Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00182 ATGGAGCTTGGGCTGAGCTTGGGAGATGCGTCCAAGTCATTTGGATTTGTTGAAAAATCTCGAAACCAAAGAGTTTCGGCCAAAGATTTAGGCTTTTGCGCTGGTTTATCCATTGGATCGACGGCTTTCGCCGGAGGGAAGGACGCAGAGGGAGATGGGGAAGAAGAAGAAGAAGAAGAAAATGGACAGCGGGAGGGAAATCAATTTTACAGAGAAGAGGATGAGGCTCGATTTGTTTCTTATGATGGACCAGTCCAACTCGACCTTCTTCCTCACACTCCTGTTCCTCGAAATCTTCCAAGTTCTATCCATGGCTTCCATTTGCCGGCGTCGGAAGACGGTAGCTCGGAAGCGGGTTCTTCAGCAAGAGGCCTCGACGTGAATCAAATACCTTCGACGGAGGCAGACGACGGAGACGCATCGCCGACGTACAATGCGGCGATGTCGTTTCCGATGTACATGGGTGGAGGAGACGGCGCCGGAAATGAAATGGGAGAGGCTGACAGAGTTTCCAGAGCAAGTGACGACGATGATAATGGCCCCGGCAGGAAAAAACTCAGACTTTCAAAAGAACAATCTGCCTTCTTAGAAGAAAGCTTCAAAGAACACAACACATTAAACCCAAAGCAAAAGCTTGCTCTAGCGAATCAGCTCAATCTCCGACCTCGACAAGTAGAAGTCTGGTTTCAAAATCGGAGAGCAAGGACGAAATTGAAGCAAACGGAGGTGGATTGCGAGTACTTGAAGAGATGCTGCGAGACACTAACGTCAGAAAATCGACGGCTGCAGAAAGAGCTGCAAGAGCTGAGAGCGTTGAAGAGCTCCAACTCATTTTACATGCAATTACCGGCGACGACTCTGACTATGTGCCCCTCTTGCGAGCGTGTCTCCCCCTCCTCAACGGCGGCGACCACCGCCGCCGCAGCAGCTTCAAAGACCTACACCGAACCCATAAAAGCGTCATCTGGGTTATCTTTTAGCAGACCCAGAAATTGGAGATGGAGGAGAGACCCAAAAGAGGAGAGGGTAGAAGAAATGAGGGCTGGGGACTATGGTCCTTGGACGCCCATATTCTCCGATGGTCGTTGTGGCGGTCGGAGGAGTAACTCTGGCGAAGGCGCAGCGTCCGCGGTGCGAGGAGGAAGCATTGCTGTGGAAGTGGGCAATTTGGCGCTTCATTTTTCTTAG 1188 51.09 MELGLSLGDASKSFGFVEKSRNQRVSAKDLGFCAGLSIGSTAFAGGKDAEGDGEEEEEEENGQREGNQFYREEDEARFVSYDGPVQLDLLPHTPVPRNLPSSIHGFHLPASEDGSSEAGSSARGLDVNQIPSTEADDGDASPTYNAAMSFPMYMGGGDGAGNEMGEADRVSRASDDDDNGPGRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALANQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTSENRRLQKELQELRALKSSNSFYMQLPATTLTMCPSCERVSPSSTAATTAAAAASKTYTEPIKASSGLSFSRPRNWRWRRDPKEERVEEMRAGDYGPWTPIFSDGRCGGRRSNSGEGAASAVRGGSIAVEVGNLALHFS 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1733002 1737547 + BLOR15144 Blo05g00182 60616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00182 395 CDD bZIP 232 271 - -
Blo05g00182 395 PANTHER - 78 328 - -
Blo05g00182 395 Gene3D - 187 237 - -
Blo05g00182 395 MobiDBLite consensus disorder prediction 43 73 - -
Blo05g00182 395 Pfam Homeobox associated leucine zipper 239 273 IPR003106 GO:0006355|GO:0043565
Blo05g00182 395 Coils Coil 252 275 - -
Blo05g00182 395 MobiDBLite consensus disorder prediction 114 139 - -
Blo05g00182 395 ProSitePatterns 'Homeobox' domain signature. 214 237 IPR017970 GO:0000981|GO:0006355
Blo05g00182 395 PANTHER PROTEIN, PUTATIVE-RELATED 78 328 - -
Blo05g00182 395 MobiDBLite consensus disorder prediction 168 185 - -
Blo05g00182 395 Pfam Homeodomain 183 237 IPR001356 GO:0003677
Blo05g00182 395 SMART halz 239 282 IPR003106 GO:0006355|GO:0043565
Blo05g00182 395 MobiDBLite consensus disorder prediction 101 141 - -
Blo05g00182 395 SUPERFAMILY Homeodomain-like 174 240 IPR009057 -
Blo05g00182 395 CDD homeodomain 183 240 IPR001356 GO:0003677
Blo05g00182 395 MobiDBLite consensus disorder prediction 157 185 - -
Blo05g00182 395 SMART HOX_1 181 243 IPR001356 GO:0003677
Blo05g00182 395 ProSiteProfiles 'Homeobox' domain profile. 179 239 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00148 Blo-Chr3:4015074 Blo05g00182 Blo-Chr5:1733002 9.12E-67 dispersed
Blo05g00182 Blo-Chr5:1733002 Blo06g00035 Blo-Chr6:723435 6.56E-64 dispersed
Blo02g00382 Blo-Chr2:4416399 Blo05g00182 Blo-Chr5:1733002 5.10E-45 transposed
Blo10g00131 Blo-Chr10:1488461 Blo05g00182 Blo-Chr5:1733002 4.65E-52 wgd
Blo05g00182 Blo-Chr5:1733002 Blo06g00622 Blo-Chr6:29128151 2.05E-160 wgd
Blo05g00182 Blo-Chr5:1733002 Blo07g01279 Blo-Chr7:32988904 5.28E-90 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12376 PF00046 Homeodomain 1.20E-15 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00182 K09338 - nnu:104603567 333.954