Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01335 ATGGCCAAAGGCCATCCTGTGCGTTTCGTGCTCGGGACGAGCAGTGGGCGAGAGAACAGGAGACAGGGGAGACATCCAGGCGAGATAGTAGGCGATGGGGACAGGAGTGGAGCGCTGGTGAGCGATGAGCGACGAGAGAGGAGGCTCTGGCGTGGGCAATTTTTGGCATCGAGCTTTGCAGGACTGACGTGGTGTGACTTTAGCATTGCGGGTGATGTTGGCCATTGTTTTCAGTGGCCATGGTCCAGCCTACTGGTTCTCCACACAGAACCGGCTTCCTCCTCTTCTGGTTCATGTCCCGTAGGAGGCCAACAGCTTGGAGCATGGGAGTGGTGTGAACGTCAAACCTCTGCCTCTCCCTACGTCTCTAGCTACTCCTCAGACCATTGCCCTACACTGAGCAAAAGAGTGACTTGTGAGAAGTTGGAATCTGGAGCTGCTGTTAGAACAGTGAGAAGAGAGCTGTACCTGAGTTTAGTGTCTTCAAATTGGTTTGAGAGAAAGTGGGGAGGGATGGAAAACATTGCTGCTCAATTGAAGAGAGGGATATCGAGACAGTTTTCCACGGGTTCGATTCGACGGAACCTGAGCCGGCAGTTCACGCGTCAGTCATCTCTGGACCCGCGACGGAACAACATGAGATTCAGCTTCGGAAGGCAGTCTTCGATGGACCCAATTCGGCGCAGCCCTAGCCATGATAATGACCTCACCGTCCCGGAGAACCTGGACGCCACAATGAACCTTCTCTTCATGGCGTGCCGGGGAGACGTCAAAGGTGTCGATGACTTGCTCGATGAAGGAGTTGACGTCAATAGCATCGACTTAGATGGACGAACTGCGCTGCATATCGCCGCATGCGAAGGCCATATCGAGGTTGTCAAACTTTTGCTCAGCCGCAGGGCTAATATCGACGCTCGTGATCGCTGGGGCAGTACGGCAGCTGCTGATGCCAAATACTATGGGCAGACAGAAGCTTTCAACATTTTGAAGGCAAGAGGAGCGAAAATTCCGAAAAACAGGAGGACGCCAATGACTGTTGCAAATCCCCGTGAAGTTCCAGAGTATGAGCTTAATCCACTTGAGCTTCAAATCCGTAGGAGTGATGGTATCTCAAAGGGAACATATCAAGTCGCCAAATGGAATGGGACAAAGGTTGCTGTAAAAATACTTGATAAAGAAAGCTACTCAAACCCTGATACTATAAATGCTTTCAGACACGAATTGACAATATTAGAAAAGGTCCGTCATCCAAATGTAGTTCAGTTTGTTGGAGCAGTTACCCAGAATGTTCCCATGATGATTGTTTCAGAGTATCATTCGAAGGGAGACTTGGCTAGTTATCTTCAAAAGAAAGGACGCCTTTCTCCATCTAAAGCTCTCAGATTTGCGCTTGATATTGCTAGGCATGTTTGTGCCAGAAATATTTTGCTCGATAATGGAGGTCAACTGAAGGTAGCTGGATTTGGTTTGATAAGATTGTCAAAAATTTCTCCTGACAAAGCAAAAGTAGCACTCCCTGAGGCTAATATTGACCTTTCAAGCTTATATTTGGCTCCTGAGGTTTACAAGAATGAAATATTTGACAGAAGTGTGGACTCATTTTCTTTTGGTCTTATTGTGTATGAGATGATTGAGGGTATACAGCCTTTCCATCCTAAACCTCCAGAAGAGGTCGCAAAAACAATATGTTTGGAAGGACAAAGACCTCAATTCAAGATCAAATTAAAAAGTTATCCTCCAGATTTAAGAGAGTTAATAGAGGAATGCTGGGATCCAGAACCTGTTGTACGGCCAACATTTTCTGAGATTATTGTTCGTTTGGATAAAATAGTATCCAACTGCTCAAAACAAGGATGGTGGAAAGACACTTTTAAGCTTCCGTGGTATGTGTTCTTTGAGTAG 1902 46.85 MAKGHPVRFVLGTSSGRENRRQGRHPGEIVGDGDRSGALVSDERRERRLWRGQFLASSFAGLTWCDFSIAGDVGHCFQWPWSSLLVLHTEPASSSSGSCPVGGQQLGAWEWCERQTSASPYVSSYSSDHCPTLSKRVTCEKLESGAAVRTVRRELYLSLVSSNWFERKWGGMENIAAQLKRGISRQFSTGSIRRNLSRQFTRQSSLDPRRNNMRFSFGRQSSMDPIRRSPSHDNDLTVPENLDATMNLLFMACRGDVKGVDDLLDEGVDVNSIDLDGRTALHIAACEGHIEVVKLLLSRRANIDARDRWGSTAAADAKYYGQTEAFNILKARGAKIPKNRRTPMTVANPREVPEYELNPLELQIRRSDGISKGTYQVAKWNGTKVAVKILDKESYSNPDTINAFRHELTILEKVRHPNVVQFVGAVTQNVPMMIVSEYHSKGDLASYLQKKGRLSPSKALRFALDIARHVCARNILLDNGGQLKVAGFGLIRLSKISPDKAKVALPEANIDLSSLYLAPEVYKNEIFDRSVDSFSFGLIVYEMIEGIQPFHPKPPEEVAKTICLEGQRPQFKIKLKSYPPDLRELIEECWDPEPVVRPTFSEIIVRLDKIVSNCSKQGWWKDTFKLPWYVFFE 