Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00280 ATGGCGGTTTGTGTTCTTCATCAATCTCCCACTCCTTCGTCTTCTCCCCCCCTCTCTCTCTCTCTCTCTCCTGATTCTTTCACTGATATGAAAGTGGGATACGAAGTAGTTCATGGGTCTGTGGAGACAATCCAACCCCATGAACAATGGGATTTCTCTAATTGCCTCAGAGTAGTCCAACCTCACACTTCGAGTCTCCTTACAAAGCCCGTAGGAGAAAACCAGAGTTCAAACATGGAGTCTAACGAGCTTTCGGAGTGGGTTGAACAAATTGCCAGCCAGTTCATTGATGATTCGCCGGATTCCAATGGAGACCGTACCTTGCATTTCGATTCGTCAATGGAGTCCTCCCCTTTCGGCGAGTTAGTGGCGAAGAAAACTGGCTCGAAACCTTGTTTCGATGCCAGTAGCGGGATTCATCAATGGAACATCGATCTTCAACATCGTGAAGAATTAAGCAGGGTAGATGAGTACGGATTAACTCTGATTAGTCTCCTGTTCGAGTGCGCCGTCGCGATCTCTGTTGATAATCTGGCGGATGCGCATCGAATGCTGCTTGAGCTAACGCAAATGGTGTCTCCGTATGGACCGTCGTGCGCAGAGCGAATCGTTGCGTATTTTGCCAAGGCCATGGCTAGTAGAGTCATAAACTCCTGGTTAGGTATGTGCTTTCCTCTGATCAACCATAAGAGCATCCATGGCGCTCTGCAGATCTTCAACGACGTCTCTCCCTTCATCAAATTCGCGCATTTCACTTCGAACCAAGCAATTTTCGAGGCCTTTCACGGCCGGGATCGAGTTCACATCGTCGATCTCGACATCATGCAAGGCCTACAATGGCCGGCTCTATTTCACATGCTCGCCTCTCGTGTCGAAGGCCCGCCTCAAGTGAGAATGACCGCCATCGGAACGTCAATGGAACTTCTAGTCGAAACCGGAGCGAAACTCTCGAATATCGCTCGAAAAATCAGAATATCTTTCGAGTTCCACCCGATCACCAGAAAATTTGGGGAAAGCGAAGCTTCTTCCATGGTGCAATTGAAGCGAGGAGAAACACTAGCTGTGCACTGGCTACAACATTCGCTCTACGATTTCAACGGTCCCGATTGGAAAACACTGAGTCTAATCCAAACATTCAAGCCCAAAATCTTCACCCTAGTAGAACAAGACATCATTCGCGGCGGTTCATTTCTCGATCGTTTCGTCGGTTCTCTCCACTACTATTCCACCATTTTCGACTCCCTCGGAGCTTACCTTCCGACCGACGATCAAAACCGGCACCACGTCGAGAGCTCCCTCCTGTACAGAGAAATCAACAACATATTGGCGATCGGAGGGCCGTCGCGGAGCGGAGAGGAAAAGTTTGAAAATTGGAGGAGCGAATTGAGGAAGAGTTTAACGGGAGTTCCGGCTAGCGGAAACTCAATTTTTCAAACGCAGTTGATGTTGAACATGTTCTCTCCTGCTCAAGGTTACACGCTCGTCAATGGCGATTTCGGGACGCTGAGTCTTGGTTGGAAGGGCACCAATCTGTACACTGCTTCTGCATGGACTTCTCCTCTTCCATAG 1569 49.01 MAVCVLHQSPTPSSSPPLSLSLSPDSFTDMKVGYEVVHGSVETIQPHEQWDFSNCLRVVQPHTSSLLTKPVGENQSSNMESNELSEWVEQIASQFIDDSPDSNGDRTLHFDSSMESSPFGELVAKKTGSKPCFDASSGIHQWNIDLQHREELSRVDEYGLTLISLLFECAVAISVDNLADAHRMLLELTQMVSPYGPSCAERIVAYFAKAMASRVINSWLGMCFPLINHKSIHGALQIFNDVSPFIKFAHFTSNQAIFEAFHGRDRVHIVDLDIMQGLQWPALFHMLASRVEGPPQVRMTAIGTSMELLVETGAKLSNIARKIRISFEFHPITRKFGESEASSMVQLKRGETLAVHWLQHSLYDFNGPDWKTLSLIQTFKPKIFTLVEQDIIRGGSFLDRFVGSLHYYSTIFDSLGAYLPTDDQNRHHVESSLLYREINNILAIGGPSRSGEEKFENWRSELRKSLTGVPASGNSIFQTQLMLNMFSPAQGYTLVNGDFGTLSLGWKGTNLYTASAWTSPLP 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3067637 3069205 - BLOR15242 Blo05g00280 60714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00280 522 ProSiteProfiles GRAS family profile. 153 518 IPR005202 -
Blo05g00280 522 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 518 IPR005202 -
Blo05g00280 522 Pfam GRAS domain family 162 518 IPR005202 -
Blo05g00280 522 PANTHER OS05G0485400 PROTEIN 36 518 - -
Blo05g00280 522 MobiDBLite consensus disorder prediction 7 21 - -
Blo05g00280 522 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00280 Blo-Chr5:3067637 Blo16g00714 Blo-Chr16:27676282 3.84E-59 dispersed
Blo10g00907 Blo-Chr10:28014474 Blo05g00280 Blo-Chr5:3067637 1.11E-34 dispersed
Blo19g00308 Blo-Chr19:19773514 Blo05g00280 Blo-Chr5:3067637 5.64E-26 dispersed
Blo05g00280 Blo-Chr5:3067637 Blo07g00834 Blo-Chr7:26522441 9.91E-106 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12389 PF03514 GRAS 1.80E-97 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00280 - - pvy:116143161 648.662