Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00299 ATGACGGAGATTCCAAGTACCGGCGTCCCCGAGACTCCGACGACTATGAGCGTCTACATAAATAAAATCAACGAGAAAGTAAAGCTCGAAGGCAGCGTTAAAAAGTTGTTACTTGGAGTTCGAACTTGTTATTTTGGTCGGGAGTGTGGGTTTGTTGAAGAGTTGAAGAAATCGCTAAACGCAGTGTTTTCTGAGCTCGGGAAGATACTGGAGGTATTGGCGTTCAAGACACTAAAGCACAAAGGACTTTTATCTGGGTTTTGTGGCTTGAAATCTTTGGTGAATCAAATTTTTACTTTACCAGACAATCAAGGTCATCAAATGGTCTGCAGCCTGGTTCTAGTCTGGCCTAAACCTGTTGTTTACAGTCCTGACCTCTCTAATATATACTCCTCTAAAATGGTGTTTGAATCTAAAAAGGTTTCAACCATCTTTCTGACACCTTTCTCGGCGAAAATGGCTAAAAGTCTCAAAGTCGACGAGCTTCGCACTCAACTGGCTCAGCGTGGGCTGACTACTACTGGAACCAAGCCCACTCTGGTTCGTCGATTAGAATCAGCCATTCGCAAAGAAAACAAGCAATCTTGCGATGGAGCCGACGTTTCAGATGGTACGAAGAAGAGGGAACGGGACAGTGAGGAAAACGAGGATTCCAATGGGCAAGAGAAAATCAAAGCTGTCGAGAAATTTCGAGGAATGGGTATTCAGAAACTGAGAGAAGAAGCTGTGCTGAGGGGTATTCCGAGTACTGGGTCAAAGAAGGAACTATTGGAGAGGCTGTGCAAAGATTCTGAAGCTGAACCAAATGATGCAGACGACATTGCTAAAGCTTCTGAAGAAGAAAATGCCAGCAAAAAGGAAAAGATTGTGACCGCCACCAAAAAGGGGGCTGCAGTGCTGGATCAATGGCTTCCTGATTTTATAAAGACACAGTACCATGTTTTGCAAGTGGGGGATGAAATCTATGATGCGATGTTGAACCAGACAAATGTTAGAGACAATAATAACAAGTTTTATGTGATTCAAGCTCTTGAATCTGATGATGGTAATAGTTTCATGGTTTACAATCGATGGGGAAGAGTTGGCGTGAAGGGTCAAGACAAGCTACAAGGCCCTTACCCGTCACGAAGCTATGCCATTGAGGAGTTTGAGAAGAAATTCCTTGCCAAAACTGGGAACTATTGGTCCGATCGAAAGGACTTCGTTTGTTATCCAAAGAGTTATACCTGGTTGGAGATGGACTATAGCGAAAATGAAAAAGAATCATCGGTCAAAGAAAAGCCTAACACGGGTAAAGAGCTTCAACCTCGAGGGACACAACTTGAGCCACATATTGCAAACTTCATCTCTCTTATTTGCAACATCAGCATGATGAAGCAACAAATGATGGAAATAGGGTACAATGCTGAAAAGTTGCCACTTGGCAAACTCAGCAAATCTACAATCTTGAAGGGCTACGATGTCTTGAAAAGAATAGCTGATGTGGTTGGTCTTGCTCAGCGCGATAGAAGGACACTCGACCAATTAAGTGGGGAGTTTTACACTGTCATTCCTCATGACTTCGGATTCAAAAAAATGAGTGACTTTGTGATTGACACCCCACAAAAATTGAAGAGCAAGCTTGAAATGGTCGAAGCGCTTGCAGAAATTGAGGTTGCCACTAAGTTGTTACAGGAAGACTCTATTATGAAGGAAGATCCCTTATTCTCTCACTACAAGAGCCTTAAATGTGAACTTACACCTCTGGATGTTAATGGCGAAGAGTTCTCTATGGTATCTGAGTATATGAAGAACACACATGCAAAAACGCACTCAAACTATACCGTCGACATTGTTCAAATGTTCAGGGTAGCAAGAGACGTGGAAGTTGATCGCTTCAAAAAATTTTCTAGCACGAAAAATAGATTCCTCCTATGGCACGGATCTCGGCTGACAAACTGGATGGGCATATTATCCCAAGGTTTGCGAATTGCTCCTCCTGAAGCACCCGTAACTGGTTATATGTTTGGGAAGGGGGTCTACTTTGCCGATATGTTCTCCAAAAGTGCAAATTATTGCTATGCGTCTTCTTTTGCTCCTACTGGTGTGCTTCTCTTATGTGAGGTTGTTGCACTTGGTGATATGGAGGAGCTTCTATATGCTAAATATGATGCTGACAATTTGCCGGAGGGAAAGTTGAGCACGAAAGGAGTAGGAGGCACTGCACCGGATTTCTCCAAAGCTTTGACCCTCGATGACGGAGTGGTCGTTCCCTCAGCGAAGCCAAAGAAGAATTCGACTTCAAAGGGTGCCTTACTCTACAACGAGTACATAGTGTACAACGTGGATCAAATACGAATGCGATACGCCCTTCAAGTAAACTTCAACTACAAACGGTGA 2379 43.34 