Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01221 ATGAGGAAGAGGGAGAGAGAGAATCCTTGCGGGGTTTGTGGCCATTATCACAAATACGAGGAAGGGGAAGTCTGCGGGATTTGTGGCCACCGCGTTCCGGTATCGTCGGAGAAAACGTCGATGCAAGTAAGTGCCTTTCCGTCGGAGATCTTGGCGGAATTTCTTTATTTGGGTAGCTACGACAACGCTTCCAGGCCCGAACTTCTCAAAACTCAGGGAATCTCCCGCGTTCTGAATAGTGTACCTGCTTGTCAAAATCTCTACAAGAATTCATTCACTTATCACTGCCTTGAATACGATAAATCTCTACCATTCGACGATGCAATACAATTTCTAGAGCAATGTGAAAGGGACAAAGCACGGGTTCTGGTGCACTGCATGTCAGGGAAAAATAGGTCCCCGGCCATTGTAATAGCTTACTTGATGAAGAGCAAAGGGTGGAGATTACAACAGAGCTATCAGTGGGTGAAAGAGCGGAGACCGTCTGTTGATATCACTGAAGCTGTCCATCAACAATTGCAGGAGTTCGAGAAGAAAGCATTTGAGTCTTCTGATACGAACAAATCTAGCTTGCCCATATTCCCACCTGCAGTCTCCAGCACAGCTTTTAGTTTCGGTTTCCCAAAAATCAAAGATCCGATTCCTGTTCCTGCTTTCAATACTGCCGGTGGGACGTCCATTTTTTCCAGTTCGACTTCAGACATCCCTCGCGAATTTGCGTTTGGAGCCAGCCAACAAAACGCCAGTGGAAGTGATGTGCCCATGGATAGCTCTTAA 777 46.98 MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPVSSEKTSMQVSAFPSEILAEFLYLGSYDNASRPELLKTQGISRVLNSVPACQNLYKNSFTYHCLEYDKSLPFDDAIQFLEQCERDKARVLVHCMSGKNRSPAIVIAYLMKSKGWRLQQSYQWVKERRPSVDITEAVHQQLQEFEKKAFESSDTNKSSLPIFPPAVSSTAFSFGFPKIKDPIPVPAFNTAGGTSIFSSSTSDIPREFAFGASQQNASGSDVPMDSS 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23317196 23319415 + BLOR14133 Blo04g01221 60249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01221 258 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
Blo04g01221 258 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
Blo04g01221 258 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 258 - -
Blo04g01221 258 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 258 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Blo04g01221 258 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Blo04g01221 258 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Blo04g01221 258 CDD DSP_plant_IBR5-like 47 176 - -
Blo04g01221 258 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 185 IPR029021 -
Blo04g01221 258 Gene3D Protein tyrosine phosphatase superfamily 40 190 IPR029021 -
Blo04g01221 258 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01221 Blo-Chr4:23317196 Blo06g01155 Blo-Chr6:34957592 9.74E-09 dispersed
Blo04g01221 Blo-Chr4:23317196 Blo13g00894 Blo-Chr13:31492229 5.28E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01221 K04459 - zju:107417407 424.476