Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00020 ATGCCCGACCCCTTCCTAAACCCCAACCCTAACATCTCTGCCTACTACCAGAACAGGGCGGCTCACACCGCTGTTGTCACCAGTGACTGGCTCGCCCAGGCTCAGGCTGCTGTTTCCCCTTACTCTGAGGACCATGCCTCTTCCGATCCTCTTGTTACGCCACCCAATTCCGGGAATACGTTCAGCGTGATTGATGAGTTCAACAACTGGCGGAAACAGCCTGATTTGGCTGAGGCCGTCGCCGCTTTCCGGGCTTTAGCCGCTGTTATTCGCACCAGCAAGGCCACTACCATGATGGAACTTGAAATTGAGCTCAAGAAAGCCTCAGATTCCCTTAAATCTTGGGATACAACTTCTATCTCTTTAACAGCAGGCTGCGATTTGTTCATTCGCTACGTAACTAGAACATCAGCTTTAGAATATGAGGACTTTAATTCAGCAAAGTCTCACTTAATTGAACGTGCAGAAAAATTTGGGGAGATATCATGTGAGGCACGTAGGACCATCGCAATGCTAAGTCAGGATTTCATTTTCGACGGTTGTACTATTTTGGTGCATGGTTTTTCAAGAGTCGTTCTGGAAGTTCTGAAGATGGCAGCACTGAAAAAAAAACTTTTTCGAGTATTTTGTACAGAGGGAAGACCAGACCGATCAGGGTTACGATTAGCTAATGAGCTGGTGAAGCTTGATATTCCAGTGAAGCTCCTAATTGATGCAGCTGTAGCGTATTCTATGGACGAGGTAGACATGGTTCTTGTTGGGGCTGATGGAGTAGTCGAAAGTGGAGGCATAATAAACATGATGGGGACATATCAAATTGCATTGGTGGCACACAGCATGACTAAGCCAGTGTATGTTGCTGCTGAGAGCTACAAGTTCGCTCGGCTCTACCCGTTGGACCAGAAAGATATGGCCCCTGCACTGCGTCCAATCGACTTCGGGGTACCTATCCCATCAAAAGTCGAGGTTGAAAAGTCTGCTCGGGATTACACTCCGCCCCAATATCTCACTCTGCTCTTTACTGATTTGGGTGTTCTCACTCCATCCGTTGTGAGCGACGAGCTCATCCAGCTATACTTGTGA 1083 47.83 MPDPFLNPNPNISAYYQNRAAHTAVVTSDWLAQAQAAVSPYSEDHASSDPLVTPPNSGNTFSVIDEFNNWRKQPDLAEAVAAFRALAAVIRTSKATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFIRYVTRTSALEYEDFNSAKSHLIERAEKFGEISCEARRTIAMLSQDFIFDGCTILVHGFSRVVLEVLKMAALKKKLFRVFCTEGRPDRSGLRLANELVKLDIPVKLLIDAAVAYSMDEVDMVLVGADGVVESGGIINMMGTYQIALVAHSMTKPVYVAAESYKFARLYPLDQKDMAPALRPIDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 188897 190949 + BLOR14982 Blo05g00020 60454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00020 360 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 11 360 - -
Blo05g00020 360 SUPERFAMILY NagB/RpiA/CoA transferase-like 76 359 IPR037171 -
Blo05g00020 360 Coils Coil 98 118 - -
Blo05g00020 360 Pfam Initiation factor 2 subunit family 74 348 IPR000649 GO:0044237
Blo05g00020 360 Gene3D - 59 161 IPR042528 -
Blo05g00020 360 Gene3D - 164 360 IPR042529 -
Blo05g00020 360 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 11 360 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00020 Blo-Chr5:188897 Blo06g01193 Blo-Chr6:35444512 8.32E-15 dispersed
Blo05g00020 Blo-Chr5:188897 Blo08g00378 Blo-Chr8:6294316 8.58E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00020 K03239 - csv:101211420 608.601