Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g01262 | ATGAGCAACGGACGACGGCGAGGCTCGAGTACTCGTTGTCCGGCGTCGAGCAGCGATGGTGTGGCTGCGGGCTACGTGATGAATGACGGATTTGCCGCGGAATTGGCGAGCTTGATGGCAGTGGATTGCGATGGAGGAGGGCTTTGGTTCGCTAGTGTGTTGGTTCTCGATGGGCTTGGTCCTCGGTTCGGTCTAAGCTGGTCAATTGCTGGCCTTCATCTGGCAAGCTTTCCACATGAGGATTTATACTGCTGCTCTCGGGTGTGTTTTGGTGAAGGTGCTCTGGAGATTGAGCCAAGGAATTGGATGGAAGCTGTGAAGACAGTGAAGGAGCAAGAGGCTTCCTCTTGGGAGAACTCTGGCCGTGAGCTAATGGCTGAGAAGGTGAAGTTTACAGCTGAGGAGCTTCGCAAAATTATGGATTTGAAGCACAATATTCGGAATATGTCTGTTATTGCGCATGTCGATCATGGAAAGTCAACCCTTACCGATTCACTTGTGGCTGCTGCTGGTATTATTGCTCAGGAGGTTGCAGGTGATGTTAGGATGACAGATACACGAGCAGATGAAGCAGAACGTGGTATCACTATTAAGTCCACTGGAATTTCATTATATTATGAAATGTCTGATGAATCCTTGAAGAGCTACAAGGGAGAGCGAGTTGGAAATGAGTATCTTATAAATCTTATTGATTCTCCTGGACACGTTGACTTCTCCTCTGAGGTCACTGCTGCTCTGCGTATCACCGATGGAGCACTGGTGGTGGTAGATTGCATTGAAGGTGTTTGTGTTCAAACAGAGACTGTACTCCGTCAGGCTCTTGGAGAGAGAATTAGGCCTGTTTTGACAGTTAACAAGATGGACAGGTGCTTCCTTGAACTTCAGGTTGATGGAGAAGAAGCTTATCAAACATTCCAAAGGGTCATTGAAAATGCCAATGTGATCATGGCCACATATGAGGATCCTCTTCTTGGTGACGTTCAGGTCTACCCTGAGAAAGGAACAGTGGCATTCTCTGCTGGTTTACATGGTTGGGCTTTCACACTGACCAACTTTGCAAAGATGTATGCTTCCAAATTTGGTGTTGATGAGTCAAAGATGATGGAGAGGCTTTGGGGTGAAAACTTCTTTGATCCTGCCACTAGAAAATGGACCACCAAAAATACAGGTACTGCATCGTGCAAGCGTGGATTTGTTCAGTTCTGTTATGAGCCCATCAAGCAAATTATTGCAACGTGCATGAATGACCAGAAGGATAAGCTTTGGCCTATGCTGCAAAAGTTGGGGGTGACTATGAAGTCAGATGAGAAGGAGTTGATGGGTAAGGCGCTGATGAAGCGCGTAATGCAGACTTGGCTTCCAGCTAGCACAGCTCTTTTGGAAATGATGATCTTTCATCTTCCCTCTCCTTCCAAGGCTCAAAAGTATCGTGTTGAAAATTTATACGAAGGCCCCCTTGATGACCAATATGCTACTGCAATTAGAAACTGTGACCCTGATGGACCACTTATGCTCTATGTGTCTAAGATGATCCCTGCATCTGATAAAGGTCGATTCTTTGCTTTTGGTCGTGTTTTCTCTGGAAGAGTTGCTACTGGTATGAAAGTGAGGATCATGGGGCCAAACTATGTCCCGGGTGAGAAAAAGGACTTATATGTTAAAAGTGTCCAAAGAACTGTCATTTGGATGGGAAAGAAGCAAGAAACTGTTGAGGATGTTCCTTGTGGAAACACTGTTGCCATGGTTGGGCTTGATCAGTTCATCACCAAGAATGCTACGTTGACCAATGAGAAGGAAGTGGATGCACACCCAATCCGAGCAATGAAATTTTCAGTTTCACCTGTTGTTCGGGTGGCAGTTCAGTGCAAGGTGGCATCTGACCTTCCCAAACTCGTTGAAGGTCTAAAACGTTTAGCAAAATCAGATCCTATGGTTGTTTGTTCAATGGAAGAGTCTGGAGAGCACATTATTGCTGGTGCTGGAGAATTGCACCTCGAAATCTGTTTGAAGGATTTGCAGGACGACTTCATGGGTGGTGCAGAAATTGTGAAATCTGATCCTGTGGTTTCATTCCGTGAGACTGTTCTTGAGAAGTCTTGTCGAACAGTCATGAGTAAATCACCCAATAAACATAACCGACTGTACATGGAAGCCCGTCCAATGGAAGATGGACTTGCTGAGGCAATTGATGACGGTCGCATCGGCCCAAGAGATGACCCAAAAGTGCGTTCAAAAATTTTGGCAGAGGAGTTTGGTTGGGACAAGGATCTTGCCAAAAAGATATGGTGTTTTGGCCCGGAAACAACTGGGCCCAATATGGTTGTGGATATGTGCAAGGGAGTTCAGTATCTCAATGAAATCAAGGACTCCGTCGTTGCTGGATTCCAGTGGGCATCAAAAGAAGGTGCCTTGTGTGAAGAAAACATGAGGGGCATATGTTTTGAAGTTTGTGATGTGGTTCTTCACGCAGATGCGATCCACAGAGGAGGTGGTCAGGTTATTCCTACTGCTAGGAGGGTCATCTACGCATCCCAACTGACAGCCAAGCCCCGACTTCTGGAGCCTGTCTATTTGGTGGAGATCCAAGCACCTGAGCAGGCACTTGGAGGTATTTATAGCGTTCTTAACCAGAAACGTGGGCATGTGTTTGAGGAAATGCAGCGGCCTGGGACCCCTCTTTACAACATCAAGGCCTACCTCCCAGTGGTTGAGTCCTTTGGTTTCTCTGGCACTTTGCGGGCAGCAACCTCAGGCCAGGCTTTTCCACAGTGCGTGTTTGATCACTGGGATATGATGTCGTCTGACCCACTTGAAGATGGATCCCAGGCTGCAGTAAAAGTTGCTGACATTCGAAAGAGGAAGGGCTTGAAGGAGCAGATGACACCACTCTCCGATTTCGAGGACAAGCTATAA | 2913 | 46.82 | MSNGRRRGSSTRCPASSSDGVAAGYVMNDGFAAELASLMAVDCDGGGLWFASVLVLDGLGPRFGLSWSIAGLHLASFPHEDLYCCSRVCFGEGALEIEPRNWMEAVKTVKEQEASSWENSGRELMAEKVKFTAEELRKIMDLKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMSDESLKSYKGERVGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATRKWTTKNTGTASCKRGFVQFCYEPIKQIIATCMNDQKDKLWPMLQKLGVTMKSDEKELMGKALMKRVMQTWLPASTALLEMMIFHLPSPSKAQKYRVENLYEGPLDDQYATAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFSGRVATGMKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCSMEESGEHIIAGAGELHLEICLKDLQDDFMGGAEIVKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDDGRIGPRDDPKVRSKILAEEFGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALCEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEDGSQAAVKVADIRKRKGLKEQMTPLSDFEDKL | 970 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 25545836 | 25553662 | - | BLOR14174 | Blo04g01262 | 60290 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g01262 | 970 | Gene3D | - | 850 | 970 | - | - | |
Blo04g01262 | 970 | Pfam | Elongation Factor G, domain III | 614 | 676 | IPR041095 | - | |
Blo04g01262 | 970 | PRINTS | GTP-binding elongation factor signature | 148 | 161 | IPR000795 | GO:0003924|GO:0005525 | |
Blo04g01262 | 970 | PRINTS | GTP-binding elongation factor signature | 280 | 289 | IPR000795 | GO:0003924|GO:0005525 | |
Blo04g01262 | 970 | PRINTS | GTP-binding elongation factor signature | 228 | 238 | IPR000795 | GO:0003924|GO:0005525 | |
Blo04g01262 | 970 | PRINTS | GTP-binding elongation factor signature | 192 | 200 | IPR000795 | GO:0003924|GO:0005525 | |
Blo04g01262 | 970 | PRINTS | GTP-binding elongation factor signature | 244 | 255 | IPR000795 | GO:0003924|GO:0005525 | |
Blo04g01262 | 970 | PANTHER | - | 129 | 969 | - | - | |
Blo04g01262 | 970 | SUPERFAMILY | Translation proteins | 470 | 603 | IPR009000 | - | |
Blo04g01262 | 970 | SMART | EFG_IV_2 | 733 | 849 | IPR005517 | GO:0005525 | |
Blo04g01262 | 970 | SUPERFAMILY | EF-G C-terminal domain-like | 854 | 964 | IPR035647 | - | |
