Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00080 ATGGGTTATGGACCAGGGCTCATAAATTTGGGTCAGCCCAATAAATACGTTGAAACTGGATCGGGCGATCGTGGTGTCCAGGTCAGCTTCCAGCTCGGCGTAGTGGACCCCACCAGTCTATTGTCCATTGCAGAAGAAACTTTAGCAGAATTTTCTAAGCCCACTGGAACTGCAGTGGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCTATTGGAAACGTTGCTATTTCTCATGGTTGCTCTGGAGTGGCAGCTCGAGCTTGTGGCCTGGAGCCTACAAGGGTTGCAGAAGTCCTCAAGGATGGGCCATTGTGGTTTCGTGATTGTCGAGCTGTGGATGTGCTTAATGTGCTGCCAACTGCAAATGGTGGAACCATTGAGTTGCTTTATATGCAGTTGTATGCTCCAACAACATTAACACCTGCTCGTGACTTCTGGTTGCTTCGCTACACTTCTGTTTTAGAAGATGGCAGCCTTGTTGAAAGTATGACCCCTTTTCTCGTTATAATATGGCTTCTGTCTCATGATTTGACTTCACTCGCTTTTAAGAACTCAGTAAAAAGTAATTTCTCCCCATCTGAGAATTACATTAGAAAGAGAATTCTTAAGATATTTAAAGCTATAAACCCAGTTGACAATAAAAAATTAATTTTATCTCATAGATATATTTGCGGAGATTTATCTTTAAAAAAAAATGTCATTGTGATAAATTCAAATAGTTTACCAACAATATTAATCCAGTTTTATAGCTCACATCTGGATGGCATGGATGATGTTACTATCCTTGTAAACTCGTCTCCTGACAAACTAATGGGCTTAAACCTTTCATTTGCAAATGGATTTTCTGCTGTTGGCAATGCAGTTTTATGTGCCAAAGCATCAATATTGTTGGAGTCAGTTAATGTGAGTTTTCAGTTCTTTCAGAATGTTCCTCCTGCAATCCTTCTTAGGTTTCTACGGGAGCACTGCTCAGAATGGCCAGGGACAGGAGTTGGAAGTTTTGAGAGTCAAGTAATACTTCCATTGGCTCACACTATCGAACATGAAGAGTTCCTGGAAGTCATAAAGCTGGAAGGTGTTGGCCATTCTCCTGAAGAGGCAAGGGAAATGTTTCTCTTGCAAGTAGGTGTTGAATTTGCATTTGAGAGCCACATGCAAGAACACATGGCATCAATCGCTCGGCAATATGTTCGAAACATCATATCATCTGTTCAGAGGGTGGCATTGGCCTCTCTCCCCTCATTTGAATTCACCAGCTGGTCTACGCCCTTCACTTGGACCCATGGGCATTGCCCTTATCCTACTCTTCTTCACAATCTCTCTCATGGCTTCTGCCTGGAATGA 1353 42.79 MGYGPGLINLGQPNKYVETGSGDRGVQVSFQLGVVDPTSLLSIAEETLAEFSKPTGTAVEWVQMPGMKPGPDSIGNVAISHGCSGVAARACGLEPTRVAEVLKDGPLWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLTPARDFWLLRYTSVLEDGSLVESMTPFLVIIWLLSHDLTSLAFKNSVKSNFSPSENYIRKRILKIFKAINPVDNKKLILSHRYICGDLSLKKNVIVINSNSLPTILIQFYSSHLDGMDDVTILVNSSPDKLMGLNLSFANGFSAVGNAVLCAKASILLESVNVSFQFFQNVPPAILLRFLREHCSEWPGTGVGSFESQVILPLAHTIEHEEFLEVIKLEGVGHSPEEAREMFLLQVGVEFAFESHMQEHMASIARQYVRNIISSVQRVALASLPSFEFTSWSTPFTWTHGHCPYPTLLHNLSHGFCLE 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 794850 798502 - BLOR15042 Blo05g00080 60514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00080 450 PANTHER CLASS III HD-ZIP PROTEIN CNA1 257 378 - -
Blo05g00080 450 PANTHER CLASS III HD-ZIP PROTEIN CNA1 379 417 - -
Blo05g00080 450 PANTHER CLASS III HD-ZIP PROTEIN CNA1 32 163 - -
Blo05g00080 450 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 257 378 IPR044830 GO:0003700
Blo05g00080 450 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 379 417 IPR044830 GO:0003700
Blo05g00080 450 Pfam START domain 45 163 IPR002913 GO:0008289
Blo05g00080 450 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 32 163 IPR044830 GO:0003700
Blo05g00080 450 SUPERFAMILY Bet v1-like 44 225 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00080 Blo06g00707 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00080 Blo-Chr5:794850 Blo12g00752 Blo-Chr12:25868188 5.48E-08 dispersed
Blo05g00080 Blo-Chr5:794850 Blo06g00707 Blo-Chr6:30154632 2.18E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00080 K09338 - csv:101213106 374.4