Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g01396 | TTGATTATTGATGCAGATGATGTAATAGTTACTGGGGTCTTAAGTGCAAAGTGGTCTCCAGACCTTAAAGATGTTCGGTGTGATCTTGACCCCATGTTAATTGCTAATTATGTGAGGAGAACTAATGAGTTGAAATCAGACATAGACATTCCTGAAGATGTTATAGCGAGATTCAAGCAGTTTTGGTCAAATTTCAATGATACTCCATTGAAAGGGAGGAATGCCATTTTAAGAGGTATATGCCCCCAAGTTTATGGACTCTTCACCGTAAAACTTGCAGTTATGTTGACACTTATTGGTGGGGTGCAACAAATTGATGCATCTGGGACTAAGGTTCGAGGGGAATCTCATTTGCTTTTGGTTGGGGATCCAGGTAGCACTAGTGCTGGATTGACTGTTGCTGCTGTTAAGGATGGGGGTGAATGGATGTTGGAAGCTGGGGCACTTGTTTTGGCAGATGGAGGACTTTGTTGCATCGATGAAGTGGACAGCATGAGAGAACATGACAGGGCTACCATACATGAAGCAATGGAGCAGCAGACCATAAGCGTCGCTAAGGCTGGTCTTGTAACAACTCTCAGAACTAGGACGATAGTATTTGGTGCAACAAACCCTAAAGGGCACTATGATCCTGATCAACACACTAAGAATGCTGAATGGGATGAAGTTGTTTCTTCGCACATTCTGTCCGAGGGTGAAGTAGAACAAGGGAAGTTTGAAGATCTATCAAAATCTTGGCCTTTACCTATGCTTCGCAGGTATATTCACTTTGTGAAAGGGCACTTCAGACCTGTGCTGACCAAGGAAGCAGAAAATATCATCTCTAACTATTATCAGCTCCAAAGAAGATCGGCAACACACAATGCAGCAAGGACAACTGTCCGGATGCTTGAAAGTTTGATCCGCCTAGCTCAAGCTCACGCCAGACTCATGTTTAGAAATGAAGTTACACGATTAGATGCCATTACGGCTATATTATGCGTTGAATCATCCATGACTACCTCAGCTATTGTGGACACTGTTGGGAATGCACTCCACTCCAATTTTACAGAGAATCCAGATGAAGAATGTATCCTTTTCAGGTTTTGCGCAAAAAATAGTAATAAATGCATGAAAAAGTTGAATTTA | 1128 | 42.29 | LIIDADDVIVTGVLSAKWSPDLKDVRCDLDPMLIANYVRRTNELKSDIDIPEDVIARFKQFWSNFNDTPLKGRNAILRGICPQVYGLFTVKLAVMLTLIGGVQQIDASGTKVRGESHLLLVGDPGSTSAGLTVAAVKDGGEWMLEAGALVLADGGLCCIDEVDSMREHDRATIHEAMEQQTISVAKAGLVTTLRTRTIVFGATNPKGHYDPDQHTKNAEWDEVVSSHILSEGEVEQGKFEDLSKSWPLPMLRRYIHFVKGHFRPVLTKEAENIISNYYQLQRRSATHNAARTTVRMLESLIRLAQAHARLMFRNEVTRLDAITAILCVESSMTTSAIVDTVGNALHSNFTENPDEECILFRFCAKNSNKCMKKLNL | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 33570200 | 33593652 | - | BLOR14308 | Blo04g01396 | 60424 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g01396 | 376 | Gene3D | - | 216 | 337 | IPR027417 | - | |
Blo04g01396 | 376 | ProSiteProfiles | MCM family domain profile. | 72 | 205 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo04g01396 | 376 | Pfam | MCM P-loop domain | 125 | 216 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo04g01396 | 376 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 82 | 338 | IPR027417 | - | |
Blo04g01396 | 376 | SMART | mcm | 1 | 333 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Blo04g01396 | 376 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 175 | 188 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo04g01396 | 376 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 113 | 128 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo04g01396 | 376 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 147 | 161 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo04g01396 | 376 | PRINTS | Mini-chromosome maintenance (MCM) protein family signature | 198 | 210 | IPR001208 | GO:0003677|GO:0005524|GO:0032508 | |
Blo04g01396 | 376 | Gene3D | - | 65 | 215 | IPR027417 | - | |
Blo04g01396 | 376 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 5 | 359 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 | |
Blo04g01396 | 376 | PANTHER | DNA HELICASE MCM9 | 5 | 359 | - | - | |
Blo04g01396 | 376 | Pfam | MCM AAA-lid domain | 250 | 331 | IPR041562 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g01396 | Blo-Chr4:33570200 | Blo10g00430 | Blo-Chr10:7793506 | 6.79E-43 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g01396 | K10738 | - | tcc:18608252 | 595.89 |