001471 | GO:0003700|GO:0006355 | |
Blo04g01123 | 530 | SMART | rav1_2 | 213 | 319 | IPR001471 | GO:0003700|GO:0006355 | |
Blo04g01123 | 530 | MobiDBLite | consensus disorder prediction | 53 | 76 | - | - | |
Blo04g01123 | 530 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 | 284 | 527 | - | - | |
Blo04g01123 | 530 | SUPERFAMILY | DNA-binding domain | 349 | 409 | IPR016177 | GO:0003677 | |
Blo04g01123 | 530 | MobiDBLite | consensus disorder prediction | 53 | 78 | - | - | |
Blo04g01123 | 530 | Gene3D | AP2/ERF domain | 213 | 315 | IPR036955 | GO:0003700|GO:0006355 | |
Blo04g01123 | 530 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 189 | 246 | - | - | |
Blo04g01123 | 530 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 5 | 185 | - | - | |
Blo04g01123 | 530 | Gene3D | AP2/ERF domain | 350 | 409 | IPR036955 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g01123 | Blo-Chr4:18182477 | Blo08g00468 | Blo-Chr8:10549400 | 2.92E-115 | dispersed | |
Blo16g00310 | Blo-Chr16:7708927 | Blo04g01123 | Blo-Chr4:18182477 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12349 | PF00847 | AP2 | 2.10E-10 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g01123 | K09285 | - | qsu:112018242 | 686.411 |