Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00153 ATGGCCAGACCTCAGCAGAAATTCCGAGGAGTCCGCCAACGTCACTGGGGCTCTTGGGTCTCCGAAATCCGTCACCCTCTACTGAAGACGAGAATTTGGCTAGGAACGTTCGAAACGGCTGAGGACGCGGCGAGAGCTTACGACGAAGCGGCGAGGCTAATGTGCGGGCCGAAAGCTCGAACCAATTTCTCGTACAATCCGAACGAGCAACAGTCGTCTTCCTCAAAGCTTCTGTCTGCAACTCTAACTTCAAAGCTTCAAAAATGCTACATGACCTCCCTTCAAATGGCCAAAAAACAACCCCCCAAACAGCCTCCACAAACCCACTACTCGTGCGCCTCAACTCCGAGCTGCATTCCCCACAATAGCCCCGGAACGCACATTCAGATTCAGCCGCCGGAGAAGTCGTGGATGGAAGCCGGCCAGCAGTTCCAGCATCTTAAAGATGATGATATCGAGCAGATGATCCAGGAACTGCTTGATCTTGGATCGTTTGAGCTTCGATCTGTCGTTTCTTCTTAA 522 52.11 MARPQQKFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFSYNPNEQQSSSSKLLSATLTSKLQKCYMTSLQMAKKQPPKQPPQTHYSCASTPSCIPHNSPGTHIQIQPPEKSWMEAGQQFQHLKDDDIEQMIQELLDLGSFELRSVVSS 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1400731 1401365 - BLOR15115 Blo05g00153 60587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00153 173 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 169 - -
Blo05g00153 173 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Blo05g00153 173 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Blo05g00153 173 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Blo05g00153 173 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Blo05g00153 173 PANTHER ETHYLENE RESPONSE FACTOR 1 169 - -
Blo05g00153 173 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Blo05g00153 173 CDD AP2 6 63 IPR001471 GO:0003700|GO:0006355
Blo05g00153 173 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Blo05g00153 173 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00153 Blo-Chr5:1400731 Blo10g00571 Blo-Chr10:16821112 1.43E-29 dispersed
Blo18g00015 Blo-Chr18:147452 Blo05g00153 Blo-Chr5:1400731 3.92E-33 transposed
Blo10g00517 Blo-Chr10:12050628 Blo05g00153 Blo-Chr5:1400731 2.80E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12375 PF00847 AP2 1.10E-11 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00153 - - cit:102619724 206.453