Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00159 ATGGAAAATAGAAATACAGTTTGCTCGTTCTTGAATGCGTCAATGGCGCAAGCCGGTGGGGGGCTGTATAAGAAGAGCAAATCCTTCGTCTTCGACGATAAAGAGGCTTTTCTCAGATACCCATTTTCTCTAATTCAGATGGCCGTCACTGATTCTACTTCTGGGCAGCCGCAATTCATAGCAAGCACTGGAAACAGAAGCTTTTCTAATGAGAACTCAGAATCTGATCATATTGTTGTTCCTGATGTGACCACACTCTACTCCGGTCGCGTTTCAGTCGGATATGCCTCAGGCTCCACGGGGAAGGCCTCCTCTGCTCCCGATACTATTATTTCATTTCCTACACCACAAAGGAAAAGCTGGAGAAATCTATTTGCATACATGGGTCCTGGATTTCTTATTTCAATTGCATATATTGACCCCGGAAATTTCGAAACGGATTTACAGTCGGGAGCACAATACAAATACGAGCTACTTTGGATCATACTAGTGTCTTCATGTGCTGCTCTTGTTATTCAGTCCTTGGCTGCCAATCTTGGAGTTGTCACAGGAAAGCATTTAGCAGAGCATTGCCGAACTGAATATTCTAGGGTTCCCAACTTCATTCTATGGGTGCTGGCTGAAATTTCGATAGTTGCATGCGACATTCCCGAGGTCATAGGAACGGCTTTTGCTTTGAACATGCTCTTCAAAATTCCCATTTGGATCGGCGTTCTTCTGACCGGATTGAGCACATTGATGCTTCTAGCATTACAACAATATGGGGTTAGGAAGCTCGAATTCTTGATAGCTTTTCTTGTACTTACGATTGCTGTGTGCTTCTTGATGGAGCTCGGCTATGCTAAGCCAGTTGCTTCGGAAGTTCTTCACGGGCTTTTTGTCCCTCAACTCAAAGGAAATGGCGCTACCGGTCTTGCCATTTCTCTTCTCGGGGCTATGGTTATGCCGCACAATCTCTTCCTTCACTCGGCCTTGGTTCTATCCCGGAATATTCCACGATCCGTTCGGGGAATTGAGGAAGCTTGTAGATTTTACTTGATAGAGAGCGCCTTTGCTCTCACGATCGCCTTCCTCATAAATGTGTCAGTCATTTCCGTAAGTGGTGCGATTTGCAATTCACCGGACTTAAACGCAGAAGACAAGATGAGCTGCAAAGACTTGGACTTGAACTCAGCCTCCTTCTTGCTTAGAAATGTGTTGGGTAGTTGGAGTTCGAAGCTTTTCGCAATTGCTTTGTTAGCATCTGGCCAGAGTTCTACCATTACTGGCACTTATGCAGGGCAGTATGTTATGCAGGGATTTCTCAATTTACGACTGAAGCCATGGCTGCGGAACTTTCTGACTCGATGTTTGGCAATCGTGCCTAGTTTGATTGTTGCTGTCATTGGCGGCTCCGCCGGAGCTGGGAGGCTAATCATCATCGCATCGATGATTTTGTCATTTGAACTACCCTTCGCTCTTGTTCCTCTTCTCAAATTCACCAGCAGCAAGAGCAAGATGGGGGCGTATGCCAATTCGACTGCAGTTTCAGTTGTCTCCTGGATAGTTGGTTTCCTGATCATGTCCATTAATATATACTATCTCATATCAGGCTTTCTGAGTCTTCTTCTTCACAGCCATTTAGGCATCGCGGCCGTTGTGTTCATTGGGATTGTGGGATTCTCTGCCATTGCTGTCTATTTGGCCGGAATCTCATATCTGGTTTTACGAAAAAACAAAGAAGCTACTAATTTTCTTGCCTTGACTATGCCGGAAAGTCAGGAAGCTGCTGCCGGAACCGGCAATGGAACAACACATTGCCTCCCCGGAGATGATATAGTCTCCATGCAATTGCCTCAGAAAAGCAGTACAGGAGAACAATGTCATTCCCACTTAGATTCTGAACTAGTTTAG 1893 45.43 MENRNTVCSFLNASMAQAGGGLYKKSKSFVFDDKEAFLRYPFSLIQMAVTDSTSGQPQFIASTGNRSFSNENSESDHIVVPDVTTLYSGRVSVGYASGSTGKASSAPDTIISFPTPQRKSWRNLFAYMGPGFLISIAYIDPGNFETDLQSGAQYKYELLWIILVSSCAALVIQSLAANLGVVTGKHLAEHCRTEYSRVPNFILWVLAEISIVACDIPEVIGTAFALNMLFKIPIWIGVLLTGLSTLMLLALQQYGVRKLEFLIAFLVLTIAVCFLMELGYAKPVASEVLHGLFVPQLKGNGATGLAISLLGAMVMPHNLFLHSALVLSRNIPRSVRGIEEACRFYLIESAFALTIAFLINVSVISVSGAICNSPDLNAEDKMSCKDLDLNSASFLLRNVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLNLRLKPWLRNFLTRCLAIVPSLIVAVIGGSAGAGRLIIIASMILSFELPFALVPLLKFTSSKSKMGAYANSTAVSVVSWIVGFLIMSINIYYLISGFLSLLLHSHLGIAAVVFIGIVGFSAIAVYLAGISYLVLRKNKEATNFLALTMPESQEAAAGTGNGTTHCLPGDDIVSMQLPQKSSTGEQCHSHLDSELV 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1436798 1447367 - BLOR15121 Blo05g00159 60593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00159 630 Hamap Divalent metal cation transporter MntH [mntH]. 107 532 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 122 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 100 618 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 Pfam Natural resistance-associated macrophage protein 144 506 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 PRINTS Natural resistance-associated macrophage protein signature 306 329 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 PRINTS Natural resistance-associated macrophage protein signature 444 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 PRINTS Natural resistance-associated macrophage protein signature 203 229 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 PRINTS Natural resistance-associated macrophage protein signature 416 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 PRINTS Natural resistance-associated macrophage protein signature 476 495 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 PRINTS Natural resistance-associated macrophage protein signature 256 277 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 PRINTS Natural resistance-associated macrophage protein signature 231 250 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo05g00159 630 PANTHER METAL TRANSPORTER NRAMP1 100 618 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01303 Blo-Chr1:49945022 Blo05g00159 Blo-Chr5:1436798 1.94E-125 dispersed
Blo04g01073 Blo-Chr4:15606691 Blo05g00159 Blo-Chr5:1436798 2.55E-107 dispersed
Blo05g00159 Blo-Chr5:1436798 Blo16g00314 Blo-Chr16:7964685 2.44E-175 dispersed
Blo02g00612 Blo-Chr2:12391471 Blo05g00159 Blo-Chr5:1436798 1.37E-07 transposed
Blo07g01398 Blo-Chr7:34050954 Blo05g00159 Blo-Chr5:1436798 8.81E-36 transposed
Blo05g00159 Blo-Chr5:1436798 Blo06g00647 Blo-Chr6:29455010 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00159 K21398 - gmx:100797298 822.387