Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00053 ATGGTTCATTTTCTGGGCACCATTCGCCCTCCGTCTCGCCTGAGCCTTTTCGTACCTGGCGGGAGAAAACTACCTTTCCGTAGCTCCCTTCTTATTCTGGGCGCTTCTCCAAGGTTTCCTTCATTCACGCCGATTTTTCAGGCTTGTCTACGATCTAATTTTTCAAGTAAAAATGATGGAGATCAATTATCATCTAGCCAACCTGAAGTTATATTTATGGGTACGGGAACCAGTGAAGGAATTCCCCGAGTGAGCTGTTTGACTAATCCGCTGAAGCAATGCCCAGTGTGCTCTAAAGCTGTGGAACCAGCCAATAAGAACAAAAGACTCAATACTAGCATTCTTATCCGTTATCCCATGTCCTCTGGAACACGCAACATTCTTGTAGATGCTGGAAAGATAAGAACAATTGATGCTGTAATTATCACTCACTCTCATGCTGATGCAATTGGAGGTCTCGATGATCTTCGGGATTGGACAAACAATGTTCAACCCTCTATTCCCATATATGTTGCCCAACTCTGGCATGGTCAAGGTTATCGCTCTCTTGGTTTTCGTTTTGGTAATGTTTGTTACATCAGTGATGTTAGTGAAATACCTGAAGAAACGTACCCACTTTTGAAGGATTCTGAAATTCTCATTCTGGATGCATTAAGACCGGATAGATCTTCTGCAACCCATTTTGGACTTCCAAGAGCTCTTGAAGAAGTACGGAAAATCCAACCAAAAAGAACTTTGTTCACTGGGATGATGCATTTGATGGATCATGAGAAAGTGAACAATTATCTTATAAATTTGAAGGAGACTGAGGGTCTTGATGTCCAACTCAGTTTTGACGGACTTCGCGTACCAGATTTTCGAAAAAAGGGTAAGGAAATTTGCAGCTGTCTCAGATCGGGGAAGATGGTGAACATGAAAGGTTTGCAGTTCCAGCAAGTTTTGGAGGAGAACGTGTCTAATTTGACTTCAGCTTCGGGTGATCAAGCAAGTGTATCCTCGGGTCATAGAAATCAGCCATACCCGAGTCAACAGATTCAAAATCTTCAACCTTCAGCAAAGAAGAAGAGAAATCTTCCTGGCAATCCAGACCCAGGAGCAGAAGTGATAGCTTTGTCACCCAAGACTCTAATGGCGACGAACAGATTCATCTGCGAGATCTGCAACAAAGGGTTTCAGAGAGATCAAAACCTGCAACTTCACCGGAGAGGGCATAATCTGCCATGGAAACTGAAGCAGAGATCAAGCAAAGAGGTGAAGAAGAAGGTTTACGTTTGCCCAGAAACAAGCTGCGTCCACCATGACCCTTCGAGAGCTCTGGGCGACCTAACTGGCATCAAGAAACACTTCTGCAGAAAGCATGGCGAAAAGAAGTGGAAATGTGACAAATGCTCGAAGAAATATGCTGTCCAATCAGATTGGAAGGCTCATTCCAAAACCTGTGGAACAAGAGAGTATAGATGTGATTGTGGAACCCTTTTCTCCAGGCGGGATAGTTTCATTACTCACAGAGCCTTCTGCGACGCTTTGGCAGAAGAAAGTAGTAGAACTAACGTTGCTGCAGCCAACCCACTTCTCTCCTCTCGTCAATCTGCTTCTTCTTCTTCCATCTCCCTCTTACCATCTCCGCCATTGTTCAGTTCTCAAAACCCACATCCATTTTCTTCTCTCAAAAAGGAGCATCAGCCTCTCTCTCTCAGATCAGACTGTCCTACTTGGCTCCCCTCTCTTGCCCCACCTCCCGTTGATTTCCAATCACCGCCGTCCATCTTCTCCTCGGCCTTAAACGGTGATTTTACGCAAACCCACCACGATTTATCCCTCCTTCAAACTCCTCGACAGTCTAACCCTAATCTGGGTCCTACTCCTCCTCTTTACCAGTCGTCTCTTTCCCCTCACATATCAGCCACTGCATTGCTTCAGAAGGCAGCTCGGATGGGTGCCACCGTCAGCACGAAAACGGCGTCTTTATCTACTCCGGCAACGATGACAAATCCGAACCAGATTTTGGAGAATTCCGCCATTAATACAGCCAGTGGCTTTGGCTTCAACCTTTCTGCCAGTGAAGGTTTTCCTCATTCATTACCAAGTACTTACGGGAATTCTCTAACCTCTACGTCTGGGTTTGAAGAATCTTCTTTCGAGGAAGCATTTGGAGGGATTATGACGCAAAAGAAAGCTGTGAATATGAACGACATTATCATGGCAAAAACAAGTTCTGCAATTTCATACATGAGCAGCAAAAATGAAGGAGGTGGAAATGGCGAAAGTTTGACCAGAGACTTCTTGGGTCTGAGAGCTTTCTCCCACAGCGATATTCTTAATATTACAAGCTTTGGAAACTCCATCAACACTCTGCAGAATCACCAAAAGCCATGGCAAGGCTAG 2385 44.91 