Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo05g00053 | ATGGTTCATTTTCTGGGCACCATTCGCCCTCCGTCTCGCCTGAGCCTTTTCGTACCTGGCGGGAGAAAACTACCTTTCCGTAGCTCCCTTCTTATTCTGGGCGCTTCTCCAAGGTTTCCTTCATTCACGCCGATTTTTCAGGCTTGTCTACGATCTAATTTTTCAAGTAAAAATGATGGAGATCAATTATCATCTAGCCAACCTGAAGTTATATTTATGGGTACGGGAACCAGTGAAGGAATTCCCCGAGTGAGCTGTTTGACTAATCCGCTGAAGCAATGCCCAGTGTGCTCTAAAGCTGTGGAACCAGCCAATAAGAACAAAAGACTCAATACTAGCATTCTTATCCGTTATCCCATGTCCTCTGGAACACGCAACATTCTTGTAGATGCTGGAAAGATAAGAACAATTGATGCTGTAATTATCACTCACTCTCATGCTGATGCAATTGGAGGTCTCGATGATCTTCGGGATTGGACAAACAATGTTCAACCCTCTATTCCCATATATGTTGCCCAACTCTGGCATGGTCAAGGTTATCGCTCTCTTGGTTTTCGTTTTGGTAATGTTTGTTACATCAGTGATGTTAGTGAAATACCTGAAGAAACGTACCCACTTTTGAAGGATTCTGAAATTCTCATTCTGGATGCATTAAGACCGGATAGATCTTCTGCAACCCATTTTGGACTTCCAAGAGCTCTTGAAGAAGTACGGAAAATCCAACCAAAAAGAACTTTGTTCACTGGGATGATGCATTTGATGGATCATGAGAAAGTGAACAATTATCTTATAAATTTGAAGGAGACTGAGGGTCTTGATGTCCAACTCAGTTTTGACGGACTTCGCGTACCAGATTTTCGAAAAAAGGGTAAGGAAATTTGCAGCTGTCTCAGATCGGGGAAGATGGTGAACATGAAAGGTTTGCAGTTCCAGCAAGTTTTGGAGGAGAACGTGTCTAATTTGACTTCAGCTTCGGGTGATCAAGCAAGTGTATCCTCGGGTCATAGAAATCAGCCATACCCGAGTCAACAGATTCAAAATCTTCAACCTTCAGCAAAGAAGAAGAGAAATCTTCCTGGCAATCCAGACCCAGGAGCAGAAGTGATAGCTTTGTCACCCAAGACTCTAATGGCGACGAACAGATTCATCTGCGAGATCTGCAACAAAGGGTTTCAGAGAGATCAAAACCTGCAACTTCACCGGAGAGGGCATAATCTGCCATGGAAACTGAAGCAGAGATCAAGCAAAGAGGTGAAGAAGAAGGTTTACGTTTGCCCAGAAACAAGCTGCGTCCACCATGACCCTTCGAGAGCTCTGGGCGACCTAACTGGCATCAAGAAACACTTCTGCAGAAAGCATGGCGAAAAGAAGTGGAAATGTGACAAATGCTCGAAGAAATATGCTGTCCAATCAGATTGGAAGGCTCATTCCAAAACCTGTGGAACAAGAGAGTATAGATGTGATTGTGGAACCCTTTTCTCCAGGCGGGATAGTTTCATTACTCACAGAGCCTTCTGCGACGCTTTGGCAGAAGAAAGTAGTAGAACTAACGTTGCTGCAGCCAACCCACTTCTCTCCTCTCGTCAATCTGCTTCTTCTTCTTCCATCTCCCTCTTACCATCTCCGCCATTGTTCAGTTCTCAAAACCCACATCCATTTTCTTCTCTCAAAAAGGAGCATCAGCCTCTCTCTCTCAGATCAGACTGTCCTACTTGGCTCCCCTCTCTTGCCCCACCTCCCGTTGATTTCCAATCACCGCCGTCCATCTTCTCCTCGGCCTTAAACGGTGATTTTACGCAAACCCACCACGATTTATCCCTCCTTCAAACTCCTCGACAGTCTAACCCTAATCTGGGTCCTACTCCTCCTCTTTACCAGTCGTCTCTTTCCCCTCACATATCAGCCACTGCATTGCTTCAGAAGGCAGCTCGGATGGGTGCCACCGTCAGCACGAAAACGGCGTCTTTATCTACTCCGGCAACGATGACAAATCCGAACCAGATTTTGGAGAATTCCGCCATTAATACAGCCAGTGGCTTTGGCTTCAACCTTTCTGCCAGTGAAGGTTTTCCTCATTCATTACCAAGTACTTACGGGAATTCTCTAACCTCTACGTCTGGGTTTGAAGAATCTTCTTTCGAGGAAGCATTTGGAGGGATTATGACGCAAAAGAAAGCTGTGAATATGAACGACATTATCATGGCAAAAACAAGTTCTGCAATTTCATACATGAGCAGCAAAAATGAAGGAGGTGGAAATGGCGAAAGTTTGACCAGAGACTTCTTGGGTCTGAGAGCTTTCTCCCACAGCGATATTCTTAATATTACAAGCTTTGGAAACTCCATCAACACTCTGCAGAATCACCAAAAGCCATGGCAAGGCTAG | 2385 | 44.91 | MVHFLGTIRPPSRLSLFVPGGRKLPFRSSLLILGASPRFPSFTPIFQACLRSNFSSKNDGDQLSSSQPEVIFMGTGTSEGIPRVSCLTNPLKQCPVCSKAVEPANKNKRLNTSILIRYPMSSGTRNILVDAGKIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPSIPIYVAQLWHGQGYRSLGFRFGNVCYISDVSEIPEETYPLLKDSEILILDALRPDRSSATHFGLPRALEEVRKIQPKRTLFTGMMHLMDHEKVNNYLINLKETEGLDVQLSFDGLRVPDFRKKGKEICSCLRSGKMVNMKGLQFQQVLEENVSNLTSASGDQASVSSGHRNQPYPSQQIQNLQPSAKKKRNLPGNPDPGAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVKKKVYVCPETSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESSRTNVAAANPLLSSRQSASSSSISLLPSPPLFSSQNPHPFSSLKKEHQPLSLRSDCPTWLPSLAPPPVDFQSPPSIFSSALNGDFTQTHHDLSLLQTPRQSNPNLGPTPPLYQSSLSPHISATALLQKAARMGATVSTKTASLSTPATMTNPNQILENSAINTASGFGFNLSASEGFPHSLPSTYGNSLTSTSGFEESSFEEAFGGIMTQKKAVNMNDIIMAKTSSAISYMSSKNEGGGNGESLTRDFLGLRAFSHSDILNITSFGNSINTLQNHQKPWQG | 794 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 512809 | 521844 | + | BLOR15015 | Blo05g00053 | 60487 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo05g00053 | 794 | Gene3D | - | 65 | 174 | IPR036866 | - | |
| Blo05g00053 | 794 | Gene3D | - | 175 | 284 | IPR036866 | - | |
| Blo05g00053 | 794 | MobiDBLite | consensus disorder prediction | 324 | 354 | - | - | |
| Blo05g00053 | 794 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 382 | 404 | IPR013087 | - | |
| Blo05g00053 | 794 | CDD | metallo-hydrolase-like_MBL-fold | 69 | 217 | - | - | |
| Blo05g00053 | 794 | MobiDBLite | consensus disorder prediction | 324 | 364 | - | - | |
| Blo05g00053 | 794 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 384 | 404 | IPR013087 | - | |
| Blo05g00053 | 794 | Pfam | Metallo-beta-lactamase superfamily | 132 | 187 | IPR001279 | - | |
| Blo05g00053 | 794 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 320 | 778 | - | - | |
| Blo05g00053 | 794 | PANTHER | PROTEIN INDETERMINATE-DOMAIN 7 | 320 | 778 | - | - | |
| Blo05g00053 | 794 | SUPERFAMILY | beta-beta-alpha zinc fingers | 381 | 478 | IPR036236 | - | |
| Blo05g00053 | 794 | Gene3D | Classic Zinc Finger | 380 | 480 | - | - | |
| Blo05g00053 | 794 | SUPERFAMILY | Metallo-hydrolase/oxidoreductase | 69 | 283 | IPR036866 | - | |
| Blo05g00053 | 794 | SMART | c2h2final6 | 458 | 478 | IPR013087 | - | |
| Blo05g00053 | 794 | SMART | c2h2final6 | 382 | 404 | IPR013087 | - | |
| Blo05g00053 | 794 | SMART | c2h2final6 | 423 | 453 | IPR013087 | - | |
| Blo05g00053 | 794 | SMART | Lactamase_B_5a | 110 | 250 | IPR001279 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo01g01463 | Blo-Chr1:53803380 | Blo05g00053 | Blo-Chr5:512809 | 5.99E-124 | dispersed | |
| Blo05g00053 | Blo-Chr5:512809 | Blo05g00787 | Blo-Chr5:28977306 | 9.87E-116 | dispersed | |
| Blo06g00421 | Blo-Chr6:24350637 | Blo05g00053 | Blo-Chr5:512809 | 1.97E-115 | transposed | |
| Blo11g00226 | Blo-Chr11:1835017 | Blo05g00053 | Blo-Chr5:512809 | 3.53E-08 | transposed | |
| Blo10g00983 | Blo-Chr10:29046214 | Blo05g00053 | Blo-Chr5:512809 | 3.76E-178 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 12370 | PF00753 | Lactamase_B | 5.30E-07 | CL0381 | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo05g00053 | K25870 | - | jre:109012370 | 558.14 |