Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00316 ATGAGAAGGAAGAACGGAACCTTTAGGAGAAGGAGCAAGAAAATGGAGGCGGCCTTAAGTAGACATATGGAGGTTCAGACCGGGAAAGTTACCCTGGCTCCTTTCCAGCTTCCTCGATCGTGTTTCACCTCTTCATCGTCATCCGCTTCTTGTTGTCTAGATCATTTGGAGTCAGAAATTTCAGCACCGGAGACTTCTCGCCTTTTCCCTTCCTCTTCTCCTCGTGGAGGGGCTGATTACGATTCCATTGTTGAGGATAAAGATTTCATTCTCAGCCAAGACTTCTTTTGCACGCCAGACTATATCACTCCGGATAATCAACACTTGTTCAATAACTTGGATTTGAATAAGGATGATATTCCTTGCCCTAAATCTCCAGAGAAACTTAATACTGTAAAAAGTAAGAGGCGTCGACAAGGTTCTGTCCTAGTAAATCCTCAGAGTCCGACCTCGTATGGTCATCAGCAAGTAGTGGAACTTGGAAATGAAATTTACGGTGGAGATGAATTGAAATCAGAGAAAATAGTAACCGGAGCAAAGAAGATTCAAAACTATGTCTCTCAATCTGCAGTTGCTTTACGTTGTAGAATAATGCCGCCTCCATGTATGAAGAACCCTTATTTGAGAGATGCCTCAGAAATAAGTGTAGATCCTTTTGGTAATCAAAGAACAAAATGTGCAGGTTTCTTTCCTTCACTGGTAGGCGGAGACAGCCTTGCCCGTTATTACACTGACTTTCAAGAGATTGAGCATATTGGTACTGGGAACTTCAGCCATGTTTTTAAAGCATTGAAGAGAATTGATGGTTGCTTGTATGCTGTCAAACATAGTACGAGGAAGTTGCATCAAGACATGGAAAGAAGGAGAGCATTAATGGAAGTTCAGGCTTTGGGAGCTATTGGATTTCATGAAAACATCGTTGGATACTATTCTTCCTGGTTCGAGAATGAGCAACTTTACATTCAGATGGAACTTTGTGATTGCAGCTTATCCATCAACAAAGCTTCTCAATCATTCACCGAAGTAGAAGTATTAAAAGTGTTGCATCAGATTGCAAAGGCCTTGCAGTTCATACATGAAAAGGGAATCGCTCATTTGGATGTAAAACCTGACAATATTTACGTGAAAAATGGTATTTATAAGCTTGGGGATTTTGGATGTGCAACTCTTCTGGACAAGAGCCTGCCAATTGAAGAAGGCGATGCACGGTATATGCCCCACGAAATCCTAAATGATAGATATGATTATCTTGACAAGGTTGACATTTTCTCCTTGGGAGCTGCAATCTTTGAGCTTATAAGAGGATCGGCTTTACCAGAATCAGGGCCACATTTAATGAATCTTAAGGAAGGCAAACTGCCGCTTCTTCCTGGTCACTCATTGCAGTTTCAAAACTTACTCAAGGTAATGCTGGATCTCGATCCAGTGCGGCGACCATCAGCCAAGGAGATTGTAGAGAATCCGATATTTGACAAACTTGGTGCGAGTGGAGCAAGAAGGTAG 1503 41.98 MRRKNGTFRRRSKKMEAALSRHMEVQTGKVTLAPFQLPRSCFTSSSSSASCCLDHLESEISAPETSRLFPSSSPRGGADYDSIVEDKDFILSQDFFCTPDYITPDNQHLFNNLDLNKDDIPCPKSPEKLNTVKSKRRRQGSVLVNPQSPTSYGHQQVVELGNEIYGGDELKSEKIVTGAKKIQNYVSQSAVALRCRIMPPPCMKNPYLRDASEISVDPFGNQRTKCAGFFPSLVGGDSLARYYTDFQEIEHIGTGNFSHVFKALKRIDGCLYAVKHSTRKLHQDMERRRALMEVQALGAIGFHENIVGYYSSWFENEQLYIQMELCDCSLSINKASQSFTEVEVLKVLHQIAKALQFIHEKGIAHLDVKPDNIYVKNGIYKLGDFGCATLLDKSLPIEEGDARYMPHEILNDRYDYLDKVDIFSLGAAIFELIRGSALPESGPHLMNLKEGKLPLLPGHSLQFQNLLKVMLDLDPVRRPSAKEIVENPIFDKLGASGARR 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3576207 3579886 + BLOR15278 Blo05g00316 60750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00316 500 ProSitePatterns Protein kinases ATP-binding region signature. 252 275 IPR017441 GO:0005524
Blo05g00316 500 PANTHER BNAA08G27310D PROTEIN 71 404 - -
Blo05g00316 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Blo05g00316 500 PANTHER BNAA08G27310D PROTEIN 417 493 - -
Blo05g00316 500 Gene3D Transferase(Phosphotransferase) domain 1 325 494 - -
Blo05g00316 500 SUPERFAMILY Protein kinase-like (PK-like) 238 493 IPR011009 -
Blo05g00316 500 Pfam Protein kinase domain 246 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00316 500 Gene3D Phosphorylase Kinase; domain 1 236 324 - -
Blo05g00316 500 MobiDBLite consensus disorder prediction 136 150 - -
Blo05g00316 500 MobiDBLite consensus disorder prediction 121 150 - -
Blo05g00316 500 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 71 404 - -
Blo05g00316 500 ProSiteProfiles Protein kinase domain profile. 246 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00316 500 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 417 493 - -
Blo05g00316 500 SMART serkin_6 246 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00316 Blo-Chr5:3576207 Blo01g00199 Blo-Chr1:2628327 4.45E-22 dispersed
Blo05g00316 Blo-Chr5:3576207 Blo17g00197 Blo-Chr17:1987384 3.67E-22 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84288 PF00069 Pkinase 1.90E-48 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00316 K06632 - csv:101213255 689.108