Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01315 ATGGCCGCTCTTGGGAATAGAGACAAATCAACTCTACATGGTCACATAGGAGTGGTTCAAATGAATGCAAACGACACCAAGAAAGGCAATTCACAAGAGGCAGAGGAGGGGCTGACTGACTATATGAGACGGGCACAATGGCTTCGAGCAGCCGTATTGGGAGCCAACGATGGACTTCTCACGGTAGCATCGCTCATGGTGGGAGTGGGATCAGTGAAGAAAGATGCAAAAGCCATGCTTCTTGCAGGCCTTGCAGGCTTAGTGGGAGGAGCTTGTAGCATGGCAATGGGAGAGTTTGTCTCAGTTTACACACAATACGATGTCGAAATGTCTCAAATGAAAAGAGACAAGAAAAAGGGGAGCGGAATCAGTTTGAAAGAAGGAGAATGTGACGAGAAAGAGAAGCTTCCGAGCCCACTGCAGGCAGCTGTGGCCTTGGCCTTGGCATTTTCAGTCGGAGCATTGGTGGCATTGGTGGGGGCTGCGTTCATAACGGACCATAAGGTGGGGCTCGTTGTGACAGGGGCTGTGGCATGTGTGGCACTGTCCATGTTTGGAGGGGTGGGAGCCATGCTTGGAAAGACGGCAGTGGGAAGGTCTTGCTGTAGAGTGGTGGCTGGAGGGGTGATGGCCATGTCCATCACATTTGGACTCACCAAACTGGTTGCTTCCACTGGTCTTCAACTCTAA 690 51.45 MAALGNRDKSTLHGHIGVVQMNANDTKKGNSQEAEEGLTDYMRRAQWLRAAVLGANDGLLTVASLMVGVGSVKKDAKAMLLAGLAGLVGGACSMAMGEFVSVYTQYDVEMSQMKRDKKKGSGISLKEGECDEKEKLPSPLQAAVALALAFSVGALVALVGAAFITDHKVGLVVTGAVACVALSMFGGVGAMLGKTAVGRSCCRVVAGGVMAMSITFGLTKLVASTGLQL 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 28514934 28515623 - BLOR14227 Blo04g01315 60343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01315 229 Pfam VIT family 48 118 IPR008217 GO:0005384|GO:0030026
Blo04g01315 229 Pfam VIT family 130 219 IPR008217 GO:0005384|GO:0030026
Blo04g01315 229 Coils Coil 222 229 - -
Blo04g01315 229 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 13 224 IPR008217 GO:0005384|GO:0030026
Blo04g01315 229 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 13 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01315 Blo-Chr4:28514934 Blo18g00140 Blo-Chr18:1299326 1.20E-69 dispersed
Blo13g00254 Blo-Chr13:11497399 Blo04g01315 Blo-Chr4:28514934 1.97E-109 wgd
Blo13g00235 Blo-Chr13:10124136 Blo04g01315 Blo-Chr4:28514934 1.56E-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01315 K22736 - mnt:21403537 217.624