Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00097 ATGGATTTCTGGCCAGAATTTCTCGCGAGCAGCTGGGGAAAAGAATTTGTGGCGGGTGGGTTCGGAGGCACTGCAGGCGTAATCTCAGGATATCCACTCGACACTCTACGCATCCGGCAACAGCACTCTAATTCCGCGTCAGCTTTCAGGATACTTCGCGATGTCGTCGCCGTCGAAGGACCTTCTGGCCTCTACAGAGGCATGGCTGCCCCTTTAGCCTCCGTCACTTTTCAGAATGCAATGGTTTTTCAGATCTATGCAATTCTTTCCAGAGTATTTGATTCATCTGTTTCTTTCAAAGAACCTCCTTCCTACAAAGGAGTAGCTTTAGGAGGTCTAGGCACCGGCGCTTTACAGAGCCTTTTGCTCACTCCGGTGGAATTAGTAAAGATTCGTCTGCAATTACAGAACACAAGATATGCAGCACTTCATCAATCAACCTCTCACACAGGCCCTGTGAGTGTAGCTAAAAGCATATACAGAACAGAGGGATTGAAAGGAATGTACAGAGGTCTAGCCATTACTATACTCAGAGATGCGCCGTCCCATGGCTTCTATTTCTGGACATACGAGTACGTCCGGGAGCTGCTTCATCCAGGTTGCAGGCAGAGTGGGCAAGAGAGCTTGAGGACGATGCTGACGGCCGGTGGATTCGCCGGAGTTGCTAGCTGGGTATGCTGTTATCCGCTCGATGTTGTGAAAACAAGGCTTCAAGCTCAATCCCAGCTAAACAAAAAATATGATGGGATTATTGACTGCTTTAGAAAAAGTGTTAGAGAGGATGGATATGGAGTTCTCTGGAGAGGATTAGGAACTGCAGTGGCGAGAGCTTTTCTGGTAAATGGAGCTGTTTTCTCTGCCTATGAAATAACTCTCAGATGCTTATTTGACAATGGAAGTAATCAGGATGAGCATCCATTGAAGAACAATTTGTAA 936 47.01 MDFWPEFLASSWGKEFVAGGFGGTAGVISGYPLDTLRIRQQHSNSASAFRILRDVVAVEGPSGLYRGMAAPLASVTFQNAMVFQIYAILSRVFDSSVSFKEPPSYKGVALGGLGTGALQSLLLTPVELVKIRLQLQNTRYAALHQSTSHTGPVSVAKSIYRTEGLKGMYRGLAITILRDAPSHGFYFWTYEYVRELLHPGCRQSGQESLRTMLTAGGFAGVASWVCCYPLDVVKTRLQAQSQLNKKYDGIIDCFRKSVREDGYGVLWRGLGTAVARAFLVNGAVFSAYEITLRCLFDNGSNQDEHPLKNNL 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 891000 892020 - BLOR15059 Blo05g00097 60531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00097 311 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Blo05g00097 311 Gene3D Mitochondrial carrier domain 13 306 IPR023395 -
Blo05g00097 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Blo05g00097 311 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Blo05g00097 311 SUPERFAMILY Mitochondrial carrier 11 289 IPR023395 -
Blo05g00097 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 294 IPR018108 -
Blo05g00097 311 Pfam Mitochondrial carrier protein 11 93 IPR018108 -
Blo05g00097 311 Pfam Mitochondrial carrier protein 211 298 IPR018108 -
Blo05g00097 311 Pfam Mitochondrial carrier protein 110 198 IPR018108 -
Blo05g00097 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 196 IPR018108 -
Blo05g00097 311 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Blo05g00097 311 PRINTS Mitochondrial carrier protein signature 169 187 IPR002067 GO:0055085
Blo05g00097 311 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Blo05g00097 311 PRINTS Mitochondrial carrier protein signature 216 238 IPR002067 GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00995 Blo-Chr2:38567728 Blo05g00097 Blo-Chr5:891000 4.89E-51 dispersed
Blo05g00097 Blo-Chr5:891000 Blo14g00400 Blo-Chr14:4388114 3.39E-07 dispersed
Blo05g00097 Blo-Chr5:891000 Blo03g00125 Blo-Chr3:3701516 9.12E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00097 K15109 - tcc:18595924 484.952