Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00328 ATGTTATCTTTCTTTTGTGACAGTGAGCTTGTTGGACTCATCCTCGAGATCGAACCAGCAGGCATCATGGGTTTCAACCTGGGCTCTCTCCTGACATCGATGTTAAAATCCAACCCGGGCGAAGCTCGTGTCGATTCAGTAACATTATTTGTGTTGCTTCTCTGTGCTTGTGTCATTATTGGTCATCTTCTCGAGAAGAATCGTTATATGAACGAGTCGATTACTGCCTTAGCGATTGGTCTTTTCACGGGGATTGTCATTTTGTTTTCGACCGAAGGAAAAAGCTCTCATCTCTTGGTGTTTAATGAACAGCTGTTCTTCATCTATCTTCTTCCACCAATTATTTTTAATGCGGGGTTTCAGGTGAAAAAGAAGCAATTCTTCAGAAACTTCTCGACAATTGTTTCATTCGGTGCCGTTGGTAGCTTGATATCTTTTTTCATCATATCGCTAGGTTCAATGTATCTGTTCAAGAAATTGGATGTTGGCTTCTTAGAGGTGGCTGATTATTATGCACTTGGAGCAATCTTAACTGCAACCGATACGGTTTGTACCTTGCAGGTGCTTAATCAGGACGACATGCCTTTGCTGTACAGTCTAGTCTTTGGTGAAGGTGTAGTAAATGATGCGACTTCTGTGGTCCTTTTCCATGCAATCCGGAAATTCGACCTTTCCCACATTACTTCGATCAATGCCATTCAGCTAGTTGGCAATTTCTTCTATTTGTTCTTAACTAGCACTTTGCTGGGGATATCTGTCGGTTTGCTCAGTGCTTACATCATTCGGAAACTGTACCTTGGCAGGCACTCTGCTGATCGGGAAATTTCTCTAATGATTCTAATGGCTTACCTTTCATATATGTTGGCCGAACTGTGCATGCTAAGCGGTATTCTTACAGTCTTCTTTTGTGGGATCGTCATGTCACACTACACCTGGTATAACGTGACGAAGAGTTCAAAAGTCACTACCAAGCATGCTTTTGCCACACTATCATTTATTTCAGAGATTTTCATCTTCCTCTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAAATTTGTACTCAAGAGCCCTGGGACGTCAATTACAGTGAGTTTAATACTGTTTGGTCTGGTTCTTGTTGGAAGAGCGGCTTTTGTCTTCCCCCTCTCTTTCGTATCCAACTTGAGTCGGAAGCAAAAGAGCGACAAAATCGGGTTCAGGAAACAGATTACAATTTGGTGGGCTGGACTGATGAGAGGTGCTGTATCAGTGGCACTTGCTTATGATCATTTTACGAGATCCGGACAAACCCAACTTCGAGGGAACGCGATCATGATCACAAGCACGATAAGCATTGTTCTCTTTACAAATATGGTATGTGGGTTATTGACTAAGCCTCTGATAAGGCAGTTGCTTCCATCAAATAGACCCAGAGAAGAAGACGGTCTTGCACTCTCGGACTCGCCTTCGCTCTCTAGCCCACTGCTATTGTACGGGCCCGGTCAAGAAGATCAAGGAATCGATACGAGTGGCAACTCGACTCTCGGACCACAACCGAGGAGCTTGTTGCGCTCCATTCATCACTACTGGCGATTGCTAGACGACGCTTACATGCGGCCCCTCTTTGGGGGAAGAGGTTTTGCGTCGAACAGTCCCACTTCGGTATTTGATAAGTTACTTCGATAA 1671 43.99 MLSFFCDSELVGLILEIEPAGIMGFNLGSLLTSMLKSNPGEARVDSVTLFVLLLCACVIIGHLLEKNRYMNESITALAIGLFTGIVILFSTEGKSSHLLVFNEQLFFIYLLPPIIFNAGFQVKKKQFFRNFSTIVSFGAVGSLISFFIISLGSMYLFKKLDVGFLEVADYYALGAILTATDTVCTLQVLNQDDMPLLYSLVFGEGVVNDATSVVLFHAIRKFDLSHITSINAIQLVGNFFYLFLTSTLLGISVGLLSAYIIRKLYLGRHSADREISLMILMAYLSYMLAELCMLSGILTVFFCGIVMSHYTWYNVTKSSKVTTKHAFATLSFISEIFIFLYVGMDALDIDKWKFVLKSPGTSITVSLILFGLVLVGRAAFVFPLSFVSNLSRKQKSDKIGFRKQITIWWAGLMRGAVSVALAYDHFTRSGQTQLRGNAIMITSTISIVLFTNMVCGLLTKPLIRQLLPSNRPREEDGLALSDSPSLSSPLLLYGPGQEDQGIDTSGNSTLGPQPRSLLRSIHHYWRLLDDAYMRPLFGGRGFASNSPTSVFDKLLR 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3757500 3765174 + BLOR15290 Blo05g00328 60762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00328 556 Gene3D - 166 217 - -
Blo05g00328 556 PANTHER SODIUM/HYDROGEN EXCHANGER 31 552 IPR018422 GO:0006812|GO:0015299|GO:0016021
Blo05g00328 556 PRINTS Na+/H+ exchanger signature 119 133 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo05g00328 556 PRINTS Na+/H+ exchanger signature 105 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo05g00328 556 PRINTS Na+/H+ exchanger signature 134 142 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo05g00328 556 PRINTS Na+/H+ exchanger signature 174 184 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo05g00328 556 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 47 466 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Blo05g00328 556 Pfam Sodium/hydrogen exchanger family 51 464 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Blo05g00328 556 PANTHER SODIUM/HYDROGEN EXCHANGER 31 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00088 Blo-Chr1:1199412 Blo05g00328 Blo-Chr5:3757500 0 dispersed
Blo05g00328 Blo-Chr5:3757500 Blo18g00601 Blo-Chr18:9356710 0 dispersed
Blo05g00328 Blo-Chr5:3757500 Blo18g00584 Blo-Chr18:8744593 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00328 - K14724 cpap:110821440 716.457