Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00097 ATGGATTTCTGGCCAGAATTTCTCGCGAGCAGCTGGGGAAAAGAATTTGTGGCGGGTGGGTTCGGAGGCACTGCAGGCGTAATCTCAGGATATCCACTCGACACTCTACGCATCCGGCAACAGCACTCTAATTCCGCGTCAGCTTTCAGGATACTTCGCGATGTCGTCGCCGTCGAAGGACCTTCTGGCCTCTACAGAGGCATGGCTGCCCCTTTAGCCTCCGTCACTTTTCAGAATGCAATGGTTTTTCAGATCTATGCAATTCTTTCCAGAGTATTTGATTCATCTGTTTCTTTCAAAGAACCTCCTTCCTACAAAGGAGTAGCTTTAGGAGGTCTAGGCACCGGCGCTTTACAGAGCCTTTTGCTCACTCCGGTGGAATTAGTAAAGATTCGTCTGCAATTACAGAACACAAGATATGCAGCACTTCATCAATCAACCTCTCACACAGGCCCTGTGAGTGTAGCTAAAAGCATATACAGAACAGAGGGATTGAAAGGAATGTACAGAGGTCTAGCCATTACTATACTCAGAGATGCGCCGTCCCATGGCTTCTATTTCTGGACATACGAGTACGTCCGGGAGCTGCTTCATCCAGGTTGCAGGCAGAGTGGGCAAGAGAGCTTGAGGACGATGCTGACGGCCGGTGGATTCGCCGGAGTTGCTAGCTGGGTATGCTGTTATCCGCTCGATGTTGTGAAAACAAGGCTTCAAGCTCAATCCCAGCTAAACAAAAAATATGATGGGATTATTGACTGCTTTAGAAAAAGTGTTAGAGAGGATGGATATGGAGTTCTCTGGAGAGGATTAGGAACTGCAGTGGCGAGAGCTTTTCTGGTAAATGGAGCTGTTTTCTCTGCCTATGAAATAACTCTCAGATGCTTATTTGACAATGGAAGTAATCAGGATGAGCATCCATTGAAGAACAATTTGTAA 936 47.01 MDFWPEFLASSWGKEFVAGGFGGTAGVISGYPLDTLRIRQQHSNSASAFRILRDVVAVEGPSGLYRGMAAPLASVTFQNAMVFQIYAILSRVFDSSVSFKEPPSYKGVALGGLGTGALQSLLLTPVELVKIRLQLQNTRYAALHQSTSHTGPVSVAKSIYRTEGLKGMYRGLAITILRDAPSHGFYFWTYEYVRELLHPGCRQSGQESLRTMLTAGGFAGVASWVCCYPLDVVKTRLQAQSQLNKKYDGIIDCFRKSVREDGYGVLWRGLGTAVARAFLVNGAVFSAYEITLRCLFDNGSNQDEHPLKNNL 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 891000 892020 - BLOR15059 Blo05g00097 60531

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00097 311 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Blo05g00097 311 Gene3D Mitochondrial carrier domain 13 306 IPR023395 -
Blo05g00097 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Blo05g00097 311 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Blo05g00097 311 SUPERFAMILY Mitochondrial carrier 11 289 IPR023395 -
Blo05g00097 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 294 IPR018108 -
Blo05g00097 311 Pfam Mitochondrial carrier protein 11 93 IPR018108 -
Blo05g00097 311 Pfam Mitochondrial carrier protein 211 298 IPR018108 -
Blo05g00097 311 Pfam Mitochondrial carrier protein 110 198 IPR018108 -
Blo05g00097 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 196 IPR018108 -
Blo05g00097 311 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Blo05g00097 311 PRINTS Mitochondrial carrier protein signature 169 187 IPR002067 GO:0055085
Blo05g00097 311 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Blo05g00097 311 PRINTS Mitochondrial carrier protein signature 216 238 IPR002067 GO:0055085
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00097 K15109 SLC25A20_29, CACT, CACL, CRC1; solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29 - tcc:18595924 484.952
