Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo04g01131 | ATGGGTCTGGCATTGGAGAGCGAAGAAACTGTGCGAAAGATGTTAGAGAGAGAGAAAGAGCATTTACCCAGAAAGGATTATCTCAGAAGACTTCGAAATGGAGATTTAGATTTGAGCATCAGAAGAGAGGCTGTTGATTGGATTTGGAAGGCGTATTCTCAGAACAGTTTTGGACCATTGAGCATCTGTCTATCTCTAAACTACTTGGATCGATTTCTCTCAGTTCATGAAATCCCAAGAGATAAAAGCTGGGTTGTGCAACTGTTAGCTGTAGCTTGCCTATCTCTCGCAGCAAAAATGGAGGAGACTAATGTGCCTCATTGTAGTGAAATTCAAGTGGGAGACCCAGAATTTGTGTTTGAATCTAAAACTATTCAAAGAATGGAGCTTCTGATTCTGAATGCTCTAGGATGGAGGATGCAGCCAATAACACCTTGTTCTTATATCGATTACTTTCTGGAGAAGATGATAGATGGTCAACACCCATCTTTATTTCCCATATCTAAATCACTACAACTCATATTAAACACTAGCAAAGGAATTGACTTCTTAGAATTCCGGCCATCGGAGATCGCTGCAGCTGTTGCAAGTTATGTTTCCGGAGAAGTATATGCAGTGAAGATCGATGATGCTCTGGCTTCTCTTGTTCATATAGAAAAGGGGAGGGTGAAGAAATGTGTTGAACTGATGAAGGATCTGTCACTGGGCAGTGGATCTTGGCCAGCCCCTTCTTCTTCTTCATCTTCTTCTTCCTCAGTGGTTGAAAGTCCAGTTGGGGTGTTGGAAGGTCCATGCTTGAGCTATAAAAGTGATGAGATAACAGTTGGGTTGTCTGCAGATTCTTCACACAATAGTTCAGACAATAATAGGATGGAACCAAATAAGCCATCTTTACAAGATTTCTGCCCCAAGTCATGA | 918 | 41.61 | MGLALESEETVRKMLEREKEHLPRKDYLRRLRNGDLDLSIRREAVDWIWKAYSQNSFGPLSICLSLNYLDRFLSVHEIPRDKSWVVQLLAVACLSLAAKMEETNVPHCSEIQVGDPEFVFESKTIQRMELLILNALGWRMQPITPCSYIDYFLEKMIDGQHPSLFPISKSLQLILNTSKGIDFLEFRPSEIAAAVASYVSGEVYAVKIDDALASLVHIEKGRVKKCVELMKDLSLGSGSWPAPSSSSSSSSSVVESPVGVLEGPCLSYKSDEITVGLSADSSHNSSDNNRMEPNKPSLQDFCPKS | 305 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 18443841 | 18445251 | + | BLOR14043 | Blo04g01131 | 60159 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo04g01131 | 305 | Gene3D | - | 24 | 141 | - | - | |
| Blo04g01131 | 305 | MobiDBLite | consensus disorder prediction | 277 | 305 | - | - | |
| Blo04g01131 | 305 | ProSitePatterns | Cyclins signature. | 41 | 72 | IPR006671 | - | |
| Blo04g01131 | 305 | SMART | Cyclin_C_2 | 143 | 257 | IPR004367 | - | |
| Blo04g01131 | 305 | SUPERFAMILY | Cyclin-like | 7 | 140 | IPR036915 | - | |
| Blo04g01131 | 305 | MobiDBLite | consensus disorder prediction | 277 | 295 | - | - | |
| Blo04g01131 | 305 | PANTHER | CYCLINS | 2 | 295 | IPR039361 | - | |
| Blo04g01131 | 305 | Pfam | Cyclin, N-terminal domain | 12 | 140 | IPR006671 | - | |
| Blo04g01131 | 305 | SMART | cyclin_7 | 46 | 134 | IPR013763 | - | |
| Blo04g01131 | 305 | CDD | CYCLIN | 41 | 133 | IPR013763 | - | |
| Blo04g01131 | 305 | Pfam | Cyclin, C-terminal domain | 143 | 235 | IPR004367 | - | |
| Blo04g01131 | 305 | PANTHER | CYCLIN-D4-1-LIKE | 2 | 295 | - | - | |
| Blo04g01131 | 305 | SUPERFAMILY | Cyclin-like | 125 | 233 | IPR036915 | - | |
| Blo04g01131 | 305 | Gene3D | - | 12 | 228 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo03g00066 | Blo-Chr3:2436702 | Blo04g01131 | Blo-Chr4:18443841 | 1.33E-52 | dispersed | |
| Blo04g01131 | Blo-Chr4:18443841 | Blo17g00102 | Blo-Chr17:913786 | 3.56E-87 | dispersed | |
| Blo05g00746 | Blo-Chr5:26607932 | Blo04g01131 | Blo-Chr4:18443841 | 4.13E-43 | dispersed | |
| Blo05g00837 | Blo-Chr5:30248677 | Blo04g01131 | Blo-Chr4:18443841 | 8.26E-38 | dispersed | |
| Blo04g01131 | Blo-Chr4:18443841 | Blo04g01267 | Blo-Chr4:26093449 | 6.39E-45 | wgd | |
| Blo04g01131 | Blo-Chr4:18443841 | Blo06g00063 | Blo-Chr6:1806417 | 8.06E-104 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo04g01131 | K18810 | - | tcc:18611480 | 369.007 |