Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01249 ATGACATCTGGGAATTCTTTGAATTCAGAATTATCAAAGAAGACTTCATTGGGTTTGTCACTATGGGTTTTGATCTGTTTATGTGTTGGTGCATTTATAGTCTTAGTTCTTTGCTTCCTGTCCATATGGGTAATGTTCAGAAGAAAATCTAGAAGAACTGTTGACAAATTTTCTATTTCTCAAATTCCAAATGTATCAAAGGATATCAAGGTCGACAGGGTCGGTACTCAGACTGGGCATGGTAACCCTGAAAGCTTATTCCTTTCTGTCCATGAAAAATTAGGTGATAAATGCTCGGAGATAACGTTAGCTCAATTGGGCATGAGCAAATCAAGGGACAAAGATAATATCAGCGAGGGCAGCTCGATTCAACATTGCGAAAGGGGATGCAGTTCACAGTCTGGGGATGAAGGAAACTCTGGAACTGTTGGGAAACAGCCCTCACAATCATATGGAGAATATGGATTTGTGCCACCCTCTCCTCTAGTTGGGTTGCCGGAAGTTTCACATCTTGGGTGGGGCCATTGGTTCACTCTTAGGGATCTGGAATTTGCTACTAATCATTTTTCTGCAGAGAATGTGGTCGGTGAGGGTGGTTATGGAGTTGTGTACAGAGGCAGACTGGTTAATGGAACTGAGGTGGCAGTGAAAAAACTTCTTAATAACTGGGGACAGGCAGAGAAAGAATTTAGGGTGGAAGTGGAGGCCATTGGCCATGTTCGCCACAAAAATCTTGTGCGGCTATTAGGTTATTGCATAGAAGGAGTTCATCGGATGCTAGTATATGAATATGTGAACAATGGAAACTTAGAACAATGGCTGCATGGGGCAATGCGGCTCCATGGCTCCCTTACTTGGGAGGCACGCATGAAGGTGGTTCTTGGTACAGCTAAGGCGCTTGCTTATTTGCATGAAGCGATAGAACCTAAAGTAGTTCACAGAGACATAAAATCAAGCAATATCTTGATCGATGACAAGTTCAATGGCAAAGTTTCTGATTTTGGATTGGCCAAGCTTTTAGGCTCAGGAGAGAGTCACATCACAACTCGGGTGATGGGAACATTTGGTTACGTGGCACCAGAATATGCTAACACTGGATTGTTAAACGAGAAAAGTGACGTCTATAGTTTTGGTGTTCTCCTTCTTGAGACAGTGACAGGAAGGGACCCTGTGGATTATGGCCGTGCTGCGAATGAGGTTAATCTTGTAGAGTGGCTTAAGGTGATGGTGGGAACTAGAAGGGCGGAGGAAGTAGTAGATCAAAATCTCAAAGTTAAGCCCACGATAAGAGCTTTAAAACGAGCCCTGCTTGCTGCACTTAGATGTGTCGGTCCCGAGTCAGACAAGAGACCGAAAATGAGTCAAGTTGTAAGGATGCTAGAAGCCGATGAATACCCGCTCCCAGAGGATCGAAGGAACCGTAAAAGTCGAACTGCAAGCATGGAAATAGAGCTGAGGAAGGAAGTTTCTTCTTGTTCAGGAGAATCCGAAAAGAGGGCCGAAGAGCCTGAGATCGAAACTTCACTGACAACTCGAGGATAG 1542 44.23 MTSGNSLNSELSKKTSLGLSLWVLICLCVGAFIVLVLCFLSIWVMFRRKSRRTVDKFSISQIPNVSKDIKVDRVGTQTGHGNPESLFLSVHEKLGDKCSEITLAQLGMSKSRDKDNISEGSSIQHCERGCSSQSGDEGNSGTVGKQPSQSYGEYGFVPPSPLVGLPEVSHLGWGHWFTLRDLEFATNHFSAENVVGEGGYGVVYRGRLVNGTEVAVKKLLNNWGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRLHGSLTWEARMKVVLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDKFNGKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLETVTGRDPVDYGRAANEVNLVEWLKVMVGTRRAEEVVDQNLKVKPTIRALKRALLAALRCVGPESDKRPKMSQVVRMLEADEYPLPEDRRNRKSRTASMEIELRKEVSSCSGESEKRAEEPEIETSLTTRG 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24551720 24554336 + BLOR14161 Blo04g01249 60277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01249 513 CDD STKc_IRAK 205 461 - -
Blo04g01249 513 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Blo04g01249 513 Pfam Protein kinase domain 191 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01249 513 PANTHER OS01G0323000 PROTEIN 3 504 - -
Blo04g01249 513 MobiDBLite consensus disorder prediction 122 149 - -
Blo04g01249 513 Gene3D Transferase(Phosphotransferase) domain 1 265 476 - -
Blo04g01249 513 ProSiteProfiles Protein kinase domain profile. 189 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01249 513 SUPERFAMILY Protein kinase-like (PK-like) 173 465 IPR011009 -
Blo04g01249 513 PANTHER OS10G0497600 PROTEIN 3 504 - -
Blo04g01249 513 SMART serkin_6 189 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01249 513 Gene3D Phosphorylase Kinase; domain 1 170 264 - -
Blo04g01249 513 MobiDBLite consensus disorder prediction 465 513 - -
Blo04g01249 513 MobiDBLite consensus disorder prediction 110 150 - -
Blo04g01249 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01249 Blo-Chr4:24551720 Blo17g00692 Blo-Chr17:18529350 0 dispersed
Blo13g00317 Blo-Chr13:17672188 Blo04g01249 Blo-Chr4:24551720 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84274 PF00069 Pkinase 3.50E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01249 - - zju:107416135 800.045