Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00376 ATGACGGTGAATCGGACCTTGAAGCTAATTTTGTTAGGAATTCTACTCTCTATTCCCATTTGTCGCGGAGAATCATCGACGTGCTTGACAATCTACAAGGAAGGTGGTGCTCCGGCCGTCTTCCAATCCCCGAAATGCCCCCGCTGGAAGCTCCCCAATTACTTCTCTCGACCTCCAACATCTGCGCGTTGCCAATCCGCCTTGCGTCTCGGTCGCAGAAAGTCTCAGGAAGATCGCACTCTCTGCGCCCTCGATATCCGAATTCCCTTCCCCGTTATGGCAGGGTTCAAGGAGGTTGTTGTTGGGATTGTGGCAGTTTTTGACGGTCATAATGGAGCAGAAGCTAGTGAAATGGCTTCGAAGTTCTTATTAGAGTATTTTTTGTTACACACTTATTTTCTTTTAGACTCCACATACTCTGCTGTATTCAAGAAATCCACCAGAAAATTGTCATATCAGGGAGGGCATGAGACAATTTTTCAAATGTTTAATGGGGACAAAGAACTACACCATCAAGAATCGGATATTGGAAGGTTTAAATATTCGTTACCAGCTGGTTCTGATGATCATTTCCACCTGGAAATATTGAAGGAAGCGTTGTTGAGAGCAATCCATGATATTGATGCGACATTTTCAAAGGCATCATCTAATTATAATCTTAATTCCGGATCAACCGCCACAGTTATTTTAATGGCAGACGACCAAATTTTAGTTGCTAACATTGGAGATTCAAAGGGATTTTTGTGCTCAGAAACGTTTCAGTCACCTGCTGAGGCTAAAGCCACCATTTTAAGGTTATACATGCAGAAAAGACAAAGTGGTACTCTTTCACGTTTAAGAGGATATGGCAACTCCAAAACTCTGACCTCCAATGGAATGAATTTTCTTTCTGTTAAAGAGTTGACGAGGGATCATCATCCAGATAGAGACGATGAAAGGTCTAGGGTGGAAACTGCTGGTGGTCACATTCTTGAATGGGGTGGTGTGGCTCGGATAAACGGTCAGCTGGCCATTTCTCGGGCAATTGGTGATTTATCCTTTAAAAGTTATGGAGTTATATCTGCACCTGAAATAACAGATTGGCAGCATTTAACTGCCAATGATAGCTATCTAATCGCAGCATCTGATGGCCTTTTTGAGAGGCTTAGCTTGGAAGACGTTTGTGACTTGCTCTGGGAGGTCCAGAATAAACTTCCAATACCATCAGGACTTTCTTCTTCGTGTGCATACTCTTTAGCTGATTGTATAGTAACCGCCGCCTTAGAGAGGGGCAGTACGGATAATGTTGCAGCTGTTGTGGTTCCTTTAGCGTCTCTTGGTTTATCTCAAGACTTGGCAAAGGATATCTTTCTTGGGGAGGAAGGCATTGATAATCCAACATTGTGTTTGCAGAATTTGATTTCTGAATATTCAGTACGATCGGAGCATGCTCGTCCAATTGTGACAAAGTTTGAGAGATTATTGGTAGAAAAAAAACACAGAACACCTAGGTGTTTTTATCTGTACGAGAATCTTGATGAATTTGTGGATTACACTCTGCAAAATGATACATATGAGAATGCAAGTTATGTCGATGATCTGCCCCATGCTCGCCCTGAGACCCTTGGCCTTGATCAGCATTATGGTGGAGTTGTAAATTTGTATAATCACCAGAGTTTCTGCTTGAACCTTGAGAAGACTGGTTGGGGAGCGAGGCAACAATGTTCAAATTCTGAAGTACTAATTAATTTCTTTAGTTTGATAGAGTCAATTCCTTTTCATGGTTCAGAATATGAATATTCAGTTCCCGACTTGAGGTACATACTCAAGAAGAGGTTTGGTCATGGATCGTATGGTGAAGTATGGTTGGCGTTTCATTGGAATTGTGGTCAAGGAAGAAACTCTTTAAATTGGATTAACAAAAATAGTAGCTTATCTGCTCATAATTGTGAAGATAGTCCTCCAGAGGATAATTTATTCATTTTGAAACGGATAATGGTTGAGAGAGGGACTGTGGTATACTTAAGTGGTCTTCGAGAGAAGTACTTTGGGGAAATGTTTTTGAATGCATCTACATGCTTAGGTGGTGTTCAAGCAGATGACATAGTGAACTCTGTTTTGGAAAAATCGTACTTGGATTTGGATGACATAATCGAGAATAACAAATCACAGATTCATGAGATGGGAAACATTTTCTCAAATAACTTTCGAAGAAGTCCTGTCTATGAAGAAGGTTTAGACCATATTGTAAGATATGTGGAATCCTTTGAATCTCAATCTAATCAACTATGGCTTGTATTTCGCCATGAGGGAACTTCATTATCCAAACTTATGTATACTGTTGAAGAGCTTGAAGGTAATAGTGATGAAGATAACATTGAAAAGAAAAAACATGTTCAGATTCTCCGTCCTTCTAAATGGTGGCACTGGTTAAAAACAACTGAGGCAGGAAAAGAGGAAATGCGAAATCTCATATGGCAGTTGTTGAAGGCACTCAAGGCTTGTCATGACCGCACTATCATCCACAGGGATATCAAGCCTGAGAACATGGTTATATGCTTTCAAGATCAAGACTCTGGGAAATGCATGAAGGGAAATCCAAGTGGAGATCAGAATCTCGTAACCAAAATGCGCTTAATTGACTTTGGTAGTGCTATCGATGAGTTCACATTGAAGCATTTATATGGTTCCCATGGACCTTCAAGGGCCGAACAAACTCATGAGTACACTCCTCCTGAAGCCTTGCTAAATTCAAGTTGGTTTCTCGGACCAACAAGCACAACTCTGAAGTATGATATGTGGAGTGTTGGTGTTGTGATTTTAGAGTTGATCTTGGGATCGCCTAATGTTTTTCAAATAAGCGCTCTAACTCAAACTCTTTTGGACCAACATCTTGAGGGGTGGAATGAAGACTTAAAGGAGCTTGCTTACAAGCTGAGATCATTCATGGAATTATGCATCTTAATTCCAACGAGTTCAAGAAAAAGTTATCAACCCATGTACAATCTGGGAGGATCGCCAGCTTCCTGGAGGTGCTCAGAAGAAGTCTTTTCCCATCATATTAGAAGTAGAGATCCTCTTAAACTAGGGTTTCCAAATGTTTCCACTTTACGATTAGTTCGCCAGCTTTTACTCTGGGATCCGGAAGATCGACTTAGTGTGGACAAGGCTTTACAGCATCCATATTTCCAACCACCTCCTAATGGATGA 