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00995 Blo-Chr2:38567728 Blo05g00097 Blo-Chr5:891000 4.89E-51 dispersed
Blo05g00097 Blo-Chr5:891000 Blo14g00400 Blo-Chr14:4388114 3.39E-07 dispersed
Blo05g00097 Blo-Chr5:891000 Blo03g00125 Blo-Chr3:3701516 9.12E-52 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi9g366 Blo05g00097 . . . Bpe06g00730 . . . Cmo08g00656 Cmo17g00772 Cma01g00111 Cma14g01309 Car01g00097 Car14g01160 . Cpe12g00690 Cpe17g00563 Bhi01g03422 . . . . . . Cla07g01247 Cam07g1258 Cec07g1425 Cco07g1383 Clacu07g1308 Cmu07g1284 Cre07g1665 Cone20ag1234 Cone17ag0178 . . Lsi02g02791 Csa07g02237 . Cme01g02686 . . . . . . . . Sed06g2154 Cmo01g00116 Cmo14g01344 Cma08g00693 Cma17g00803 Car08g00582 Car17g00746 Cpe02g01678 Cpe03g01111 Bhi09g00146 Tan06g0306 Cmetu04g3033 . Hepe03g1558 . . Cla09g00190 Cam09g0207 Cec09g0212 Cco09g0206 Clacu09g0209 . Cre09g0198 Lsi07g00504 Csa03g02399 Chy01g02068 Cme04g01097
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo08g00215 . 1 406 Antiporters AT5G46110 76.9 4.4e-171 597.8
Blo14g00408 . 1 404 Antiporters AT5G46110 76.8 1.2e-168 589.7
Blo03g01442 BCT,ECH 1 396 Antiporters AT5G54800 76.6 2.2e-164 575.5
Blo03g00576 BCT,ECH 1 399 Antiporters AT5G54800 74.1 4.0e-158 554.7
Blo01g00150 . 60 415 Antiporters AT5G54800 50.3 9.7e-88 320.9
Blo11g00659 . 71 410 Antiporters AT3G01550 66.6 2.0e-122 436.0
Blo13g00127 . 55 444 Antiporters AT3G01550 55.1 6.3e-108 387.9
Blo16g00227 . 52 440 Antiporters AT3G01550 54.7 3.8e-105 378.6
Blo15g00265 . 53 377 Antiporters AT3G01550 51.4 4.7e-95 345.1
Blo13g00127 . 1 446 Antiporters AT5G33320 64.3 9.7e-147 516.9
Blo16g00227 . 1 443 Antiporters AT5G33320 64.7 4.8e-146 514.6
Blo15g00265 . 3 379 Antiporters AT5G33320 59.6 2.0e-123 439.5
Blo11g00659 . 75 412 Antiporters AT5G33320 62.4 5.7e-115 411.4
Blo03g01442 BCT,ECH 10 394 Antiporters AT1G61800 74.7 2.2e-159 558.9
Blo03g00576 BCT,ECH 10 397 Antiporters AT1G61800 71.9 2.6e-152 535.4
Blo01g00150 . 120 416 Antiporters AT1G61800 54.5 2.3e-87 319.7
Blo01g00150 . 22 427 Antiporters AT5G17630 68.0 1.6e-149 526.2
Blo03g01442 BCT,ECH 87 393 Antiporters AT5G17630 55.2 5.9e-91 331.6
Blo03g00576 BCT,ECH 84 406 Antiporters AT5G17630 52.8 1.3e-90 330.5
Blo15g00403 . 37 432 Antiporters AT3G13320 74.2 1.8e-159 559.3
Blo05g00015 . 60 428 Antiporters AT3G13320 75.5 7.5e-153 537.3
Blo02g00170 BCT 77 421 Antiporters AT3G13320 75.9 8.6e-141 497.3
Blo03g00483 . 108 447 Antiporters AT3G13320 73.5 4.0e-130 461.8
Blo01g01049 . 12 427 Antiporters AT2G38170 72.5 7.0e-165 577.4
Blo01g01049 . 10 398 Antiporters AT3G51860 73.8 1.6e-153 539.7
