Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo05g00074 | ATGGGGAAGGCTACGAGATGGTTCAAAGGGCTGTTCGGGATGAAAAAGGACAAGGCCCAGCAACCGGAGAATTCAAAGATAAAAGCTTTCGAGAAGAACGAGACGAGGAGGTGGAGTTTCACAAAGTCAGGAACGGATTCCTCTGTCGGTGGGCGGCCTCAGCTTCCGGTCACGGCGGCTCCGTCTTCAAATGTTTCTGCTGCAGACGCGGCTTGGTTGAGATCCTTCTTTGCTGCGTCTGAAAAAGACCAGAACAAGCACGCAATCGCAGTCGCAGCGGCCACTGCAGCTGCTGCCGACGCCGCAGTTGCCGCAGCCCAGGCGGCCGTCGCGGTCGTCAGGCTGACGAGCAGAGGGGGAGGAGCCCTGTTTCTCGGCGGCAGAGAAAAGTGGGCTGCCGTCAAGATTCAAACTGTTTTCAGAAGCTATTTGGCTCGAAAGGCTCTACGAGCTCTCAGAGGACTGGTTAAGATTCAGGCTCTGGTTAGAGGCTTTCTCGTCAGAAAACGGGCCGCTGCAACTCTCCATAGTATGCAAGCTCTCATTAGAGCTCAAGCTGCTGCTCGGTCTGAACGAGCGCGTCGTTCGTTCAATCACGACAACAGATTTCTCCCCCAAATCCGATCCCGAAAATCGACTAGGATGTCGGCGTCGTATGAATCTTCGATTGACGAAAGCCCTAAGATCGTCGAAATCGATACCTGCAAACCTAGATCGAGGTCTCGGCGATTCACTTCCGTATATTCCGAATGTGGAGAAGACGTACCTTCTCCTTTTCCGAATCCCGTTCCGCCTCGCATTTCCGTTCCGGATTGCAGACACATTCAAGACTTCGACTATTGCTTCATCGGCGACGACTGCAAGTTCCCCACCGCTCAGAGCACGCCTCGATTGACAACCTCCATGCGCTCCAACGCTCCGGTGACGCCGTCAAAGAGCGTCTGCGGCGAAGCCTTCTTCCGGCCGTACATAAACTTTCCAAATTACATGGCGAACACTCAATCATTCAACGCGAAATTGCGATCATACAGTGCTCCCAAGCAAAGACCAGAAACAGGGTCGAAGAAGAGACTCTCGCTCAATGAAATAATGGCAGCCAGAAACAGTCTCAGCAGCGTCAAAATGCAGAGGCCATACTACCAAATCCTAGAGTAA | 1155 | 52.99 | MGKATRWFKGLFGMKKDKAQQPENSKIKAFEKNETRRWSFTKSGTDSSVGGRPQLPVTAAPSSNVSAADAAWLRSFFAASEKDQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSRGGGALFLGGREKWAAVKIQTVFRSYLARKALRALRGLVKIQALVRGFLVRKRAAATLHSMQALIRAQAAARSERARRSFNHDNRFLPQIRSRKSTRMSASYESSIDESPKIVEIDTCKPRSRSRRFTSVYSECGEDVPSPFPNPVPPRISVPDCRHIQDFDYCFIGDDCKFPTAQSTPRLTTSMRSNAPVTPSKSVCGEAFFRPYINFPNYMANTQSFNAKLRSYSAPKQRPETGSKKRLSLNEIMAARNSLSSVKMQRPYYQILE | 384 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 735387 | 737102 | - | BLOR15036 | Blo05g00074 | 60508 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo05g00074 | 384 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 379 | - | - | |
| Blo05g00074 | 384 | Gene3D | - | 72 | 154 | - | - | |
| Blo05g00074 | 384 | ProSiteProfiles | IQ motif profile. | 177 | 206 | IPR000048 | GO:0005515 | |
| Blo05g00074 | 384 | SMART | iq_5 | 128 | 150 | IPR000048 | GO:0005515 | |
| Blo05g00074 | 384 | SMART | iq_5 | 151 | 172 | IPR000048 | GO:0005515 | |
| Blo05g00074 | 384 | PANTHER | - | 1 | 379 | - | - | |
| Blo05g00074 | 384 | ProSiteProfiles | IQ motif profile. | 129 | 157 | IPR000048 | GO:0005515 | |
| Blo05g00074 | 384 | Pfam | IQ calmodulin-binding motif | 131 | 150 | IPR000048 | GO:0005515 | |
| Blo05g00074 | 384 | Pfam | IQ calmodulin-binding motif | 156 | 170 | IPR000048 | GO:0005515 | |
| Blo05g00074 | 384 | Pfam | Protein of unknown function (DUF4005) | 293 | 372 | IPR025064 | - | |
| Blo05g00074 | 384 | ProSiteProfiles | IQ motif profile. | 153 | 180 | IPR000048 | GO:0005515 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo05g00074 | Blo10g00997 | CCT | |
| Blo05g00074 | Blo10g00997 | ECH | |
| Blo05g00074 | Blo06g00714 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo05g00074 | Blo-Chr5:735387 | Blo15g00158 | Blo-Chr15:1622332 | 4.09E-29 | dispersed | |
| Blo10g00997 | Blo-Chr10:29222809 | Blo05g00074 | Blo-Chr5:735387 | 2.30E-101 | wgd | |
| Blo14g00521 | Blo-Chr14:7389636 | Blo05g00074 | Blo-Chr5:735387 | 4.06E-106 | wgd | |
| Blo05g00074 | Blo-Chr5:735387 | Blo06g00714 | Blo-Chr6:30238211 | 0 | wgd | |
| Blo05g00074 | Blo-Chr5:735387 | Blo08g00322 | Blo-Chr8:4751322 | 2.80E-107 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo05g00074 | - | - | qsu:111988320 | 453.751 |