MVHFLGTIRPPSRLSLFVPGGRKLPFRSSLLILGASPRFPSFTPIFQACLRSNFSSKNDGDQLSSSQPEVIFMGTGTSEGIPRVSCLTNPLKQCPVCSKAVEPANKNKRLNTSILIRYPMSSGTRNILVDAGKIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPSIPIYVAQLWHGQGYRSLGFRFGNVCYISDVSEIPEETYPLLKDSEILILDALRPDRSSATHFGLPRALEEVRKIQPKRTLFTGMMHLMDHEKVNNYLINLKETEGLDVQLSFDGLRVPDFRKKGKEICSCLRSGKMVNMKGLQFQQVLEENVSNLTSASGDQASVSSGHRNQPYPSQQIQNLQPSAKKKRNLPGNPDPGAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVKKKVYVCPETSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESSRTNVAAANPLLSSRQSASSSSISLLPSPPLFSSQNPHPFSSLKKEHQPLSLRSDCPTWLPSLAPPPVDFQSPPSIFSSALNGDFTQTHHDLSLLQTPRQSNPNLGPTPPLYQSSLSPHISATALLQKAARMGATVSTKTASLSTPATMTNPNQILENSAINTASGFGFNLSASEGFPHSLPSTYGNSLTSTSGFEESSFEEAFGGIMTQKKAVNMNDIIMAKTSSAISYMSSKNEGGGNGESLTRDFLGLRAFSHSDILNITSFGNSINTLQNHQKPWQG 794
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 512809 521844 + BLOR15015 Blo05g00053 60487
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00053 794 Gene3D - 65 174 IPR036866 -
Blo05g00053 794 Gene3D - 175 284 IPR036866 -
Blo05g00053 794 MobiDBLite consensus disorder prediction 324 354 - -
Blo05g00053 794 ProSiteProfiles Zinc finger C2H2 type domain profile. 382 404 IPR013087 -
Blo05g00053 794 CDD metallo-hydrolase-like_MBL-fold 69 217 - -
Blo05g00053 794 MobiDBLite consensus disorder prediction 324 364 - -
Blo05g00053 794 ProSitePatterns Zinc finger C2H2 type domain signature. 384 404 IPR013087 -
Blo05g00053 794 Pfam Metallo-beta-lactamase superfamily 132 187 IPR001279 -
Blo05g00053 794 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 320 778 - -
Blo05g00053 794 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 320 778 - -
Blo05g00053 794 SUPERFAMILY beta-beta-alpha zinc fingers 381 478 IPR036236 -
Blo05g00053 794 Gene3D Classic Zinc Finger 380 480 - -
Blo05g00053 794 SUPERFAMILY Metallo-hydrolase/oxidoreductase 69 283 IPR036866 -
Blo05g00053 794 SMART c2h2final6 458 478 IPR013087 -
Blo05g00053 794 SMART c2h2final6 382 404 IPR013087 -
Blo05g00053 794 SMART c2h2final6 423 453 IPR013087 -
Blo05g00053 794 SMART Lactamase_B_5a 110 250 IPR001279 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01463 Blo-Chr1:53803380 Blo05g00053 Blo-Chr5:512809 5.99E-124 dispersed
Blo05g00053 Blo-Chr5:512809 Blo05g00787 Blo-Chr5:28977306 9.87E-116 dispersed
Blo06g00421 Blo-Chr6:24350637 Blo05g00053 Blo-Chr5:512809 1.97E-115 transposed
Blo11g00226 Blo-Chr11:1835017 Blo05g00053 Blo-Chr5:512809 3.53E-08 transposed
Blo10g00983 Blo-Chr10:29046214 Blo05g00053 Blo-Chr5:512809 3.76E-178 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12370 PF00753 Lactamase_B 5.30E-07 CL0381 Blo TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00053 K25870 - jre:109012370 558.14