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 29850882 29862389 + BLOR14247 Blo04g01335 60363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01335 633 ProSiteProfiles Ankyrin repeat profile. 276 308 IPR002110 GO:0005515
Blo04g01335 633 Gene3D - 209 355 IPR036770 -
Blo04g01335 633 SMART ANK_2a 309 338 IPR002110 GO:0005515
Blo04g01335 633 SMART ANK_2a 244 272 IPR002110 GO:0005515
Blo04g01335 633 SMART ANK_2a 276 305 IPR002110 GO:0005515
Blo04g01335 633 MobiDBLite consensus disorder prediction 208 225 - -
Blo04g01335 633 ProSiteProfiles Ankyrin repeat region circular profile. 276 308 - -
Blo04g01335 633 SUPERFAMILY Ankyrin repeat 235 347 IPR036770 -
Blo04g01335 633 MobiDBLite consensus disorder prediction 18 37 - -
Blo04g01335 633 MobiDBLite consensus disorder prediction 208 236 - -
Blo04g01335 633 Gene3D Phosphorylase Kinase; domain 1 358 440 - -
Blo04g01335 633 ProSiteProfiles Protein kinase domain profile. 360 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01335 633 Pfam Protein tyrosine and serine/threonine kinase 371 606 IPR001245 GO:0004672|GO:0006468
Blo04g01335 633 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 203 627 - -
Blo04g01335 633 SUPERFAMILY Protein kinase-like (PK-like) 378 616 IPR011009 -
Blo04g01335 633 MobiDBLite consensus disorder prediction 11 37 - -
Blo04g01335 633 Pfam Ankyrin repeats (3 copies) 250 336 IPR002110 GO:0005515
Blo04g01335 633 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 203 627 - -
Blo04g01335 633 Gene3D Transferase(Phosphotransferase) domain 1 441 624 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00902 Blo-Chr2:34888745 Blo04g01335 Blo-Chr4:29850882 1.86E-18 dispersed
Blo04g01335 Blo-Chr4:29850882 Blo13g00206 Blo-Chr13:8500333 0 dispersed
Blo04g01335 Blo-Chr4:29850882 Blo06g00917 Blo-Chr6:32426851 1.02E-69 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84275 PF07714 PK_Tyr_Ser-Thr 6.40E-41 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01335 - - csv:101213574 778.089