Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01166 ATGGAGGGCAACCAGCCAGCTCAATCATCTTCATACCCGACGACTCAGCCTCCTCCTCCGCCGTCTCAATTTCACCATCTTCTCCAGCAGCAACAGCAGCAGCTCCAGATGTTCTGGTCCTACCATCGCCAAGAAATCGAACAGGTTAATGAGTTCAAAAACCACCAGCTCCCCCTTGCTCGAATCAAGAAGATTATGAAGGCCGATGAGGACGTCCGTATGATCTCCTCCGAAGCCCCGATTTTGTTTGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACGATTAGGTCCTGGCTTCATGCGGAGGAAAACAAGAGGAGGACTCTACAGAAGAATGATATATCGGCGGCGATTACGAGGACTGATATCTTCGATTTTTTGGTTGATATTGTTCCGAGAGATGAGATCAAGGATGAGGGTGGGTTGGAAGGTGTGGTTGGGGCTACTGCTAGTGGCTTACCGTACTATTACCCTCCTTTAGGGCAGCCGGCGGGGGCTCCAGCTGGGATGATGATCGGGAGGCCGGCCATGGATTCCACTGGAATGTACATGCAGCCTCCGTCTCAGGCGTGGCAGTCAGTATGGCAGACTCCGCCGGAAGATGGGACATATGGGAGTGGGGGAAACAGCGGACTTGGCAATCTTAATGGACAAAGTCATTTTGAAGGGCTGTTGATCTACTGTGTTTTGTTCACTAATGGTAAGAAAACAACGGGCCGAGCTGTAACCGAGCGGGCTCGGCCCGGGCCCGGGCCCGGTAGGCGGGCCGAGCCGAGCCCGCAACCCCTGGCTCGCGAGCCCGCCCGCCAGGATCCTGGCGATCCGGCGGTCCCAGCCCAGACTGACTCCCAGTCTGGGAGTGGGACTCCCGTCTCCCAGTTGGCCTCGGCCAGTCCTAGAGTCTCCCGAAGAGTCGAAGACGATGGCGATGGCGAAGAGTCGAAGACGATGGCGATGGAGAGTGAGAGTTGGGACTCTCACAGAGAGTCGTCGACTCTCTCTAGAGTGTCGACTCTCTCTGTGAGACTCACCGACGGTGAGACTCTCACAGAGAGTGTCGACTCTCTCAGAGAGAGCAGAGCCGGAGCGTCGACTCTCACTCACTGTGAGAGTCGAGCTCTGCTCTTTGCAACGGTCTTCCGACTGTTGCAAAGCAATTGCAACGGTCCGAAGACCGTTGGTGGTGTTGGCAAGAATGGCAACGGTCCAGTGACCGTTGCCTTCGGCCTTCCCCCTGTCCCCTTCCCCCCGTTGGCGAGGCGAGTGGGGGGGCGTTGCTTGCTTCTCTGTGTGATCACAGAGAAGCAACGCCGCAACGGTCTTCAGACCGTTGCAATTGCAACGGTCTGA 1353 56.69 MEGNQPAQSSSYPTTQPPPPPSQFHHLLQQQQQQLQMFWSYHRQEIEQVNEFKNHQLPLARIKKIMKADEDVRMISSEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDISAAITRTDIFDFLVDIVPRDEIKDEGGLEGVVGATASGLPYYYPPLGQPAGAPAGMMIGRPAMDSTGMYMQPPSQAWQSVWQTPPEDGTYGSGGNSGLGNLNGQSHFEGLLIYCVLFTNGKKTTGRAVTERARPGPGPGRRAEPSPQPLAREPARQDPGDPAVPAQTDSQSGSGTPVSQLASASPRVSRRVEDDGDGEESKTMAMESESWDSHRESSTLSRVSTLSVRLTDGETLTESVDSLRESRAGASTLTHCESRALLFATVFRLLQSNCNGPKTVGGVGKNGNGPVTVAFGLPPVPFPPLARRVGGRCLLLCVITEKQRRNGLQTVAIATV 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20154829 20156950 + BLOR14078 Blo04g01166 60194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01166 450 MobiDBLite consensus disorder prediction 239 340 - -
Blo04g01166 450 MobiDBLite consensus disorder prediction 1 24 - -
Blo04g01166 450 Gene3D Histone, subunit A 22 134 IPR009072 GO:0046982
Blo04g01166 450 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 56 119 IPR003958 -
Blo04g01166 450 MobiDBLite consensus disorder prediction 278 300 - -
Blo04g01166 450 MobiDBLite consensus disorder prediction 302 330 - -
Blo04g01166 450 SUPERFAMILY Histone-fold 18 128 IPR009072 GO:0046982
Blo04g01166 450 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 219 - -
Blo04g01166 450 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 4 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00467 Blo-Chr4:3880174 Blo04g01166 Blo-Chr4:20154829 1.32E-69 dispersed
Blo04g01166 Blo-Chr4:20154829 Blo11g00489 Blo-Chr11:4507897 1.49E-56 dispersed
Blo01g00358 Blo-Chr1:4246554 Blo04g01166 Blo-Chr4:20154829 8.01E-08 transposed
Blo16g00273 Blo-Chr16:6419976 Blo04g01166 Blo-Chr4:20154829 8.35E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12352 PF00808 CBFD_NFYB_HMF 1.90E-17 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01166 - - csv:101213576 318.931