Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00055 ATGGGGATCCTATCGATTACAGGGCTGATCACAATATGTCTTGCTTTCTGCTGCTCATCGCTACCCAGAGTTGCAGATCATGTTGTCCGAAAACATCATGGGAGGTCTCATAATACTGCAAGTTCTCCAAGTATTTCGATCACGCCGGCAGTGTCGCCTTCTTTGTTTCCACGTGGACATCATCACAGGAAGAGCAAATTCAGGAGCTCTGCTCCGGAGCCAGCTTATCAAATATCCCCATCAGCTTATAATCGCCAAGGGCCTATTCTTCCTCCTACATCCGCTCCTCTGGGTCCCACGAACAAGAACAGAAATTCACCGCTATCACCCGTTTTGACGCTACCCCCTCCGCCTCCTAATCAAGATTGTTTACCAGTTACATGCACAGAGCCATTGACATATACACTTCCTGGATCGCCCTGCGGTTGTGTGTGGCCAATTCAAGTAAAACTTAGCCTTGGAGTTGGAATTTACACATTTTTTCCTTTAGTTTCTATGCTGACTGATGAAATTGCCGAGAGTGTCGTGCTAAATCTTAGTCAAGTTCGTGTGATGGGAGCAGATGCAGCGAGTCAGCAGATTGAGAAAACCACAGTTATTATCAACTTGATCCCAAAGGGAGTAATCTTTAATTATGACACTGCTTTGTTAATCTATCAGAAGTTCTGGCATGGGAAGATCTCCATTAACGCTTCCATTTTTGGTGCCTACACAGTTCTATATGTCCACTACCCAGGTCTTCCACCATCTCCACCTTCATCTTCTTTGACCATTTCCACCATTGACAACGGCCCAAGCCATGGAGATTATAATGGAGGAAACGCGATAAAACCTCTGGGAGTTGACATTCCGAGGAGGAGAAAAGAAGGGCATGGTGCAAATATGATTGTCGTGATCATTTTATCGTCTGTCACTGCCTTTGTCGTTTGCGTGGGATTTGTTTGGATTTTGCTTTTGAAATGCAGACGCTCTTCCCATCAACCCCAACAAGTCCAGCATGCCTTAATGCCTTCCCTTGAAAAACAGCAAGGCAACGTTGGAAGTGCTCCTGGCTCTGCATCAATGTCCTTCGGTTCTGGAGCTATCACTTACACGGGATCTGCTAAGAACTTCTCGATAAAAGAACTAGAAAGAGCGACTAGTAACTTTGCTACCTCTAGAATACTCGGAGAAGGCGGCTTTGGACTTGTCTACCAGGGGATTTTGGATGATGGAAGGGAAGTTGCAGTGAAGGTTCTCAAAAGAGACGATCAACATGGGACCCGCGAATTCTTGGCCGAAGTTGAAATGCTTAGCCGCCTCCATCACAGAAATTTAGTCAAACTAATCGGTATCTCTACGGAAGATCAAACTCGCTGCCTGATCTATGAACTTGTGCCAAACGGTAGTGTCGAATCTCGATTACACGGTATTGACAAAGAAACCGATCCACTTGATTGGGATGCTCGAATGAAGATTGCACTTGGCGCAGCTCGAGGCTTGGCCTACTTACACGAAGACTCCAACCCGCGTGTAATTCATCGGGACTTCAAGTCCAGCAACATCTTGTTGGAGCATGATTTTACGCCTAAAGTTGCAGATTTTGGATTGGCCAGGACGGCATTAGAGGAGAATAAACACATATCCACTCATGTGATGGGAACTTTCGGTTATTTAGCACCGGAGTATGCGATGACTGGCCATCTTCTCGTAAAAAGTGATGTCTACAGCTATGGAGTCGTCTTGCTAGAGCTTCTCACAGGAAGGAAGCCGGTGGACTTGTTGCTCCCTCCGGGCCAGGAAAACCTCGTGGCTTGGGCCCGGCCTCTCCTCGGGAGTAAGGAAGGGCTGGAGATGATAATAGACACGAATATAAAGTCTGATATCTCATTTGACAGCTTGGCCAAAGTTGCTGCCATTGCTTCGATGTGTGTCCAACCGGAAGTGTCTCATCGTCCTTTCATGGGCGAAGTCCTGCAGGCTTTGAAACTCGTATGCAATGAGTTCGACGAAGCAAAACAGCTCGGAGGGTCAAGTTTTAGCCAAGAGGAATTCATGAGTCATTTTAGCACCAAGTTGACGAGCTTCTCCTGCGAGATCAAAGCCAACGACGAAGAACCGGTCCAATCAAAGCCATTTCCGGCAGGAGGGCAGGGCCTTAGCCAGGAAGCGATGATTAAATTTTCCGCATCAGATTTGGCAAGTGCAACAGGAGTTGAGAGGCACGAATTTGAGTCTTTCAGGTGGTATTCTGCTTCAGAGCCACTAAGAACTGGAAGAAGAAGACAAAGGCATTTTTGGCAAAGGTTGAGAAGTTTGTCAAGAGGTAGTATGAGTGAGCATGGTTTTGCTTCCAAGTTCTGGTCTGGATTTCATTAG 