Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01171 ATGACTACCACGACCACTAATGTTGGCGGAGGTGATGAGGATAGGGTTATGGCCGCTGCGCAGCAGATCTTGAAGAGTCTTAATGCTCCGAAGGAGGTTAGGGAAGACATGCTTTTGATCTTCTCGAATTTCGATAATCGTCTCTCGAATATCACTCAGTTGATCAATAGCGAGGATGTGAAGAACGAGGACCGTTATGAAGCGGCAGAAAAGGTGATTCTTCGCTGGGAGTCCAATTCCGATGCTTTGAGGAATTCTCTTCATTGGGAGGAGTCGCCGGATGAGGCGGCTGAATATTTATCTGCTGTGGATGAAGTGCTCCAGTTGATTGAAGATCTTTCACTTCGGTCAGAATCTTCGGAGATTGTAGACCGAGCCTCAAACACAATCCAGGCTGCCATGGCTAGGCTTGAGGAAGAATTCCGCCATATCTTGATTCGAAGCACAGTCCCCCTAGATGCTGATCGCCTCCATGTTTCGATCCGCCGGGTCTCACTGTCTTTTGCATCCAACTATGGAGAAATTGACGATGAATTTGAGAGCTTTGAGGAGGTTGATCGTGAATCTGGACGATATCATGAGAGAGGTGCGAGTTTGGGCGATGACATGTGGATTGATTTGATACATCCCGATGCGGTTGTGGAGTTGAAAGAGATTGCGAACCGCATGGTTCGTGCTGGTTATGAAAGAGAGTTTGTTCAGGTCTATAGTACCGTCCGCCGGGAAGTTTTGGATGAATATCTTGGGATTCTTGGAATTGAGAAGCTGAGCATTGAGGAGGTCCAGAAAATGGAGTGGAAAATTTTGGACGAGAAAATGAAGAAATGGAGTCAAGCTGTTAAAATAGTGGTTCGAGTGCTTTTCATGAGTGAAAAGCGACTTTGTGATCATTTTTTTGATGGGTCTGATGTGTCTAAGGAAGTTTGCTTCAATGAGACTGCAAAAGGGTGTGTGATGCAGTTGTTGAATTTTGGGGAGGCCGTGGCCATCGGGGAAAGGTCCCCAGAGAAGTTATTTAGAATTTTGAATATGTATGATTCTTTGGCTAATGTTTTACCAGATTTACAAGCAATGGTTACTGATGAGTTTGTCATCGGTGAGGCACGTGAAGTGCTATCTGGCCTGGCAGAGGCATCCCAAGGGACCTTTTCAGTGTTCGAGAATGCTGTTCAGAGTGAGACATCAAAGAAGCCCATGATAAATGCTGAGATTCATCCTCTTACTCGTTATGTGATGAATTATGTAAAATTGCTTGTGGATTACCGTCCTATATTAGATTCACTCTTGGAAAATGGGGAAGAAGAATTGAATTGCGTGAAGAATGAGCATGGGGATAATTTGGAGTTAGAATGCACGTCACCTTTAGCCCGTCGCCTGTTTTTGTTGATGTCATGTCTGGAGGCCAATCTTGAAGAGAAATCAAAACTTTATGTAGATGGGGCGATACAGTACGTATTTCTTATGAACAATATTTTATACATAGTTCAAAAGGTGAAAGATTCTGAGCTTCGCAAACTATTGGGTGATAACTGGGTTCGCAAACGGCGTGGGAAGATTCGCCAGCTTGCAACTAGTTATATTCGAGCTTCTTGGACCAAGGTATTGTCTTATTTTAACGATGGGGCTGGTGCTGGTGGGAGTTCAAGTAATGCCTTGAAGGCGGCTTTGAAGGAAAGACTCAAAAATTTCAATGCTGGATTTGAGGAAATCTATAGAACCCAGTCGGGTTGGAAAGTACCTGATTCTCAACTTCGCGAAGATCTACGAATCTCTGTATCTGAAAAGGTCATTCCGGCTTACCGCTCCTTCATGGGGAAGTTTGAAAAGCAGCTAGAGAGTGGAAGACATGCTGAGAAGTATGTTAAATACACAGCAGATGATATAGGAAACTATCTGTTGGATTTGTTTGAAGGAACACCTCGCGTTCTACACCACCTACGAAGAAAAAGTACATAA 1956 43.92 MTTTTTNVGGGDEDRVMAAAQQILKSLNAPKEVREDMLLIFSNFDNRLSNITQLINSEDVKNEDRYEAAEKVILRWESNSDALRNSLHWEESPDEAAEYLSAVDEVLQLIEDLSLRSESSEIVDRASNTIQAAMARLEEEFRHILIRSTVPLDADRLHVSIRRVSLSFASNYGEIDDEFESFEEVDRESGRYHERGASLGDDMWIDLIHPDAVVELKEIANRMVRAGYEREFVQVYSTVRREVLDEYLGILGIEKLSIEEVQKMEWKILDEKMKKWSQAVKIVVRVLFMSEKRLCDHFFDGSDVSKEVCFNETAKGCVMQLLNFGEAVAIGERSPEKLFRILNMYDSLANVLPDLQAMVTDEFVIGEAREVLSGLAEASQGTFSVFENAVQSETSKKPMINAEIHPLTRYVMNYVKLLVDYRPILDSLLENGEEELNCVKNEHGDNLELECTSPLARRLFLLMSCLEANLEEKSKLYVDGAIQYVFLMNNILYIVQKVKDSELRKLLGDNWVRKRRGKIRQLATSYIRASWTKVLSYFNDGAGAGGSSSNALKAALKERLKNFNAGFEEIYRTQSGWKVPDSQLREDLRISVSEKVIPAYRSFMGKFEKQLESGRHAEKYVKYTADDIGNYLLDLFEGTPRVLHHLRRKST 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20558300 20560255 + BLOR14083 Blo04g01171 60199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01171 651 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 47 650 - -
Blo04g01171 651 Gene3D Exocyst complex component Exo70 80 643 - -
Blo04g01171 651 Pfam Exo70 exocyst complex subunit 274 633 IPR046364 GO:0000145|GO:0005546|GO:0006887
Blo04g01171 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 650 IPR004140 GO:0000145|GO:0006887
Blo04g01171 651 SUPERFAMILY Cullin repeat-like 78 637 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01171 Blo-Chr4:20558300 Blo15g00211 Blo-Chr15:2154095 0 dispersed
Blo13g01090 Blo-Chr13:33019829 Blo04g01171 Blo-Chr4:20558300 1.41E-101 dispersed
Blo14g00063 Blo-Chr14:486656 Blo04g01171 Blo-Chr4:20558300 1.13E-126 transposed
Blo17g00391 Blo-Chr17:4296283 Blo04g01171 Blo-Chr4:20558300 2.01E-139 transposed
Blo16g00265 Blo-Chr16:6254324 Blo04g01171 Blo-Chr4:20558300 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01171 K07195 - mnt:21411514 925.235