Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01257 ATGTCGAATCAACAGAATGATTCCTTCCGGCAGTTTGATCCTTTCCATTACAACTTCAACGACGCTAATCGGCCATGCCTTCCCTTCTTCGATGAAGATTCTCCATCACTGTTTTGCAATCAACAAGCCACCTCGCAAAACCCTCAAAAAGAGCTATATCCCTCCTCATACATGACCTTCACTGAAACTTTGCATACTTCTATGGATTATGACACTCTTTCGAGAGCCTTTGATTTGCCTTGTTCCTCGTCGGAAGTCATTTCTCCCATCGAAAATGACTGGACAAAAGCCAGCGTTGTCGGAGAGTCGGGAGGGAAGGGTGAAACCCCATCGTCACCGAATTCCTCAGTTTCTTCTTCGTCTAACGAGGGAATTGCAGAAGCAGATTCGTCTAAAAAGGACGAGGATCAAGCAAAAGCTAGCGAAGATGGAGATGAAGACAATTCTAAAAAATCGAACAAATCTAAGAAGAAAGAAAAACCCAAAAAAGAGCCGAGGTTTGCCTTTCTCACCAAGAGCGAGATCGATCACCTTGAAGATGGTTACAGATGGAGGAAGTACGGACAGAAGGCAGTGAAAAATAGCCCCTATCCAAGAAGCTATTACAGATGCACTGCTCAGAAATGCGGAGTGAAGAAGAGAGTGGAGAGGTCATTTCAAGATCCTTCCGTAGTGATAACAACCTATGAAGGGCAACATATTCACCAGTGTCCGGCGACGCTCCGGGGAAATTCGCCGGGAATGTTGTCACCTTCTCTCTTTGCAGCTGCATCAGCTTCCGTGCCGCCTTTTCTCCCTCCGGAACTGCTGTCTCAGTTTTTCCCATCCAATATTAACCAAGTTGATGCAGGTGGTTCCATGCTCTATCAGAACCTCAATCTTCATCCCCACCATCTTCAGTTTCCTGACTATGGCTTACTGCAAGATTTAATTACATCTTCATTCCCTCATAAGCAAGACCCATGA 966 45.45 MSNQQNDSFRQFDPFHYNFNDANRPCLPFFDEDSPSLFCNQQATSQNPQKELYPSSYMTFTETLHTSMDYDTLSRAFDLPCSSSEVISPIENDWTKASVVGESGGKGETPSSPNSSVSSSSNEGIAEADSSKKDEDQAKASEDGDEDNSKKSNKSKKKEKPKKEPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTAQKCGVKKRVERSFQDPSVVITTYEGQHIHQCPATLRGNSPGMLSPSLFAAASASVPPFLPPELLSQFFPSNINQVDAGGSMLYQNLNLHPHHLQFPDYGLLQDLITSSFPHKQDP 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25021327 25022732 + BLOR14169 Blo04g01257 60285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01257 321 SMART WRKY_cls 178 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo04g01257 321 SUPERFAMILY WRKY DNA-binding domain 171 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo04g01257 321 Pfam WRKY DNA -binding domain 179 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo04g01257 321 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 15 314 - -
Blo04g01257 321 ProSiteProfiles WRKY domain profile. 173 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo04g01257 321 MobiDBLite consensus disorder prediction 99 169 - -
Blo04g01257 321 MobiDBLite consensus disorder prediction 127 154 - -
Blo04g01257 321 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 314 IPR044810 GO:0003700
Blo04g01257 321 MobiDBLite consensus disorder prediction 105 126 - -
Blo04g01257 321 Gene3D WRKY domain 165 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g01257 Blo13g00315 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01257 Blo-Chr4:25021327 Blo13g00315 Blo-Chr13:17440261 6.76E-165 dispersed
Blo04g01257 Blo-Chr4:25021327 Blo07g00133 Blo-Chr7:1815711 1.60E-45 transposed
Blo04g01257 Blo-Chr4:25021327 Blo02g00473 Blo-Chr2:6768754 1.02E-45 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12358 PF03106 WRKY 7.10E-25 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01257 - - zju:107416121 335.495