Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Blo05g00016	ATGTTAAGAAAGCTTGCGTTGGAGAACCTACGCCTATGGAGAAATACACCCAAAGGCTCAAATGATGAAGGTGATTCAGCTACTTGCGACGACAAACACTCAATGGATTTTGGCTCTGGTTCATCTGATCGCTCTGGCTTTGACAGTGACTACCATCCTCCACGTTTGAATCGCCATTATCAGAGAGCAAGTGCATTTGAACTGCCCTTCGTTGCTTTTCTCTTCTTGGTTTTAGTACGAGCTTCTCCAAGGCTCAATATGGTTCTGGGCAAGAAAGATGGTAACTTTTTCAGCTCTGGTCCCGCGCCCCCTCCCCCACCTTATTGGCCTCCGTCGACCCAATATAGTGGAAATCAAAACGCAGATCGCAATCCCAATCAAAATCAATCAGTCGGTGGTGGAAAGTCAGGAATAGGAGGAGGTGGAATTGCGGGAATTGTGATATCCATTCTTTTAGTTGGAGGTATAGCAGCCTTCTTTCTCATGAAGAGAAGAAGATCAAGGTCATCTTCAGATATGGAAAAGCTTAATGATCAACCTTTTGCCACTCTTTCCTCTGATGAAGTGCAAGAAATGAAGTCTCTACAAACTCCCTCCTCGCTCAACACAAAGACATTCGATACTTCTGCCACGGCAAACCTGATGCCACTGCCCATTGATCTTCACAAATCATTAAATAAGGAAGAACTCTCAAACAAAGCTATCGTCGTAAAAAGGAAGGCTCCTGCATTTCCTGTAGATGTAAAATCATTTTCAGTAGCAGATCTGCAGATAGCTACAAACAGCTTCAGTGTAGACAACCTTCTCGGGGAGGGGTCATTTGGGCGTGTTTATCGAGCTCAATTTGATGGGAAGGTTCTTGCTGTGAAAAAAATGGATTCGTATGTTCTTCCCGACGAATCATCTGAAGATTTCTCTGAGATCGTGTCAAAAGTCTCACAGCTGCATCATCCCAACGTAACTGAGCTGGTGGGGTATTGCTCAGAGCATGGGCAGCATCTCCTTGTGCATGAATTCCACAAAAATGGCTCCTTGCATAACTTCTTGCATTTGCCTGATGAACACAGCAAAACATTGACATGGAATTCCAGGGTAAAGATCTCATTGGGCACTGCACGGGCACTCGAGTATCTACACGAAGTTTGCTCTCCATCAATTGTTCATAGAAATATCAAGTCAGCTAACATATTGCTAGACTCAGAGCTCAATCCACACATCTCAGACTCCGGCCTGGCAAGTTGCATGCCAAATATAGAGCAGCTATTAGACCACAACAATGCCGAATTGGGATATAGTGCCCCTGAGGTGACGATGTCCGGCCAATATACTCTAAAAAGTGACGTCTACAGTTTTGGAGTCGTCATGCTAGAACTGCTCAGCGGTCGTGAACCATTCGACAGTTCAAGGCCGAGATCAGAGCAGTCTTTGGTTCGATGGGCAGCACCGCAGCTCCACGACATTGATGCTTTGGGTAAAATGGTCGACCCGGCATTGAAGAGGCTCTACTCTGTCAAATCTCTCTCCCGCTTTGCAGATGTCGTTGCGCTTTGTGTCCAACCGGAGCCTGAGTTCAGACCACCAATGTCGGAAGTGGTGCAAGCACTGGTTCGGCTTTTGCAGAGAGCAAATATGAGCAAAAGGACAATTGGAGGTGTATCTTTCCGGGTTGACAATCCGGAATCAGAAGAAAGATCTTAA	1698	45.82	MLRKLALENLRLWRNTPKGSNDEGDSATCDDKHSMDFGSGSSDRSGFDSDYHPPRLNRHYQRASAFELPFVAFLFLVLVRASPRLNMVLGKKDGNFFSSGPAPPPPPYWPPSTQYSGNQNADRNPNQNQSVGGGKSGIGGGGIAGIVISILLVGGIAAFFLMKRRRSRSSSDMEKLNDQPFATLSSDEVQEMKSLQTPSSLNTKTFDTSATANLMPLPIDLHKSLNKEELSNKAIVVKRKAPAFPVDVKSFSVADLQIATNSFSVDNLLGEGSFGRVYRAQFDGKVLAVKKMDSYVLPDESSEDFSEIVSKVSQLHHPNVTELVGYCSEHGQHLLVHEFHKNGSLHNFLHLPDEHSKTLTWNSRVKISLGTARALEYLHEVCSPSIVHRNIKSANILLDSELNPHISDSGLASCMPNIEQLLDHNNAELGYSAPEVTMSGQYTLKSDVYSFGVVMLELLSGREPFDSSRPRSEQSLVRWAAPQLHDIDALGKMVDPALKRLYSVKSLSRFADVVALCVQPEPEFRPPMSEVVQALVRLLQRANMSKRTIGGVSFRVDNPESEERS	565

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
5	158546	165086	+	BLOR14978	Blo05g00016	60450

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Blo05g00016	565	Gene3D	Phosphorylase Kinase; domain 1	223	339	-	-
	Blo05g00016	565	ProSiteProfiles	Protein kinase domain profile.	263	539	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Blo05g00016	565	MobiDBLite	consensus disorder prediction	15	50	-	-
	Blo05g00016	565	SUPERFAMILY	Protein kinase-like (PK-like)	245	535	IPR011009	-
	Blo05g00016	565	MobiDBLite	consensus disorder prediction	24	38	-	-
	Blo05g00016	565	PANTHER	PROTEIN STRUBBELIG-RECEPTOR FAMILY 6	85	551	-	-
	Blo05g00016	565	ProSitePatterns	Protein kinases ATP-binding region signature.	269	291	IPR017441	GO:0005524
	Blo05g00016	565	MobiDBLite	consensus disorder prediction	113	134	-	-
	Blo05g00016	565	Pfam	Protein tyrosine and serine/threonine kinase	265	535	IPR001245	GO:0004672\|GO:0006468
	Blo05g00016	565	CDD	STKc_IRAK	269	538	-	-
	Blo05g00016	565	Gene3D	Transferase(Phosphotransferase) domain 1	341	553	-	-
	Blo05g00016	565	PANTHER	OS01G0253100 PROTEIN	85	551	IPR045271	GO:0004714\|GO:0006468
	Blo05g00016	565	MobiDBLite	consensus disorder prediction	98	134	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Blo05g00016	Blo10g00947	CCT

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Blo05g00016	Blo-Chr5:158546	Blo13g00991	Blo-Chr13:32330973	3.93E-145	dispersed
	Blo10g00947	Blo-Chr10:28553228	Blo05g00016	Blo-Chr5:158546	0	wgd
	Blo05g00016	Blo-Chr5:158546	Blo07g00813	Blo-Chr7:26124914	0	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	84277	PF07714	PK_Tyr_Ser-Thr	2.20E-43	CL0016	Blo	PK

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Blo05g00016	-		-	rcu:8273036	632.869