Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00203 ATGGCAGACCCTTATTCCAATTACTTCAACGGCTGGTTCAACTTCATGCCTGTAGCTCCTCATTTTTCTTCTCTCACTTCTTACTACTCAGAACCCTCTCTTAATTTCTCTGCTCCTTTTCCCAGCCTGAACAAGGACGACGACGACATCATAATTACTAGTCAAAGAACTGCAAATTCCTCCTTCCAATCTCATTCCTTATTTCCGCCGTTATCTGAGCTCTCGACTCCTTCAATACAAGCTCTTCCATTGATAAACCAATTAAGCACAGATATTTATGAAAACTCTAGCAGTGCAGCAATGGAGGAGAAAGAAGCGAAGAATTTGGCCAATGAAGAGGACGATGAATCCTTGTCTGTAGCTCTAAGCATAGGCCTTCCTTGCCCTAACTTAGATTCAGAAACAAAGGATATTATTTCGCCCTCATTTTCGTATTCGGGTGAGAAGGATGAAAGCAGTTTGGTTTCAGATTTCCCTTTGTATAGACTGAACAAGGGTCAGTATTGGATTCCTACTCCTGCTCAGATTCTGATTGGTCCTACTCAATTTTCATGTCCACTTTGCTCTAAGGCTTTCAACAGATACAATAATCTCCAGATGCATATGTGGGGCCATGGCTCACAATACAGAAAAGGGCCAGACTCTCTGAAAGGAATCCAACCAACCGCCATGTTAAAGCTGCCTTGCTACTGCTGCGCAAATGGCTGCAAATACAACATCGACCACTCTCGATCAAGGCCGCTCAAAGATTTCAGAACTCTTCAGACCCATTACAAGAGAAAGCACGGGACTAAACCCTTCAGTTGTAGGAAATGCAGCAAACCATTTGCAGTGAAAGGCGACTGGAGAACGCATGAGAAGAACTGCGGGAAAATTTGGTATTGCTCTTGTGGATCTGATTTTAAGCACAAAAGATCGCTGAAAGATCACGTTAGGGCTTTCGGCCATAGCCATGGAGCTGTTGGCCTTGATTGCTTTGAAGAAGAGAACGATCCTGCGTCTGAAGTGGAACAAGATGATTATTACCCTTAA 1032 43.51 MADPYSNYFNGWFNFMPVAPHFSSLTSYYSEPSLNFSAPFPSLNKDDDDIIITSQRTANSSFQSHSLFPPLSELSTPSIQALPLINQLSTDIYENSSSAAMEEKEAKNLANEEDDESLSVALSIGLPCPNLDSETKDIISPSFSYSGEKDESSLVSDFPLYRLNKGQYWIPTPAQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPDSLKGIQPTAMLKLPCYCCANGCKYNIDHSRSRPLKDFRTLQTHYKRKHGTKPFSCRKCSKPFAVKGDWRTHEKNCGKIWYCSCGSDFKHKRSLKDHVRAFGHSHGAVGLDCFEEENDPASEVEQDDYYP 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2073554 2075878 - BLOR15165 Blo05g00203 60637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00203 343 SUPERFAMILY beta-beta-alpha zinc fingers 253 287 IPR036236 -
Blo05g00203 343 ProSiteProfiles Zinc finger C2H2 type domain profile. 183 210 IPR013087 -
Blo05g00203 343 PANTHER ZINC FINGER PROTEIN WIP2 1 339 IPR043584 GO:0003700|GO:0010468
Blo05g00203 343 SUPERFAMILY beta-beta-alpha zinc fingers 176 205 IPR036236 -
Blo05g00203 343 ProSitePatterns Zinc finger C2H2 type domain signature. 185 205 IPR013087 -
Blo05g00203 343 SMART c2h2final6 293 316 IPR013087 -
Blo05g00203 343 SMART c2h2final6 183 205 IPR013087 -
Blo05g00203 343 SMART c2h2final6 267 287 IPR013087 -
Blo05g00203 343 Gene3D Classic Zinc Finger 182 205 - -
Blo05g00203 343 Gene3D Classic Zinc Finger 225 318 - -
Blo05g00203 343 PANTHER ZINC FINGER PROTEIN WIP2-LIKE 1 339 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00203 Blo06g00606 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00203 Blo-Chr5:2073554 Blo11g00133 Blo-Chr11:1026571 2.24E-126 dispersed
Blo01g01759 Blo-Chr1:57342509 Blo05g00203 Blo-Chr5:2073554 1.81E-28 transposed
Blo08g00042 Blo-Chr8:355084 Blo05g00203 Blo-Chr5:2073554 5.14E-103 transposed
Blo05g00203 Blo-Chr5:2073554 Blo06g00606 Blo-Chr6:28838206 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12377 None None None None Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00203 - - nnu:104590092 425.631