Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01266 ATGGATACACACTCCCTACTATACAGCGCTTTTATCGGATTTCAAACCCATCATCTTCCCTCCCCTCGCTCTCCTCCGTTACATTCTCTGTGCCACCTCATTGGTTTCCCTTCAGATGCTTCTATTTATTCATCCAACCCAACCTCCGTAGCTCCCCCATCTGATCTCCCTGTCCCTCAATCGCGCCTCGCAGACATGGCTTCCTCTGCTAGATTTTTCTTCCGCTCCTCCCCTGCTGCTTTCGTCGCCGTTATGCTGTTTTTCTCTGGCTTTTCGTCCACTTTTGGTTCCTCTGATTTCTCCATTATTGACTACGACTCGAAGCACCACATGGGCGATCCTGATCGAACCGATAATGAGGTTCGGGAAATTTATGAGTCGTGGGTAGTCAAGCATGGCAAAGCCTACAACGCTCTTGGCGAGAAGGAGAAGAGATTTCAGATCTTCAAGGATAATCTGAGGTTCATTGACGAGCACAACCAGGCGAACCGGACTTACAAGGTCGGTCCGAATCGATTTGCTGACCTCACGAACGAGGAGTACCGGGCCACGTTTTTGGGATCCAAAATCGGGCGGAAGGCTCGGCTCGCCGAGACGAAGAGCAACAGTTGCTGGGCGTTCTCGACGATAGCTGCTGTGGAAGGAATAAATAAAATTGTTACAGGCGAGCATATCTCCTTGTCAGAGCAAGAACTAGTGGACTGTGACAGATCATACAACCAGGGATGCAATGGAGGTCTGATGGATTACGCATTCGAATTCATCATGAACAATGGCGGCATTGATTCCGAAGAGGACTACCCTTACAGTGCTCGTGATGGCGCAGGCTGTGATCCCATCCGGAAAAACGCCAAGTTTGTGACGATCGACGGATACGAAGATGTTCCAGAGAACGACGAGAACTCATTGAAGAAGGCAGTGTCAAACCAGCCTGTCAGCGTGGCCATTGAAGCCGGCGGCAGAGCTTTCCAACTTTACCAATCGGGCGTCTTTACCGGGCTATGCGGCACGGATTTGGATCACGGCGTTGTCGCAGTGGGATACGGCACAGAAAACGGAGTCAATTACTGGACGGTGAGAAACTCGTGGGGACCCAATTGGGGGGAAAGCGGATATATCAGATTGGAGCGTAACTTGGCCGACACGACGACGGGGAAATGTGGAATTGCGATAGAGCCTTCGTATCCCATCAAGAAGGGACTAAACCCACCCAAGCCAAGCCCATCGCCACCATCGCCTGTGAAGCCCTCCACTGTGTGCGACGAATACAACTCATGCCCTGAGAAAACCACTTGCTGCTGTATCTATCAGTACGGAACTTACTGCTTTGGCTGGGGATGTTGCCCTCTCGAGTCTGCCACTTGCTGCGACGACAATTACAGTTGCTGCCCCCAAGACTATCCGATTTGCGATCTGGAGGCCGAAACTTGCCTGATGAGCAAGAAGAATCGGGTGGGCGTGAAGGCGCTAAAGCGTGTCCCGGCCAAGCGAACAAGTTATATAATGGACGCTAAACCAGAAGATACTTCAGGATCATCTCAGGCAAACACTTCTGCTGTTACACCCTCTGAAGTACAACATAATGTTGTAGTCACTGCTGAATCTGAGAATTTGAAACGCGATGTGCTATCTAGACTATCGTCTACTGGCATATCTTCTTGGGCAAAAAGTTTGAAGATTACACAGCCTTTGATTACATCACAAGATGTTTCATCAACTGCCAAGGCAGGAAAATCAAGTTTTTCACGTTTTTCCAGTGGCTTTGGATTGCAGTTGTCTCCAAAAGATCCTTCTCCAAATGATGTATCTGACAGCACTTTAAAAGCTCAGGAACCTGGTTTATTTGGAACACTTACAAAAGGTTTAGTTGATTCTTCTAGAAGTGCTGTGAAGGCTGTACAGGCCAAAGCTAGGCATGCTGTCTCTCAAAATAAACGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACATATATCACAGAAAACATAATTGCTATGGGATTCCCAGCTGGCGATATGAGTTCAGGGTTTTTGGGTTATGTTGAGGGTTTCTATCGGAACCACATGGAAGAAGTTATTAACTTCTTTGAAACTCATCATAAGGACAAGTACAAAGTGTACAATCTTTGTTCCGAGAGGCTGTACGATGCTTCATTGTTTGAAGGAAAGGTGGCTAGTTTTCCTTTTGATGACCATAATTGCCCTCCAGCTCGATTGATAATATCATTTTGTCAAAGTGCTTACATGTGGCTGAAGGAAGATATTGAAAATGTAGTGGTTGTGCATTGCAAAGCAGGAATGGCTAGAACAGGTTTGATGATATCTAGTCTTCTTCTATACCTGAAGTTTTTTCCAACTGCCGAGGAGTCCATTGACTACTACAACCAGAAAAGGTGTTTTGATGGCAAAGGCCTTATCCTACCAAGTCAGATTAGGTATGTCAAGTATTTTGAGCGCATATTAACATACTTCAATGGTGAAAATCCACCTGGCCGCAGGTGCATGCTTAGAGGATTTCGGCTTCATAGATGTCCGCATTGGACCAGGCCCTCTATAACTGTGTCTGATCATAATGGTGTTCTTTTCTCCTCCAAAAAACATCCAAGAACCAAAGATATCTCTCCAGAAGATTTTTGGTTCAGTGCACCAAAGAAGGGGGTGATGGTTTTTGCTTTACCTGGGGAGCCTGGTCTAACGGAGTTGGTGGGGGACTTTAAGATCCATTTCCATGACCGCCAAGGAGATTTTTACTGTTGGCTAAACACAACTATGATTGAAAACCGCAAAATTCTAGACACTAATGATCTTGATGGGTTTGACAAGAGAAAGCTGCCTTCCCCAGGATTTCAGGTTGAGGTTGTTTTAGTAGATTATGATGGTAGCATTCCTAGGTCACCTAATACCGCAAATAACACAAAGAACTCATTTGAAAGATCAAGTTCGACTCCTGCTCCAATCGATGGGGATTCAGCTCCTCCAAAACCTACAGAAAATCCCGTAAATGAAGATAAATACGATGCATCTTCAGACTTGGCGGCAGCAGCAGATGAGGGTGGTTCTTCAAAGGGCATTACTGAACCTGCCAGCGCCACCTCTACTTCTACGAGTAAGGCTGAAGATGAAGTTAGGAATTTAACACAGGCAACGGAAGAAGTTTCTTTACAAGACAGTATCCCAAAGCGAATCGCAACCTCTGGGGAGCCCAAAAATGATGCTGGGAGAAAAGTTTCCATCCAAGAGGCTTCAACCCCCGAAAGTGAGTTCAAGGCAATGGCAGCTGACGCTTCTGTCTTCACCTTTGGCGACGAAGAGGATTATGAGACTGATTGA 3333 46.41 MDTHSLLYSAFIGFQTHHLPSPRSPPLHSLCHLIGFPSDASIYSSNPTSVAPPSDLPVPQSRLADMASSARFFFRSSPAAFVAVMLFFSGFSSTFGSSDFSIIDYDSKHHMGDPDRTDNEVREIYESWVVKHGKAYNALGEKEKRFQIFKDNLRFIDEHNQANRTYKVGPNRFADLTNEEYRATFLGSKIGRKARLAETKSNSCWAFSTIAAVEGINKIVTGEHISLSEQELVDCDRSYNQGCNGGLMDYAFEFIMNNGGIDSEEDYPYSARDGAGCDPIRKNAKFVTIDGYEDVPENDENSLKKAVSNQPVSVAIEAGGRAFQLYQSGVFTGLCGTDLDHGVVAVGYGTENGVNYWTVRNSWGPNWGESGYIRLERNLADTTTGKCGIAIEPSYPIKKGLNPPKPSPSPPSPVKPSTVCDEYNSCPEKTTCCCIYQYGTYCFGWGCCPLESATCCDDNYSCCPQDYPICDLEAETCLMSKKNRVGVKALKRVPAKRTSYIMDAKPEDTSGSSQANTSAVTPSEVQHNVVVTAESENLKRDVLSRLSSTGISSWAKSLKITQPLITSQDVSSTAKAGKSSFSRFSSGFGLQLSPKDPSPNDVSDSTLKAQEPGLFGTLTKGLVDSSRSAVKAVQAKARHAVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFLGYVEGFYRNHMEEVINFFETHHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPARLIISFCQSAYMWLKEDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESIDYYNQKRCFDGKGLILPSQIRYVKYFERILTYFNGENPPGRRCMLRGFRLHRCPHWTRPSITVSDHNGVLFSSKKHPRTKDISPEDFWFSAPKKGVMVFALPGEPGLTELVGDFKIHFHDRQGDFYCWLNTTMIENRKILDTNDLDGFDKRKLPSPGFQVEVVLVDYDGSIPRSPNTANNTKNSFERSSSTPAPIDGDSAPPKPTENPVNEDKYDASSDLAAAADEGGSSKGITEPASATSTSTSKAEDEVRNLTQATEEVSLQDSIPKRIATSGEPKNDAGRKVSIQEASTPESEFKAMAADASVFTFGDEEDYETD 1110
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25890548 25900698 + BLOR14178 Blo04g01266 60294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01266 1110 SMART GRAN_2 420 477 IPR000118 -
Blo04g01266 1110 CDD Peptidase_C1A 203 396 IPR039417 -
Blo04g01266 1110 MobiDBLite consensus disorder prediction 961 1088 - -
Blo04g01266 1110 MobiDBLite consensus disorder prediction 964 987 - -
Blo04g01266 1110 Pfam Granulin 431 478 IPR000118 -
Blo04g01266 1110 SMART Inhibitor_I29_2 125 181 IPR013201 -
Blo04g01266 1110 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 760 799 IPR000387 GO:0016311|GO:0016791