MTEIPSTGVPETPTTMSVYINKINEKVKLEGSVKKLLLGVRTCYFGRECGFVEELKKSLNAVFSELGKILEVLAFKTLKHKGLLSGFCGLKSLVNQIFTLPDNQGHQMVCSLVLVWPKPVVYSPDLSNIYSSKMVFESKKVSTIFLTPFSAKMAKSLKVDELRTQLAQRGLTTTGTKPTLVRRLESAIRKENKQSCDGADVSDGTKKRERDSEENEDSNGQEKIKAVEKFRGMGIQKLREEAVLRGIPSTGSKKELLERLCKDSEAEPNDADDIAKASEEENASKKEKIVTATKKGAAVLDQWLPDFIKTQYHVLQVGDEIYDAMLNQTNVRDNNNKFYVIQALESDDGNSFMVYNRWGRVGVKGQDKLQGPYPSRSYAIEEFEKKFLAKTGNYWSDRKDFVCYPKSYTWLEMDYSENEKESSVKEKPNTGKELQPRGTQLEPHIANFISLICNISMMKQQMMEIGYNAEKLPLGKLSKSTILKGYDVLKRIADVVGLAQRDRRTLDQLSGEFYTVIPHDFGFKKMSDFVIDTPQKLKSKLEMVEALAEIEVATKLLQEDSIMKEDPLFSHYKSLKCELTPLDVNGEEFSMVSEYMKNTHAKTHSNYTVDIVQMFRVARDVEVDRFKKFSSTKNRFLLWHGSRLTNWMGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASSFAPTGVLLLCEVVALGDMEELLYAKYDADNLPEGKLSTKGVGGTAPDFSKALTLDDGVVVPSAKPKKNSTSKGALLYNEYIVYNVDQIRMRYALQVNFNYKR 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3360435 3369209 + BLOR15261 Blo05g00299 60733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00299 792 SMART WGR_cls 322 402 IPR008893 -
Blo05g00299 792 ProSiteProfiles SAP motif profile. 230 264 IPR003034 -
Blo05g00299 792 ProSiteProfiles SAP motif profile. 154 188 IPR003034 -
Blo05g00299 792 ProSiteProfiles WGR domain profile. 311 408 IPR008893 -
Blo05g00299 792 PANTHER DNA LIGASE 189 791 - -
Blo05g00299 792 PANTHER POLY [ADP-RIBOSE] POLYMERASE 2 189 791 - -
Blo05g00299 792 ProSiteProfiles PARP catalytic domain profile. 566 792 IPR012317 GO:0003950
Blo05g00299 792 Gene3D SAP domain 205 276 IPR036361 -
Blo05g00299 792 Gene3D SAP domain 147 199 IPR036361 -
Blo05g00299 792 Pfam SAP domain 155 187 IPR003034 -
Blo05g00299 792 Gene3D - 576 792 - -
Blo05g00299 792 CDD WGR_PARP3_like 314 415 - -
Blo05g00299 792 CDD parp_like 439 786 - -
Blo05g00299 792 SUPERFAMILY ADP-ribosylation 575 791 - -
Blo05g00299 792 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 439 573 IPR036616 GO:0003950
Blo05g00299 792 Coils Coil 275 295 - -
Blo05g00299 792 SUPERFAMILY SAP domain 155 192 IPR036361 -
Blo05g00299 792 MobiDBLite consensus disorder prediction 261 286 - -
Blo05g00299 792 Gene3D - 430 575 IPR036616 GO:0003950
Blo05g00299 792 Pfam WGR domain 322 401 IPR008893 -
Blo05g00299 792 Pfam Poly(ADP-ribose) polymerase, regulatory domain 440 572 IPR004102 GO:0003950
Blo05g00299 792 MobiDBLite consensus disorder prediction 191 224 - -
Blo05g00299 792 Pfam Poly(ADP-ribose) polymerase catalytic domain 587 787 IPR012317 GO:0003950
Blo05g00299 792 SMART sap_9 230 264 IPR003034 -
Blo05g00299 792 SMART sap_9 154 188 IPR003034 -
Blo05g00299 792 ProSiteProfiles PARP alpha-helical domain profile. 438 558 IPR004102 GO:0003950
Blo05g00299 792 SUPERFAMILY WGR domain-like 287 413 IPR036930 -
Blo05g00299 792 Gene3D WGR domain 329 401 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00299 Blo07g01027 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00299 Blo-Chr5:3360435 Blo07g01027 Blo-Chr7:30084584 7.31E-101 dispersed
Blo10g00076 Blo-Chr10:729405 Blo05g00299 Blo-Chr5:3360435 5.65E-13 wgd
Blo10g00076 Blo-Chr10:729405 Blo05g00299 Blo-Chr5:3360435 5.65E-13 wgd
Blo05g00299 Blo-Chr5:3360435 Blo06g00500 Blo-Chr6:26835933 5.94E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00299 K10798 - qsu:111993037 946.421