3189 41.05 MTVNRTLKLILLGILLSIPICRGESSTCLTIYKEGGAPAVFQSPKCPRWKLPNYFSRPPTSARCQSALRLGRRKSQEDRTLCALDIRIPFPVMAGFKEVVVGIVAVFDGHNGAEASEMASKFLLEYFLLHTYFLLDSTYSAVFKKSTRKLSYQGGHETIFQMFNGDKELHHQESDIGRFKYSLPAGSDDHFHLEILKEALLRAIHDIDATFSKASSNYNLNSGSTATVILMADDQILVANIGDSKGFLCSETFQSPAEAKATILRLYMQKRQSGTLSRLRGYGNSKTLTSNGMNFLSVKELTRDHHPDRDDERSRVETAGGHILEWGGVARINGQLAISRAIGDLSFKSYGVISAPEITDWQHLTANDSYLIAASDGLFERLSLEDVCDLLWEVQNKLPIPSGLSSSCAYSLADCIVTAALERGSTDNVAAVVVPLASLGLSQDLAKDIFLGEEGIDNPTLCLQNLISEYSVRSEHARPIVTKFERLLVEKKHRTPRCFYLYENLDEFVDYTLQNDTYENASYVDDLPHARPETLGLDQHYGGVVNLYNHQSFCLNLEKTGWGARQQCSNSEVLINFFSLIESIPFHGSEYEYSVPDLRYILKKRFGHGSYGEVWLAFHWNCGQGRNSLNWINKNSSLSAHNCEDSPPEDNLFILKRIMVERGTVVYLSGLREKYFGEMFLNASTCLGGVQADDIVNSVLEKSYLDLDDIIENNKSQIHEMGNIFSNNFRRSPVYEEGLDHIVRYVESFESQSNQLWLVFRHEGTSLSKLMYTVEELEGNSDEDNIEKKKHVQILRPSKWWHWLKTTEAGKEEMRNLIWQLLKALKACHDRTIIHRDIKPENMVICFQDQDSGKCMKGNPSGDQNLVTKMRLIDFGSAIDEFTLKHLYGSHGPSRAEQTHEYTPPEALLNSSWFLGPTSTTLKYDMWSVGVVILELILGSPNVFQISALTQTLLDQHLEGWNEDLKELAYKLRSFMELCILIPTSSRKSYQPMYNLGGSPASWRCSEEVFSHHIRSRDPLKLGFPNVSTLRLVRQLLLWDPEDRLSVDKALQHPYFQPPPNG 1062
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4505268 4517508 - BLOR15338 Blo05g00376 60810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00376 1062 ProSiteProfiles PPM-type phosphatase domain profile. 63 436 IPR001932 -
Blo05g00376 1062 Gene3D - 61 439 IPR036457 -
Blo05g00376 1062 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 15 591 - -
Blo05g00376 1062 Pfam Protein phosphatase 2C 201 251 IPR001932 -
Blo05g00376 1062 Pfam Protein phosphatase 2C 293 429 IPR001932 -
Blo05g00376 1062 CDD PP2Cc 63 436 IPR001932 -
Blo05g00376 1062 SMART PP2C_4 55 434 IPR001932 -
Blo05g00376 1062 PANTHER ALPHABET, ISOFORM E-RELATED 15 591 - -
Blo05g00376 1062 ProSiteProfiles Protein kinase domain profile. 600 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00376 1062 SUPERFAMILY Protein kinase-like (PK-like) 599 1058 IPR011009 -
Blo05g00376 1062 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Blo05g00376 1062 Pfam Protein kinase domain 795 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00376 1062 Gene3D Transferase(Phosphotransferase) domain 1 798 1057 - -
Blo05g00376 1062 SMART serkin_6 600 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00376 1062 SUPERFAMILY PP2C-like 57 437 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00376 Blo-Chr5:4505268 Blo02g01149 Blo-Chr2:43050708 8.97E-24 dispersed
Blo05g00376 Blo-Chr5:4505268 Blo01g01427 Blo-Chr1:53080047 6.69E-23 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84292 PF00069 Pkinase 2.30E-27 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00376 - - qsu:112001119 1379.77