2358 46.61 MGILSITGLITICLAFCCSSLPRVADHVVRKHHGRSHNTASSPSISITPAVSPSLFPRGHHHRKSKFRSSAPEPAYQISPSAYNRQGPILPPTSAPLGPTNKNRNSPLSPVLTLPPPPPNQDCLPVTCTEPLTYTLPGSPCGCVWPIQVKLSLGVGIYTFFPLVSMLTDEIAESVVLNLSQVRVMGADAASQQIEKTTVIINLIPKGVIFNYDTALLIYQKFWHGKISINASIFGAYTVLYVHYPGLPPSPPSSSLTISTIDNGPSHGDYNGGNAIKPLGVDIPRRRKEGHGANMIVVIILSSVTAFVVCVGFVWILLLKCRRSSHQPQQVQHALMPSLEKQQGNVGSAPGSASMSFGSGAITYTGSAKNFSIKELERATSNFATSRILGEGGFGLVYQGILDDGREVAVKVLKRDDQHGTREFLAEVEMLSRLHHRNLVKLIGISTEDQTRCLIYELVPNGSVESRLHGIDKETDPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKSSNILLEHDFTPKVADFGLARTALEENKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLLLPPGQENLVAWARPLLGSKEGLEMIIDTNIKSDISFDSLAKVAAIASMCVQPEVSHRPFMGEVLQALKLVCNEFDEAKQLGGSSFSQEEFMSHFSTKLTSFSCEIKANDEEPVQSKPFPAGGQGLSQEAMIKFSASDLASATGVERHEFESFRWYSASEPLRTGRRRQRHFWQRLRSLSRGSMSEHGFASKFWSGFH 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 538324 541885 + BLOR15017 Blo05g00055 60489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00055 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Blo05g00055 785 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Blo05g00055 785 CDD STKc_IRAK 389 656 - -
Blo05g00055 785 Gene3D Transferase(Phosphotransferase) domain 1 459 675 - -
Blo05g00055 785 MobiDBLite consensus disorder prediction 72 88 - -
Blo05g00055 785 MobiDBLite consensus disorder prediction 34 110 - -
Blo05g00055 785 Pfam Protein tyrosine and serine/threonine kinase 386 655 IPR001245 GO:0004672|GO:0006468
Blo05g00055 785 SUPERFAMILY Protein kinase-like (PK-like) 364 656 IPR011009 -
Blo05g00055 785 PANTHER OS01G0750732 PROTEIN 33 784 - -
Blo05g00055 785 PANTHER OS01G0750732 PROTEIN 33 784 - -
Blo05g00055 785 Gene3D Phosphorylase Kinase; domain 1 359 458 - -
Blo05g00055 785 ProSiteProfiles Protein kinase domain profile. 383 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00055 Blo-Chr5:538324 Blo10g00615 Blo-Chr10:18934834 0 dispersed
Blo05g00055 Blo-Chr5:538324 Blo08g00343 Blo-Chr8:5295649 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84278 PF07714 PK_Tyr_Ser-Thr 1.00E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00055 - - qsu:112040667 916.376