Blo01g01049 . 10 427 Antiporters AT5G01490 59.3 4.0e-133 471.9
Blo15g00403 . 52 427 Antiporters AT1G55720 74.0 2.3e-149 525.8
Blo05g00015 . 52 431 Antiporters AT1G55720 69.8 8.4e-144 507.3
Blo02g00170 BCT 77 422 Antiporters AT1G55720 72.8 1.0e-133 473.8
Blo03g00483 . 107 447 Antiporters AT1G55720 71.3 2.7e-126 449.1
Blo15g00403 . 55 427 Antiporters AT1G55730 78.0 1.5e-161 566.2
Blo05g00015 . 60 432 Antiporters AT1G55730 73.7 2.6e-153 538.9
Blo02g00170 BCT 77 421 Antiporters AT1G55730 76.5 1.2e-142 503.4
Blo03g00483 . 107 447 Antiporters AT1G55730 74.6 1.2e-134 476.9
Blo01g01049 . 65 429 Antiporters AT1G55730 51.2 1.6e-94 343.6
Blo18g00584 . 14 546 Antiporters AT5G27150 78.8 6.2e-242 833.6
Blo01g00088 . 6 519 Antiporters AT5G27150 71.1 3.4e-208 721.5
Blo05g00328 . 37 553 Antiporters AT5G27150 64.9 4.8e-186 647.9
Blo17g00606 . 9 657 Antiporters AT5G27150 56.6 1.1e-185 646.7
Blo18g00601 . 14 530 Antiporters AT5G27150 64.2 2.4e-185 645.6
Blo18g00584 . 15 547 Antiporters AT3G06370 71.7 1.7e-210 729.2
Blo01g00088 . 6 525 Antiporters AT3G06370 72.5 4.6e-208 721.1
Blo05g00328 . 41 552 Antiporters AT3G06370 63.5 3.7e-181 631.7
Blo18g00601 . 17 529 Antiporters AT3G06370 59.3 2.1e-168 589.3
Blo17g00606 . 9 661 Antiporters AT3G06370 53.0 7.4e-166 580.9
Blo18g00584 . 28 531 Antiporters AT5G55470 59.4 4.7e-170 594.7
Blo01g00088 . 3 506 Antiporters AT5G55470 57.7 3.3e-163 572.0
Blo18g00601 . 19 518 Antiporters AT5G55470 56.3 8.7e-156 547.4
Blo05g00328 . 23 539 Antiporters AT5G55470 54.3 6.2e-154 541.2
Blo18g00584 . 20 547 Antiporters AT3G05030 81.8 1.5e-248 855.5
Blo01g00088 . 6 519 Antiporters AT3G05030 73.0 1.6e-213 739.2
Blo17g00606 . 10 659 Antiporters AT3G05030 58.4 1.8e-193 672.5
Blo05g00328 . 37 553 Antiporters AT3G05030 65.1 1.6e-192 669.5
Blo18g00601 . 17 530 Antiporters AT3G05030 63.4 1.2e-184 643.3
Blo17g00026 BCT 99 680 Antiporters AT1G15460 65.9 2.5e-217 751.9
Blo16g00228 . 94 633 Antiporters AT1G15460 57.6 7.2e-180 627.5
Blo04g00732 . 102 644 Antiporters AT1G15460 56.7 9.1e-175 610.5
Blo10g00091 . 177 711 Antiporters AT1G15460 57.0 8.0e-171 597.4
Blo12g00379 . 117 671 Antiporters AT1G15460 55.2 1.4e-170 596.7
Blo10g00091 . 78 754 Antiporters AT3G06450 70.0 3.2e-281 964.5
Blo04g00732 . 3 651 Antiporters AT3G06450 71.9 8.0e-277 949.9
Blo12g00379 . 51 673 Antiporters AT3G06450 74.2 4.6e-272 934.1
Blo16g00228 . 55 640 Antiporters AT3G06450 72.1 7.1e-249 857.1
Blo17g00026 BCT 4 666 Antiporters AT3G06450 54.6 1.2e-211 733.4
Blo10g00091 . 76 765 Antiporters AT2G47160 77.9 0.0e+00 1100.5
Blo04g00732 . 1 703 Antiporters AT2G47160 72.3 2.5e-302 1034.6
Blo12g00379 . 51 699 Antiporters AT2G47160 73.3 5.9e-288 986.9
