Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00293 ATGGCTTCTAAATCCCACCTCCTTTTTGTGGCGGCAACTACATTTTTGTTTCTTCTTCTAGTTTCTGCGGATATTCCTCCGACTACTCCGGTGACTACTGGTTCCATTTGCCGGTCGACCCAAGATCCTTCCTTTTGCAAATCTGTACTCCCCAATGGAACCGGAAATGTCTATGATTTCGGCCGGTTTTCGGTCCGGAAGTCACTGTCGCAGTCGAGAAAGTTCTTGAACTTAGTAAATAAGTATCTCAGTCGACGGTCTTCCTTGACGTTGACTGCCATTAGAGCTCTCGAAGATTGCCAGTTACTGGCAGAGTTAAATATGGATTATTTATTGACCTCATTCCGAACTGTAAACGGTTCTAGCGGAACTCTTCCGGATATGCAAGCTGACTACTTACAGACATTGCTCAGCGCCATTTTGACTAATCAACAGACCTGTTTAGACAGTTTAACATCGACTGCTTCGGCTTGGAGTTTGAGAAATGGACTCGCTCTCCCTCTCGCTAATGATACTAAGCTTTACAGTGTTTCGTTAGCTCTGTGTACCAGAGGGTGGGTGCCGAAGAAGAAGAAGAAGAAAAGCTCGTCTTCGTGGATTCCGTCCAGGAAGAATCTGGGGTTCAAAAAGGGGCATTTGCCGATGAAAATGTCAGCCCGAACTCAGGCCATTTACGAGAAATTTAGCCGGAGGAACCTGCTGCAGACAGACGACGACGATTCGGTTTCACTTGCCGATATTGTGGTGGTTAGCCAAGATGGAAGTGGAAACTTCACCACCATTAACGACGCCATTGCTGCAGCTCCGAATAACTCGGCCATCGATGACGGGTATCTTCTGATATACGTCACAGCCGGCGTTTACGAAGAGTACGTTTCCATTGCGAAAAATAAACGGTATTTAATGATTGTCGGAGATGGAATAAATCAGACCATTATCACCGGTAATAGAAGCGTCGTCGATGGGTGGACTACTTTCAACTCTGCAACGTTCGCCGTAGTCGGTCCAGGATTCATCGGAATGGACTTAACCATCAGAAACACAGCCGGAGCCATAAAACACCAGGCCGTCGCGCTCCGAAACGGAGCCGACTTATCAGTCTTCTACCGCTGCAGCTTCGAAGGTTACCAAGACACTCTCTACGCCCACTCCCTCCGACAATTCTACAGAGAATGCGACGTCTATGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGTCGTCCTCCAAAACTGCAATCTGTACCCTCGGCTCCCCCTATCCAACCAATTCAACGCCATTACAGCTCAAGGAAGAACAGACTCGAACCAAAACACCGGCACTTCGATCCAAAACTGCACAATCGTAGCCGCCGACGATCTAGCTTCCAGTAACAGCAGCATTCAGACCTACCTGGGCAGGCCGTGGAAGGAGTATTCGAGAACGGTCTATATGGAGAGTTCTATGGGGAGTTTGATTAATCCGGCTGGTTGGATGGCTTGGAACGGCGACTTCGCTCTGACCACGTTGTACTACGCCGAGTTCAACAATTCAGGGCCGGGATCTAATACCACCGGAAGAGTTACGTGGGCTGGATACCATGTGATTAATTCCACCGAGGCTGCTAACTTTACGGTTTCTACGTTTTTGCTGGGAGATGATTGGTTGCCCCAAATCGGAATCCCTTATACCGGAGGCTTGATAAGCTGA 1689 48.73 MASKSHLLFVAATTFLFLLLVSADIPPTTPVTTGSICRSTQDPSFCKSVLPNGTGNVYDFGRFSVRKSLSQSRKFLNLVNKYLSRRSSLTLTAIRALEDCQLLAELNMDYLLTSFRTVNGSSGTLPDMQADYLQTLLSAILTNQQTCLDSLTSTASAWSLRNGLALPLANDTKLYSVSLALCTRGWVPKKKKKKSSSSWIPSRKNLGFKKGHLPMKMSARTQAIYEKFSRRNLLQTDDDDSVSLADIVVVSQDGSGNFTTINDAIAAAPNNSAIDDGYLLIYVTAGVYEEYVSIAKNKRYLMIVGDGINQTIITGNRSVVDGWTTFNSATFAVVGPGFIGMDLTIRNTAGAIKHQAVALRNGADLSVFYRCSFEGYQDTLYAHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRLPLSNQFNAITAQGRTDSNQNTGTSIQNCTIVAADDLASSNSSIQTYLGRPWKEYSRTVYMESSMGSLINPAGWMAWNGDFALTTLYYAEFNNSGPGSNTTGRVTWAGYHVINSTEAANFTVSTFLLGDDWLPQIGIPYTGGLIS 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3296310 3298127 + BLOR15255 Blo05g00293 60727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00293 562 SUPERFAMILY Pectin lyase-like 245 559 IPR011050 -
Blo05g00293 562 Gene3D - 242 560 IPR012334 -
Blo05g00293 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 184 IPR035513 -
Blo05g00293 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 183 IPR035513 -
Blo05g00293 562 CDD PMEI-like_3 35 181 - -
Blo05g00293 562 Pfam Plant invertase/pectin methylesterase inhibitor 35 181 IPR006501 GO:0004857
Blo05g00293 562 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 26 559 - -
Blo05g00293 562 Pfam Pectinesterase 248 546 IPR000070 GO:0030599|GO:0042545
Blo05g00293 562 SMART PMEI_2 26 181 IPR006501 GO:0004857
Blo05g00293 562 PANTHER PECTINESTERASE 26 559 - -
Blo05g00293 562 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00293 Blo06g00502 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00293 Blo-Chr5:3296310 Blo16g00613 Blo-Chr16:24726464 1.72E-139 dispersed
Blo10g00957 Blo-Chr10:28640646 Blo05g00293 Blo-Chr5:3296310 6.08E-84 transposed
Blo05g00293 Blo-Chr5:3296310 Blo06g00502 Blo-Chr6:26918789 1.24E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00293 K01051 - cit:102613865 825.469