Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00111 ATGAAAAGTGAAGAAAATTTGATTACTCGTATTGTTAAAGAGCCTTCTGGTAGAATAACTCGTGCTCGAGCTGCTGCCCTTCATAAAGCTACTCAGTTGCCTTTGAAAGGGAAGACAGATGAGAATCAGATGCGGCCTTTGCAAACGGCACCGAAAAAAGCTGCGTGTGATGATGGCAGGTGTCTGCAGCATAAAAGGAGAGTAGTTCTTCAGGATGTCACCAATATTTTCTGCGAACCATCGTATCGGAAATGCTTCACTGCATCTAAAATCGAGGCTAAGAATTGTAAACTAAGCAATAAACATCCGAAAAAGGATTCCAAAGCTGTCCCAGTAGGTGGTTCGAAAAAGCACGAATTTCAATTCGATCCTAAAATACAGAGAGCACAAAAGAAAGTTAAAACAAACTCTCACTTACAAGAACTTGATTATTCGAGTAATTCGATAGACCAAGAGTTGCCTTCTCAATTAGACATGATAAAGAGGTGTACCGATGGTGGTCAGCTCGAAATTTGTACTTCTCAAAGTCCTTTGAAATTACTGAGTAATGAAGGGAAAGGTATGCCCTTTTTTCTTGCTGGGAGAGCAAATCTTAGGACAATATCATGCCACCCAGACATTTTAGATATTGATTCTGACAATAGTGATCCTCGAATGTGCAGCCTCTATGCCCCTGATATCTATCACAATTTACTTGCTGCCGAGCTTGTTAGAAGGCCACATTCTGATTTCATGGTGACAATCCAACAAGATATTACTCAAAGCATGCGCAATATTTTGGTTGATTGGCTTGTGGAGGTATGTGAAGAGTACAAGTTAGTACCAGATACACTTTTCCTAACTGTTCACATGGTTGATTGGTTTCTATCTCGAAATTACATCGAAAGACAACAACTTCAACTGTTGGGTATAACTTGTATGCTTATTGCTTCGAAGTATGAAGAAATTTGTGCGCCACGGGTCGAAGAGTTTTGCTTCATCACTGATAACACCTACACAAAATCTGAGGTGTTGAGAATGGAAGGTCAGGTATTAAAGTTTTTTGGCTTTCAACTTTCTGTACCAACCACAAAAACATTTCTTAGGTACTTGTACTTTAGCTTTCATCACATGTTTAAATGGAGATTCCTTCGAGCTGCACAAGCCTTGCATAAGATGCCAAGTTATGAGCTGGAGTTCTTGGCCGATTATCTAGCAGAATTATCGTTAATGGACTGCAGTTTCTCGAATTTCCTTCCTTCGATTATTGCTGCCTCGGCTTTGTTTCTTTCCAAATGGACATTAGATCAGAAAAGCCATCCATGGAATCTGACATTAGAGCATTATACATCTTACAAGGCCTCAGACTTGAGGGTCACCGTTTTCGCCTTGCAAGATCTACAATTGAACACCAAAGGCTGTCTTTTAAGTGCTGTTCGATCCAAGTATCGGCAAGAACGGTTTAAGACGGTTGCGGCCTTGTCTTCGCCAAAACTGCTCGAAACTCTGTTTTGA 1494 40.5 MKSEENLITRIVKEPSGRITRARAAALHKATQLPLKGKTDENQMRPLQTAPKKAACDDGRCLQHKRRVVLQDVTNIFCEPSYRKCFTASKIEAKNCKLSNKHPKKDSKAVPVGGSKKHEFQFDPKIQRAQKKVKTNSHLQELDYSSNSIDQELPSQLDMIKRCTDGGQLEICTSQSPLKLLSNEGKGMPFFLAGRANLRTISCHPDILDIDSDNSDPRMCSLYAPDIYHNLLAAELVRRPHSDFMVTIQQDITQSMRNILVDWLVEVCEEYKLVPDTLFLTVHMVDWFLSRNYIERQQLQLLGITCMLIASKYEEICAPRVEEFCFITDNTYTKSEVLRMEGQVLKFFGFQLSVPTTKTFLRYLYFSFHHMFKWRFLRAAQALHKMPSYELEFLADYLAELSLMDCSFSNFLPSIIAASALFLSKWTLDQKSHPWNLTLEHYTSYKASDLRVTVFALQDLQLNTKGCLLSAVRSKYRQERFKTVAALSSPKLLETLF 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1047779 1051716 + BLOR15073 Blo05g00111 60545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00111 497 SUPERFAMILY Cyclin-like 215 352 IPR036915 -
Blo05g00111 497 PANTHER CYCLINS 46 497 IPR039361 -
Blo05g00111 497 SUPERFAMILY Cyclin-like 370 492 IPR036915 -
Blo05g00111 497 PIRSF Cyclin_A_B_D_E 14 496 IPR039361 -
Blo05g00111 497 Pfam Cyclin, N-terminal domain 226 352 IPR006671 -
Blo05g00111 497 PANTHER CYCLIN-A2-4 46 497 - -
Blo05g00111 497 SMART cyclin_7 375 459 IPR013763 -
Blo05g00111 497 SMART cyclin_7 262 346 IPR013763 -
Blo05g00111 497 MobiDBLite consensus disorder prediction 100 122 - -
Blo05g00111 497 SMART Cyclin_C_2 355 490 IPR004367 -
Blo05g00111 497 Gene3D - 226 486 - -
Blo05g00111 497 CDD CYCLIN 378 445 IPR013763 -
Blo05g00111 497 CDD CYCLIN 256 341 IPR013763 -
Blo05g00111 497 Gene3D - 240 353 - -
Blo05g00111 497 Pfam Cyclin, C-terminal domain 355 489 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01366 Blo-Chr1:51846880 Blo05g00111 Blo-Chr5:1047779 1.14E-32 dispersed
Blo01g01368 Blo-Chr1:51874898 Blo05g00111 Blo-Chr5:1047779 9.32E-21 dispersed
Blo05g00111 Blo-Chr5:1047779 Blo05g00857 Blo-Chr5:31001401 7.41E-97 dispersed
Blo05g00111 Blo-Chr5:1047779 Blo12g01089 Blo-Chr12:28551756 7.48E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00111 K06627 - pvy:116118139 518.079