Blo16g00228 . 55 672 Antiporters AT2G47160 76.3 4.0e-276 947.6
Blo17g00026 BCT 4 666 Antiporters AT2G47160 54.9 3.4e-211 731.9
Blo17g00026 BCT 4 680 Antiporters AT1G74810 67.1 2.7e-258 888.3
Blo04g00732 . 7 644 Antiporters AT1G74810 57.8 5.3e-214 741.1
Blo10g00091 . 82 711 Antiporters AT1G74810 57.1 1.3e-209 726.5
Blo12g00379 . 51 668 Antiporters AT1G74810 55.8 2.2e-196 682.6
Blo16g00228 . 55 633 Antiporters AT1G74810 56.8 4.8e-191 664.8
Blo10g00091 . 76 763 Antiporters AT3G62270 80.1 0.0e+00 1104.4
Blo04g00732 . 1 694 Antiporters AT3G62270 76.0 8.5e-308 1052.7
Blo12g00379 . 51 695 Antiporters AT3G62270 76.6 3.3e-288 987.6
Blo16g00228 . 49 674 Antiporters AT3G62270 75.4 3.1e-278 954.5
Blo17g00026 BCT 4 710 Antiporters AT3G62270 54.4 6.9e-217 750.7
Blo17g00026 BCT 4 676 Antiporters AT4G32510 69.7 1.9e-272 935.3
Blo04g00732 . 1 650 Antiporters AT4G32510 53.7 5.4e-203 704.5
Blo10g00091 . 76 712 Antiporters AT4G32510 54.4 7.8e-202 700.7
Blo12g00379 . 49 653 Antiporters AT4G32510 54.8 5.6e-192 667.9
Blo16g00228 . 55 633 Antiporters AT4G32510 52.9 3.4e-181 632.1
Blo17g00026 BCT 4 674 Antiporters AT5G25430 67.4 1.0e-257 886.3
Blo10g00091 . 82 711 Antiporters AT5G25430 55.8 2.0e-202 702.6
Blo04g00732 . 7 609 Antiporters AT5G25430 55.7 2.2e-196 682.6
Blo12g00379 . 51 672 Antiporters AT5G25430 52.4 2.5e-184 642.5
Blo16g00228 . 40 633 Antiporters AT5G25430 52.5 1.1e-176 617.1
Blo11g00954 . 1 1156 Antiporters AT2G01980 58.7 0.0e+00 1206.4
Blo11g00954 . 21 759 Antiporters AT1G14660 59.0 2.0e-243 839.0
Blo18g00286 . 15 579 Antiporters AT5G11800 77.9 9.0e-234 806.6
Blo01g01470 . 44 619 Antiporters AT5G11800 75.6 6.6e-229 790.4
Blo08g00337 . 45 709 Antiporters AT5G11800 63.3 4.6e-206 714.5
Blo15g00147 . 41 566 Antiporters AT5G11800 70.6 5.3e-194 674.5
Blo17g00290 . 58 384 Antiporters AT5G11800 75.6 8.4e-123 438.0
Blo17g00291 . 58 242 Antiporters AT5G11800 87.0 2.8e-86 316.6
Blo15g00147 . 24 557 Antiporters AT5G51710 82.6 6.1e-240 827.0
Blo18g00286 . 17 550 Antiporters AT5G51710 66.3 9.8e-182 633.6
Blo01g01470 . 19 598 Antiporters AT5G51710 62.5 8.3e-181 630.6
Blo08g00337 . 23 681 Antiporters AT5G51710 53.7 8.9e-167 583.9
Blo17g00290 . 55 385 Antiporters AT5G51710 60.8 1.8e-95 347.1
Blo17g00291 . 59 240 Antiporters AT5G51710 78.0 1.7e-72 270.8
Blo18g00286 . 2 579 Antiporters AT2G19600 75.8 1.1e-228 789.6
Blo01g01470 . 35 615 Antiporters AT2G19600 74.1 4.6e-222 767.7
Blo08g00337 . 6 706 Antiporters AT2G19600 63.5 1.4e-215 746.1
Blo15g00147 . 40 554 Antiporters AT2G19600 71.7 2.1e-187 652.5
Blo17g00290 . 48 384 Antiporters AT2G19600 71.7 5.6e-119 425.2
Blo17g00291 . 58 242 Antiporters AT2G19600 87.6 2.0e-84 310.5
