Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00200 ATGGACAGAGAGTGGGGATCGAAGCCGGGAAGTGGCGGCGCTGCATCGGCGCAGAATGAAGCAATCGACCGTAGGGAGCGGCTCAGGAGACTGGCTCTTGAGACCATCGATCTCGCAAAAGATCCCTATTTTATGCGCAACCATCTCGGGAGTTATGAGTGTAAGCTTTGTTTGACTCTTCACAACAATGAGGGAAATTATTTGGCGCACACACAAGGGAAGCGGCATCAAACTAATTTGGCTAAACGAGCGGCTCGTGAAGCCAAAGATGCTCCTGCTCAGCCTCAGCCTCACAAACGCAAAGTTTCTATACGCAAAACTGTTAAAATTGGTAGGCCTGGGTACAGGGTTACAAAGCAATTTGATCCTGAAACAAAGCAGAGGTCTTTGCTTTTTCAGATTGAATATCCTGAAATTGAAGACCTTGCAAAGCCAAGACATAGATTTATGTCCTCGTATGAGCAGAGAGTTCAACCTTTCGATAAAAGATATCAGTACCTTTTGGTTGCAGCTGAGCCGTATGAAATCATTGCTTTCAAGGTTCCAAGCACAGAAATAGACAAATCAACGCCAAAATTTTTCTCAAATTGGGATCCAGACTCAAAAATGTTCACGTTGCAATTATACTTCAAAATCAAGCCACCTGAACCGATCAAGCCTCAAAGTGCTCCTGCACCCAATGGCACAGGAGCTCCTGGAGCTCCTCCAAGGCCTTTGCTCCCACCCCCACCACCACCCCAGGGTCTACCACCTGGTGCAGTGCTACCATCAATACCTCCTCCTACCTTGGCCAATGGCCCTCGGCCAATGCCTCCGACTGGAACTCCGCCTGTCCCTCCTCCACCACCTACCATGGGAAATTTCAATCCTCCGATGCCTCCACATGGTTTTCCTGCCCCACCGACACAGGGGCAGGCTGCTCGGCCGCCGCCACCTCCTCCAAATATGGGACAAGCCCCAGGGCCGCCTCCGTTTCAGTGA 981 50.36 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVSIRKTVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLVAAEPYEIIAFKVPSTEIDKSTPKFFSNWDPDSKMFTLQLYFKIKPPEPIKPQSAPAPNGTGAPGAPPRPLLPPPPPPQGLPPGAVLPSIPPPTLANGPRPMPPTGTPPVPPPPPTMGNFNPPMPPHGFPAPPTQGQAARPPPPPPNMGQAPGPPPFQ 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2042326 2044699 + BLOR15162 Blo05g00200 60634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00200 326 MobiDBLite consensus disorder prediction 215 326 - -
Blo05g00200 326 MobiDBLite consensus disorder prediction 229 326 - -
Blo05g00200 326 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Blo05g00200 326 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Blo05g00200 326 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 312 - -
Blo05g00200 326 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
Blo05g00200 326 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Blo05g00200 326 Gene3D Classic Zinc Finger 46 89 - -
Blo05g00200 326 PRINTS Proline rich extensin signature 272 293 - -
Blo05g00200 326 PRINTS Proline rich extensin signature 294 310 - -
Blo05g00200 326 PRINTS Proline rich extensin signature 230 246 - -
Blo05g00200 326 PRINTS Proline rich extensin signature 258 270 - -
Blo05g00200 326 PRINTS Proline rich extensin signature 214 226 - -
Blo05g00200 326 Pfam Zinc-finger of C2H2 type 52 76 - -
Blo05g00200 326 MobiDBLite consensus disorder prediction 1 21 - -
Blo05g00200 326 Gene3D - 93 216 - -
Blo05g00200 326 SMART CactinC_cactus_3 89 217 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01185 Blo-Chr1:43797906 Blo05g00200 Blo-Chr5:2042326 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00200 K12826 - twl:119990474 431.795