Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo05g00182 | ATGGAGCTTGGGCTGAGCTTGGGAGATGCGTCCAAGTCATTTGGATTTGTTGAAAAATCTCGAAACCAAAGAGTTTCGGCCAAAGATTTAGGCTTTTGCGCTGGTTTATCCATTGGATCGACGGCTTTCGCCGGAGGGAAGGACGCAGAGGGAGATGGGGAAGAAGAAGAAGAAGAAGAAAATGGACAGCGGGAGGGAAATCAATTTTACAGAGAAGAGGATGAGGCTCGATTTGTTTCTTATGATGGACCAGTCCAACTCGACCTTCTTCCTCACACTCCTGTTCCTCGAAATCTTCCAAGTTCTATCCATGGCTTCCATTTGCCGGCGTCGGAAGACGGTAGCTCGGAAGCGGGTTCTTCAGCAAGAGGCCTCGACGTGAATCAAATACCTTCGACGGAGGCAGACGACGGAGACGCATCGCCGACGTACAATGCGGCGATGTCGTTTCCGATGTACATGGGTGGAGGAGACGGCGCCGGAAATGAAATGGGAGAGGCTGACAGAGTTTCCAGAGCAAGTGACGACGATGATAATGGCCCCGGCAGGAAAAAACTCAGACTTTCAAAAGAACAATCTGCCTTCTTAGAAGAAAGCTTCAAAGAACACAACACATTAAACCCAAAGCAAAAGCTTGCTCTAGCGAATCAGCTCAATCTCCGACCTCGACAAGTAGAAGTCTGGTTTCAAAATCGGAGAGCAAGGACGAAATTGAAGCAAACGGAGGTGGATTGCGAGTACTTGAAGAGATGCTGCGAGACACTAACGTCAGAAAATCGACGGCTGCAGAAAGAGCTGCAAGAGCTGAGAGCGTTGAAGAGCTCCAACTCATTTTACATGCAATTACCGGCGACGACTCTGACTATGTGCCCCTCTTGCGAGCGTGTCTCCCCCTCCTCAACGGCGGCGACCACCGCCGCCGCAGCAGCTTCAAAGACCTACACCGAACCCATAAAAGCGTCATCTGGGTTATCTTTTAGCAGACCCAGAAATTGGAGATGGAGGAGAGACCCAAAAGAGGAGAGGGTAGAAGAAATGAGGGCTGGGGACTATGGTCCTTGGACGCCCATATTCTCCGATGGTCGTTGTGGCGGTCGGAGGAGTAACTCTGGCGAAGGCGCAGCGTCCGCGGTGCGAGGAGGAAGCATTGCTGTGGAAGTGGGCAATTTGGCGCTTCATTTTTCTTAG | 1188 | 51.09 | MELGLSLGDASKSFGFVEKSRNQRVSAKDLGFCAGLSIGSTAFAGGKDAEGDGEEEEEEENGQREGNQFYREEDEARFVSYDGPVQLDLLPHTPVPRNLPSSIHGFHLPASEDGSSEAGSSARGLDVNQIPSTEADDGDASPTYNAAMSFPMYMGGGDGAGNEMGEADRVSRASDDDDNGPGRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALANQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTSENRRLQKELQELRALKSSNSFYMQLPATTLTMCPSCERVSPSSTAATTAAAAASKTYTEPIKASSGLSFSRPRNWRWRRDPKEERVEEMRAGDYGPWTPIFSDGRCGGRRSNSGEGAASAVRGGSIAVEVGNLALHFS | 395 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1733002 | 1737547 | + | BLOR15144 | Blo05g00182 | 60616 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo05g00182 | 395 | CDD | bZIP | 232 | 271 | - | - | |
Blo05g00182 | 395 | PANTHER | - | 78 | 328 | - | - | |
Blo05g00182 | 395 | Gene3D | - | 187 | 237 | - | - | |
Blo05g00182 | 395 | MobiDBLite | consensus disorder prediction | 43 | 73 | - | - | |
Blo05g00182 | 395 | Pfam | Homeobox associated leucine zipper | 239 | 273 | IPR003106 | GO:0006355|GO:0043565 | |
Blo05g00182 | 395 | Coils | Coil | 252 | 275 | - | - | |
Blo05g00182 | 395 | MobiDBLite | consensus disorder prediction | 114 | 139 | - | - | |
Blo05g00182 | 395 | ProSitePatterns | 'Homeobox' domain signature. | 214 | 237 | IPR017970 | GO:0000981|GO:0006355 | |
Blo05g00182 | 395 | PANTHER | PROTEIN, PUTATIVE-RELATED | 78 | 328 | - | - | |
Blo05g00182 | 395 | MobiDBLite | consensus disorder prediction | 168 | 185 | - | - | |
Blo05g00182 | 395 | Pfam | Homeodomain | 183 | 237 | IPR001356 | GO:0003677 | |
Blo05g00182 | 395 | SMART | halz | 239 | 282 | IPR003106 | GO:0006355|GO:0043565 | |
Blo05g00182 | 395 | MobiDBLite | consensus disorder prediction | 101 | 141 | - | - | |
Blo05g00182 | 395 | SUPERFAMILY | Homeodomain-like | 174 | 240 | IPR009057 | - | |
Blo05g00182 | 395 | CDD | homeodomain | 183 | 240 | IPR001356 | GO:0003677 | |
Blo05g00182 | 395 | MobiDBLite | consensus disorder prediction | 157 | 185 | - | - | |
Blo05g00182 | 395 | SMART | HOX_1 | 181 | 243 | IPR001356 | GO:0003677 | |
Blo05g00182 | 395 | ProSiteProfiles | 'Homeobox' domain profile. | 179 | 239 | IPR001356 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo03g00148 | Blo-Chr3:4015074 | Blo05g00182 | Blo-Chr5:1733002 | 9.12E-67 | dispersed | |
Blo05g00182 | Blo-Chr5:1733002 | Blo06g00035 | Blo-Chr6:723435 | 6.56E-64 | dispersed | |
Blo02g00382 | Blo-Chr2:4416399 | Blo05g00182 | Blo-Chr5:1733002 | 5.10E-45 | transposed | |
Blo10g00131 | Blo-Chr10:1488461 | Blo05g00182 | Blo-Chr5:1733002 | 4.65E-52 | wgd | |
Blo05g00182 | Blo-Chr5:1733002 | Blo06g00622 | Blo-Chr6:29128151 | 2.05E-160 | wgd | |
Blo05g00182 | Blo-Chr5:1733002 | Blo07g01279 | Blo-Chr7:32988904 | 5.28E-90 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12376 | PF00046 | Homeodomain | 1.20E-15 | CL0123 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo05g00182 | K09338 | - | nnu:104603567 | 333.954 |