Blo15g00756 . 176 594 Antiporters AT1G49810 72.9 3.8e-170 594.7
Blo02g00839 . 147 514 Antiporters AT1G49810 59.1 2.3e-127 452.6
Blo15g00756 . 118 609 Antiporters AT3G19490 81.5 2.1e-227 785.4
Blo02g00839 . 1 530 Antiporters AT3G19490 64.3 4.1e-191 664.8
Blo03g00976 . 390 860 Antiporters AT5G12860 91.9 2.9e-250 861.3
Blo04g01395 . 108 578 Antiporters AT5G12860 50.7 7.8e-131 464.5
Blo03g00977 . 3 236 Antiporters AT5G12860 85.9 8.7e-106 381.3
Blo04g01395 . 109 579 Antiporters AT5G64280 72.8 5.8e-203 704.1
Blo03g00008 . 128 613 Antiporters AT5G64280 62.8 1.0e-175 613.6
Blo04g01395 . 108 579 Antiporters AT5G64290 82.4 6.9e-220 760.4
Blo03g00008 . 127 613 Antiporters AT5G64290 70.0 9.8e-190 660.2
Blo13g00360 . 146 522 Antiporters AT4G28390 81.0 6.0e-175 610.5
Blo07g00643 . 169 552 Antiporters AT4G28390 75.3 1.3e-161 566.2
Blo06g00605 . 2 390 Antiporters AT4G28390 75.3 1.4e-160 562.8
Blo05g00204 . 75 462 Antiporters AT4G28390 73.1 6.0e-159 557.4
Blo10g00123 . 333 718 Antiporters AT4G28390 71.7 4.9e-153 537.7
Blo16g00162 . 5 298 Antiporters AT4G28390 61.7 3.5e-106 382.1
Blo06g00605 . 1 391 Antiporters AT3G08580 79.4 2.1e-172 602.1
Blo07g00643 . 168 553 Antiporters AT3G08580 77.9 4.6e-167 584.3
Blo05g00204 . 74 463 Antiporters AT3G08580 75.1 6.9e-163 570.5
Blo10g00123 . 332 719 Antiporters AT3G08580 70.8 2.7e-151 531.9
Blo13g00360 . 144 521 Antiporters AT3G08580 70.5 1.1e-149 526.6
Blo16g00162 . 7 298 Antiporters AT3G08580 57.7 6.6e-97 351.3
Blo06g00605 . 1 391 Antiporters AT5G13490 82.0 2.6e-181 631.7
Blo07g00643 . 168 553 Antiporters AT5G13490 81.2 1.1e-179 626.3
Blo05g00204 . 74 463 Antiporters AT5G13490 78.1 1.1e-173 606.3
Blo13g00360 . 144 521 Antiporters AT5G13490 75.3 5.9e-162 567.4
Blo10g00123 . 332 719 Antiporters AT5G13490 73.9 1.1e-160 563.1
Blo16g00162 . 8 298 Antiporters AT5G13490 62.7 1.0e-105 380.6
Blo16g00162 . 4 300 Antiporters AT5G17400 77.4 9.2e-134 473.4
Blo13g00360 . 220 513 Antiporters AT5G17400 63.6 2.4e-110 395.6
Blo06g00605 . 87 382 Antiporters AT5G17400 62.8 1.0e-108 390.2
Blo07g00643 . 249 539 Antiporters AT5G17400 62.5 5.1e-108 387.9
Blo05g00204 . 159 449 Antiporters AT5G17400 62.5 1.9e-107 386.0
Blo10g00123 . 415 705 Antiporters AT5G17400 59.1 4.9e-103 371.3
Blo17g00633 . 4 575 Antiporters AT1G08960 64.9 8.6e-191 663.7
Blo10g00079 . 167 662 Antiporters AT2G47600 70.0 1.2e-197 686.4
Blo05g00097 . 1 303 Antiporters AT1G79900 73.4 4.3e-128 454.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002141 0 2 1 0 1 2 4 2 2 2 2 2 4 2 2 3 2 3 4 2 2 2 2 2 2 2 2 4 3 1 64
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo05g00097 Blo_Chr05 FPKM 0.0 5.311162 4.739111 0.0 0.0 0.0 11.018646 0.0 0.0 4.880195