Blo04g01262 | 970 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 185 | 200 | IPR031157 | - | |
Blo04g01262 | 970 | CDD | eEF2_snRNP_like_C | 854 | 932 | - | - | |
Blo04g01262 | 970 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 129 | 969 | - | - | |
Blo04g01262 | 970 | TIGRFAM | small_GTP: small GTP-binding protein domain | 147 | 303 | IPR005225 | GO:0005525 | |
Blo04g01262 | 970 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 613 | 690 | - | - | |
Blo04g01262 | 970 | Pfam | Elongation factor Tu GTP binding domain | 144 | 469 | IPR000795 | GO:0003924|GO:0005525 | |
Blo04g01262 | 970 | Gene3D | - | 696 | 849 | IPR014721 | - | |
Blo04g01262 | 970 | Gene3D | - | 130 | 364 | IPR027417 | - | |
Blo04g01262 | 970 | SUPERFAMILY | EF-G C-terminal domain-like | 611 | 687 | IPR035647 | - | |
Blo04g01262 | 970 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 131 | 468 | IPR027417 | - | |
Blo04g01262 | 970 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 689 | 853 | IPR020568 | - | |
Blo04g01262 | 970 | CDD | EF2_II | 502 | 597 | - | - | |
Blo04g01262 | 970 | CDD | aeEF2_snRNP_like_IV | 686 | 858 | - | - | |
Blo04g01262 | 970 | Gene3D | Translation factors | 470 | 611 | - | - | |
Blo04g01262 | 970 | Pfam | Elongation factor Tu domain 2 | 521 | 594 | IPR004161 | GO:0005525 | |
Blo04g01262 | 970 | SMART | EFG_C_a | 851 | 940 | IPR000640 | - | |
Blo04g01262 | 970 | CDD | EF2_snRNP_III | 614 | 686 | - | - | |
Blo04g01262 | 970 | Pfam | Elongation factor G, domain IV | 738 | 849 | IPR005517 | GO:0005525 | |
Blo04g01262 | 970 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 144 | 471 | IPR000795 | GO:0003924|GO:0005525 | |
Blo04g01262 | 970 | Pfam | Elongation factor G C-terminus | 851 | 938 | IPR000640 | - | |
Blo04g01262 | 970 | CDD | EF2 | 147 | 357 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g01262 | Blo-Chr4:25545836 | Blo05g00516 | Blo-Chr5:9268709 | 1.77E-19 | dispersed | |
Blo02g01057 | Blo-Chr2:40792272 | Blo04g01262 | Blo-Chr4:25545836 | 9.05E-43 | transposed | |
Blo11g00689 | Blo-Chr11:7986130 | Blo04g01262 | Blo-Chr4:25545836 | 1.56E-22 | transposed | |
Blo03g00921 | Blo-Chr3:35220131 | Blo04g01262 | Blo-Chr4:25545836 | 2.71E-136 | transposed | |
Blo07g01250 | Blo-Chr7:32648122 | Blo04g01262 | Blo-Chr4:25545836 | 4.34E-22 | transposed | |
Blo13g00321 | Blo-Chr13:18130516 | Blo04g01262 | Blo-Chr4:25545836 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g01262 | K03234 | - | csv:101209544 | 1638.24 |