Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00283 ATGGGAGTGTTCGACTCTGATCCGGCTTTGATTGCGAAGACCACCGAACTGAAGCGGGAGTTGCAGAGACTGGTTAGTTCTATAATTGATGATGACGATGACAGTGCCGAGGCTGTCGATCAGGCGATGGAGACGTTGTGTGCTATGAAGCAATTGAAGCTCAGAAGGAGGTCGATGTCTTTGAATTCCGACCCGGCTCTTTGTTGTCCTGATGAATTTCGATGCTTTCTTTCTAAGGATTTGATGAGGGATCCTGTAATTCTGGCCTCGGGTCAGGTCTGTACTTACTTTCAGATAATGAAAACACTCATCATTGTTCAGTCAATTGTTACTCATTTGGCTGATAGATCGAGTTCTCTTCGTTTTCCCTTATGGTTTGTTGCCCCTTCCGTATTTGTTATGCAGACTTTTGACAGGCCCTTCATCCAGCAATGGTTAAAGGCAGGGAACCGGATTTGCCCTCGTACTCAACAAGTCCTTTCACACACAATTCTTGTTCCTAACCATTTGGTTAAGAAAATGATATCTCAATGGTGCATGACTCGAGGAATTGAATTTTCAGAGCCAGTTCATTATCTCACTGAGGAAGGGGTGGTGACGGACTCAGATCGCAATCATTTTCTTTGTTTGCTTGAGAAAATGTCTTCAACAATTTCTGATAAAAAAGAAGCGGCCAAAGAACTTCGACTATTGACAAAGAGAATGTCCTCATTCCGGGTGCTTTTTGGCGAGTATGCAGATGCAATTCTATTGTTACTTAGTCCACTATCTGAAGGCATGTCTCGTGAGGACTTTTCTGCCGATCTTCAAGAAGATATTATCACCACTCTTTTAAATCTGTCAATCCATGACAATAATAAAAAGCTTGTTGCTGAAACCCCAACTGCAATCCCTGTACTTATTGAAGCATTGAGGACAGGAACCATAGAAATAAGGAGCAATGCAGCCGCCGCCCTTTTCACGTTGTCAGCTCTTGACTCAAACAAGGCTCTAATAGGAAAATCTGGTGCTTTGAAATCTCTCATTGAGCTTTTGGAAGAAGGTGATTCATTATCCATGAAAGATGTAGCTTCGGCCATTTTTAATCTATGTATCCTCCACGACAACAAGGCAAGGGCTGTCAGGGATGGGGCTGTCAGGGTTATTTTGAAGAAGATCACAAACCGCTTGAATGTGGATGAATTGGTGGCGATTCTAGCAATGCTTTCAACCCATCAACGGGCTGTTGATGAAATGAAAGATCTTGGAGCCGTTGCTGTCTTGTTCAGCACTATGAGAGAGAGTAGTTGTTCTCGAAACAAGGAAAATTGTGTCGCGATTCTTCATGCAATCTGTTTTTATGATCGAACGAAGTGGAAAGAGATAAGGGACGAGGAAAATATTTATGGAACAATCTCAGAGCTAGCTCGAAATGGATCGCCAAGGGCCAAGAGAAAGGCTGCGGGCATACTGGAGAGATTGAATAGGGCTGTTAATATTACACATACTGCATAG 1494 43.04 MGVFDSDPALIAKTTELKRELQRLVSSIIDDDDDSAEAVDQAMETLCAMKQLKLRRRSMSLNSDPALCCPDEFRCFLSKDLMRDPVILASGQVCTYFQIMKTLIIVQSIVTHLADRSSSLRFPLWFVAPSVFVMQTFDRPFIQQWLKAGNRICPRTQQVLSHTILVPNHLVKKMISQWCMTRGIEFSEPVHYLTEEGVVTDSDRNHFLCLLEKMSSTISDKKEAAKELRLLTKRMSSFRVLFGEYADAILLLLSPLSEGMSREDFSADLQEDIITTLLNLSIHDNNKKLVAETPTAIPVLIEALRTGTIEIRSNAAAALFTLSALDSNKALIGKSGALKSLIELLEEGDSLSMKDVASAIFNLCILHDNKARAVRDGAVRVILKKITNRLNVDELVAILAMLSTHQRAVDEMKDLGAVAVLFSTMRESSCSRNKENCVAILHAICFYDRTKWKEIRDEENIYGTISELARNGSPRAKRKAAGILERLNRAVNITHTA 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3109281 3111030 + BLOR15245 Blo05g00283 60717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00283 497 PANTHER U BOX DOMAIN-CONTAINING 4 495 - -
Blo05g00283 497 SUPERFAMILY RING/U-box 69 103 - -
Blo05g00283 497 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 9 4 495 - -
Blo05g00283 497 ProSiteProfiles U-box domain profile. 68 185 IPR003613 GO:0004842|GO:0016567
Blo05g00283 497 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 295 337 IPR000225 GO:0005515
Blo05g00283 497 SUPERFAMILY ARM repeat 216 487 IPR016024 -
Blo05g00283 497 SMART Ubox_2 72 178 IPR003613 GO:0004842|GO:0016567
Blo05g00283 497 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 185 IPR013083 -
Blo05g00283 497 Gene3D - 207 494 IPR011989 -
Blo05g00283 497 SUPERFAMILY RING/U-box 135 188 - -
Blo05g00283 497 SMART arm_5 405 446 IPR000225 GO:0005515
Blo05g00283 497 SMART arm_5 283 324 IPR000225 GO:0005515
Blo05g00283 497 SMART arm_5 325 365 IPR000225 GO:0005515
Blo05g00283 497 Pfam U-box domain 70 94 IPR003613 GO:0004842|GO:0016567
Blo05g00283 497 Pfam U-box domain 135 182 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00283 Blo-Chr5:3109281 Blo10g00673 Blo-Chr10:21604615 0 dispersed
Blo05g00283 Blo-Chr5:3109281 Blo06g00511 Blo-Chr6:27208841 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00283 - - pvy:116113651 614.379