Blo04g01266 1110 ProSiteProfiles C2 tensin-type domain profile. 832 959 IPR014020 -
Blo04g01266 1110 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 516 1110 - -
Blo04g01266 1110 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 902 956 IPR035892 -
Blo04g01266 1110 Gene3D - 834 959 - -
Blo04g01266 1110 ProSitePatterns Tyrosine specific protein phosphatases active site. 762 772 IPR016130 GO:0016311|GO:0016791
Blo04g01266 1110 SUPERFAMILY Cysteine proteinases 118 397 IPR038765 -
Blo04g01266 1110 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 659 826 IPR029021 -
Blo04g01266 1110 MobiDBLite consensus disorder prediction 504 523 - -
Blo04g01266 1110 Gene3D - 104 189 - -
Blo04g01266 1110 SMART PTEN_C2_2 830 958 IPR014020 -
Blo04g01266 1110 PRINTS Papain cysteine protease (C1) family signature 198 213 IPR000668 GO:0006508|GO:0008234
Blo04g01266 1110 PRINTS Papain cysteine protease (C1) family signature 341 351 IPR000668 GO:0006508|GO:0008234
Blo04g01266 1110 PRINTS Papain cysteine protease (C1) family signature 356 362 IPR000668 GO:0006508|GO:0008234
Blo04g01266 1110 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 516 1110 - -
Blo04g01266 1110 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 356 375 IPR025661 -
Blo04g01266 1110 MobiDBLite consensus disorder prediction 505 523 - -
Blo04g01266 1110 Pfam Papain family cysteine protease 202 397 IPR000668 GO:0006508|GO:0008234
Blo04g01266 1110 Gene3D Protein tyrosine phosphatase superfamily 631 828 IPR029021 -
Blo04g01266 1110 SUPERFAMILY Granulin repeat 418 451 - -
Blo04g01266 1110 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 339 349 IPR025660 -
Blo04g01266 1110 SMART pept_c1 177 397 IPR000668 GO:0006508|GO:0008234
Blo04g01266 1110 ProSiteProfiles Phosphatase tensin-type domain profile. 646 825 IPR029023 -
Blo04g01266 1110 CDD PTP_PTEN 656 821 IPR045101 GO:0016791
Blo04g01266 1110 Gene3D Cysteine proteinases 196 405 - -
Blo04g01266 1110 Gene3D Granulin 417 480 IPR037277 -
Blo04g01266 1110 MobiDBLite consensus disorder prediction 1025 1061 - -
Blo04g01266 1110 Pfam Cathepsin propeptide inhibitor domain (I29) 125 181 IPR013201 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01066 Blo-Chr4:15310825 Blo04g01266 Blo-Chr4:25890548 5.37E-133 dispersed
Blo04g01266 Blo-Chr4:25890548 Blo12g00966 Blo-Chr12:27768048 0 dispersed
Blo17g00378 Blo-Chr17:4194493 Blo04g01266 Blo-Chr4:25890548 9.86E-47 dispersed
Blo18g00796 Blo-Chr18:23336330 Blo04g01266 Blo-Chr4:25890548 4.83E-92 dispersed
Blo13g00325 Blo-Chr13:18585588 Blo04g01266 Blo-Chr4:25890548 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01266 K01110 - zju:107426986 865.144