Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00015 ATGCAGCGGATGGAACCTATTGATGAGAGAGTGGACCTTGAATCCGACGAGGAGATCCCCTTGAGCTCATCACCGACCAGGAGGAAGCCGTTTCCTTTTCATTTGGATACGACCCATTTGCGCTCCTTTGCAGATGCGACCAATTCATGGAATTCTAAGCCTGTGCGGTTACGATCACTAAAGAGCATTTACTTGGTCTTGTTTAAAGCAAAAATCAACGTGTTGCTTCCTTTTGGTCCTCTGGCTATATTGCTCCATTATTTGACTGGGAAACATGGATGGGTCTTCTTCTTCACGTTAGTGGGCATCATACCTTTGGCCGAGCGACTTGGCTATGCCACCGAACAGCTCTCATTTTATACTGGACCTACAGTTGGGGGTCTTTTAAATGCTACATTTGGAAATGCAACAGAATTGATCGTTGCTTTGTATGCGTTAAAGAAAGGGATGATTAGGGTTGTTCAGCAATCTTTGTTGGGTTCAATCTTGTCAAATATGCTTTTGGTGCTTGGTTGTGCCTTCTTCACTGGTGGGATAGTTCATTGCAAGAAGATCCAGGTTTTCAATAAGGCAACTGCAATCGTGAACTCCGGATTGCTATTGATGGCTGTCATGGGGATACTGCTTCCTGCAGTGCTTCATTTCACGCATACAGAGGTGCATTTTGGGGAGTCAGAATTAGCTCTGTCAAGATTTAGTAGCTGTGTCATGCTAATAGCATACGCCAGCTACCTTTTCTTTCAATTCAAAAGCCAACATAATCATTATGATCCAATTGAGGCGGAAAGCGAGAATTGTTCAAATTCAGATGAAGCTCCTGAGATAACTAGCTGGGAAGCAATTGGGTGGCTTGCCATTTTGACCGTGTGGGTGTCTATCTTATCTGGATACTTCGTTGATGCCATCGAGGGCGCATCTGAGTCGGTAAACATCCCAGTGTCTTTCATCTGTGTCATTTTGCTTCCAATTGTTGGAAATGCGGCAGAACATGCAAGCGCCATCATGTTTGCTGTTAAAGATAAGCTTGATATTAGCCTTGGAGTTGCAATCGGATCGTCAACGCAAATATCAATGTTTGTTATTCCATTCTGCGTGGTTGTCGGGTGGTTCATGGGCGTACCGATGGACTTAAATTTTCAACTCTTTGAGACTGCCACTCTATTTATCGCAGTGATTGTAGTCGCGTTTATGCTACAGGAAGGCGCATCAAGCTATTTTAAGGGATTGATGCTTATACTATGCTATGTGATAGTAGGCGCCAGTTTTTTCTTCCACGTCGACCCTTCGAGCGGTGAGTAA 1299 44.19 MQRMEPIDERVDLESDEEIPLSSSPTRRKPFPFHLDTTHLRSFADATNSWNSKPVRLRSLKSIYLVLFKAKINVLLPFGPLAILLHYLTGKHGWVFFFTLVGIIPLAERLGYATEQLSFYTGPTVGGLLNATFGNATELIVALYALKKGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHCKKIQVFNKATAIVNSGLLLMAVMGILLPAVLHFTHTEVHFGESELALSRFSSCVMLIAYASYLFFQFKSQHNHYDPIEAESENCSNSDEAPEITSWEAIGWLAILTVWVSILSGYFVDAIEGASESVNIPVSFICVILLPIVGNAAEHASAIMFAVKDKLDISLGVAIGSSTQISMFVIPFCVVVGWFMGVPMDLNFQLFETATLFIAVIVVAFMLQEGASSYFKGLMLILCYVIVGASFFFHVDPSSGE 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 147481 150222 + BLOR14977 Blo05g00015 60449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00015 432 PANTHER VACUOLAR CATION/PROTON EXCHANGER 4 430 - -
Blo05g00015 432 Pfam Sodium/calcium exchanger protein 94 249 IPR004837 GO:0016021|GO:0055085
Blo05g00015 432 Pfam Sodium/calcium exchanger protein 281 418 IPR004837 GO:0016021|GO:0055085
Blo05g00015 432 TIGRFAM cax: calcium/proton exchanger 75 423 IPR004798 GO:0006816|GO:0015369
Blo05g00015 432 Gene3D - 266 422 IPR044880 -
Blo05g00015 432 Gene3D - 123 262 IPR044880 -
Blo05g00015 432 TIGRFAM caca2: calcium/proton exchanger 66 423 - -
Blo05g00015 432 MobiDBLite consensus disorder prediction 1 27 - -
Blo05g00015 432 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 430 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01049 Blo-Chr1:34017284 Blo05g00015 Blo-Chr5:147481 7.10E-116 dispersed
Blo02g00170 Blo-Chr2:1478787 Blo05g00015 Blo-Chr5:147481 0 dispersed
Blo03g00483 Blo-Chr3:16996489 Blo05g00015 Blo-Chr5:147481 9.26E-171 dispersed
Blo05g00015 Blo-Chr5:147481 Blo15g00403 Blo-Chr15:5754119 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00015 K07300 - fve:101299212 667.537