Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00205 ATGAATGGGAACAGAGAAATGGACGTACATTATGTTGACTCTGGATTTCCTTATGCTGTCAATGAGAGCTTTATGAACTTCTTTGAAGGTCTTTCTCATGCTCCCATGAATTACTCACATCCCGGACCAGTTCACGATGAGGAAAATGCACAATGGTCAATGCATATGCAGTCCTACAAATTTGGTATATCGGATCCGGAAAGTACTTATTACAGCTCTTATGGGGGGAACAATTATTTACCTAGAACATACGAGACAGCTTGGGCATACCCTTCAACGATGAACATCGAGGAGCCAGTAACAGCAGATTTGCAGTCTGGTGGGGATGATGATGCTGTTGATCAGGATTCAGCGCCTGAAGAATGCAATTTCGATGATATGAACGCCGAAAGCTCTCAAGCATCTTCACAACCAGAGGTTCTATGGCAGGATAATATTGATCCTGATGACATGACCTATGAGGAATTAGTAGACTTAGGCGAGGCAGTTGGAATGGAGAATCGCGGTCTATCGAAGGAGCTTATTAGTTTGCTTCCGACTTCAAAGTACCGGCTAGGAAGTATCTTCTCAAAGAAAAAGTCAGGGGAAAGATGTGTGATTTGCCAGATGAGTTACAAAAGAGGCGACAAACAAACAACGTTGCCCTGCAAGCATGTGTATCATAATCATTGCATCTCTAAATGGCTTAACATCAACAAAGCATGTCCGATTTGCAACATCGAGGTATTTGGAGAGGAATCGAGCCGTTAA 750 42.93 MNGNREMDVHYVDSGFPYAVNESFMNFFEGLSHAPMNYSHPGPVHDEENAQWSMHMQSYKFGISDPESTYYSSYGGNNYLPRTYETAWAYPSTMNIEEPVTADLQSGGDDDAVDQDSAPEECNFDDMNAESSQASSQPEVLWQDNIDPDDMTYEELVDLGEAVGMENRGLSKELISLLPTSKYRLGSIFSKKKSGERCVICQMSYKRGDKQTTLPCKHVYHNHCISKWLNINKACPICNIEVFGEESSR 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2091018 2093124 + BLOR15167 Blo05g00205 60639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00205 249 MobiDBLite consensus disorder prediction 109 123 - -
Blo05g00205 249 Pfam Ring finger domain 197 239 IPR001841 -
Blo05g00205 249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 243 IPR013083 -
Blo05g00205 249 SMART ring_2 198 238 IPR001841 -
Blo05g00205 249 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BIG BROTHER 1 248 - -
Blo05g00205 249 SUPERFAMILY RING/U-box 197 243 - -
Blo05g00205 249 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 248 IPR033276 GO:0004842|GO:0016567|GO:0046621
Blo05g00205 249 MobiDBLite consensus disorder prediction 102 138 - -
Blo05g00205 249 ProSiteProfiles Zinc finger RING-type profile. 198 239 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00425 Blo-Chr4:3488006 Blo05g00205 Blo-Chr5:2091018 1.02E-29 dispersed
Blo05g00205 Blo-Chr5:2091018 Blo08g00096 Blo-Chr8:951200 1.54E-52 dispersed
Blo05g00205 Blo-Chr5:2091018 Blo14g00279 Blo-Chr14:2769330 1.87E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00205 K19045 - mnt:21395734 321.242