Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00383 ATGGCGAATAATCCGTATGAGGCCCAGACCGACGATTTCTTAGAGCAAATTCTTAGTGGTCCTGCTTTCGCGTCGAATGACTCAGGCTTGGCAGGAAATGATGGTGGATTCTCAGGCTTGGGAGGAAATGATGGGGGATTGTCCGGGGACGGCTCTTGCCACTCGGCCAGCGTTGGTGGAGGAAGCGATGGGGGCGCAGGGTTTCGTAGTCCTGGTTTTCCCTTGGGGTTGAGCTTGGAGCAGGGAAAGTGTGGGTATCTGAAGCCTGAGGAGGCATTCGGTAGCGGCCCGCGGTTCTGCGGCGGGGTCGTTGATAGCAGAGCTTCATCCATAAAAACTGTTTTCCAAGGCCAACCAATTACCACCAATGTTAACGGAGCGCCACATCTTCCAGTAATGCGGCCAAGAGTTCGAGCTAAACGAGGACATGCTACAGATCCCCACAGTATTGCTGAGAGGTTACGCAGAGAAAGAATTACAGAGAGAATCAGGGCATTGCAGGAACTGGTTCCTAGTGCAAATAAGACAAATAAAGCTGCCATGCTCGATGAAATAGCAGATTATGTGAAGTTCCTGCGACTCCAAGTGAAGGTTTTAAGCATAAGTAGACTGGGAGGTGCTGGGGCCGTAGCACCTCTTGTGACGGACATTTCATTATTATCACTTGAGGAAAACGGAAGTGGAGGTGGAAGAAACCGACCTGCCTGGGAAACGTGGTCAGATGATTGCACAGAAAGACAAGTTGCCAAGTTAATGGAAGAAAATGTCGGTGCTGCTATGCAATTTCTTCAATCCAAGGCCCTTTGTCTCATGCCAATCTCTTTAGCCTCCGCAATCGGCCACACCCAGCCAGCTGACTCCGGCAGTGTGGCCCACGACAAAGGTACAGTTTCTAGTAAGAAGAAAAAGAAGCAAAATTGCAATGTGCCATTTGTTGTTATCAGAGTCTCTGTTTGTCCATCACTTTTGGTTAAGAAAGACCGAGGACGACCTACTAACCCAAAGGCAAGGCCAAAAGCGTATGGGGAAATCAGCGCAGTCAGCGATGTCTCTGGTGTTGTTGAAATGTTGCAAGATGACAGTGACAAGACTGATGAAGACGATGAATCAGAGGAACACAATGCTGTTGCTGAAGACAGAGATGGAGATTATAGTACCGACACCAGTGATGACAATGAATATGATGGAGAAGGAAGAAGCAAAAATTGCTATGATTCAGCATGGTTCGATGCAAAGCCAACAGCTTTTAAGATTCCAATTGTGTTGAATGGATGCTTCATTATTGCCATGGCTCTGCCCTGCCCTGCCCAGCTTAGCAAGTTTAGTTTTTTTGTGCAGACTGGAGGTATGAGCAACAGGCAGAAGCATAGCAGCGATCAGGCAAACGCTTCCAGCCTGGAAAAGAAGAAGAAGAAGAAGAAGCCTGTGACTGCAGCAGTGCTTGCTGCTCCGGCGATGGCAGAGGCCTCAACAGTCAACGGCTGTGTCGCCGCTGCTGGGTTCTGA 1506 49.0 MANNPYEAQTDDFLEQILSGPAFASNDSGLAGNDGGFSGLGGNDGGLSGDGSCHSASVGGGSDGGAGFRSPGFPLGLSLEQGKCGYLKPEEAFGSGPRFCGGVVDSRASSIKTVFQGQPITTNVNGAPHLPVMRPRVRAKRGHATDPHSIAERLRRERITERIRALQELVPSANKTNKAAMLDEIADYVKFLRLQVKVLSISRLGGAGAVAPLVTDISLLSLEENGSGGGRNRPAWETWSDDCTERQVAKLMEENVGAAMQFLQSKALCLMPISLASAIGHTQPADSGSVAHDKGTVSSKKKKKQNCNVPFVVIRVSVCPSLLVKKDRGRPTNPKARPKAYGEISAVSDVSGVVEMLQDDSDKTDEDDESEEHNAVAEDRDGDYSTDTSDDNEYDGEGRSKNCYDSAWFDAKPTAFKIPIVLNGCFIIAMALPCPAQLSKFSFFVQTGGMSNRQKHSSDQANASSLEKKKKKKKPVTAAVLAAPAMAEASTVNGCVAAAGF 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4703893 4710242 + BLOR15345 Blo05g00383 60817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00383 501 Pfam Helix-loop-helix DNA-binding domain 148 192 IPR011598 GO:0046983
Blo05g00383 501 MobiDBLite consensus disorder prediction 360 374 - -
Blo05g00383 501 MobiDBLite consensus disorder prediction 359 397 - -
Blo05g00383 501 MobiDBLite consensus disorder prediction 282 302 - -
Blo05g00383 501 MobiDBLite consensus disorder prediction 451 471 - -
Blo05g00383 501 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 201 IPR036638 GO:0046983
Blo05g00383 501 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 289 - -
Blo05g00383 501 Gene3D - 145 203 IPR036638 GO:0046983
Blo05g00383 501 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 192 IPR011598 GO:0046983
Blo05g00383 501 SMART finulus 149 198 IPR011598 GO:0046983
Blo05g00383 501 PANTHER TRANSCRIPTION FACTOR UNE12 ISOFORM X1 7 289 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00383 Blo-Chr5:4703893 Blo10g00307 Blo-Chr10:4652003 1.96E-68 dispersed
Blo01g00379 Blo-Chr1:4353969 Blo05g00383 Blo-Chr5:4703893 1.34E-24 transposed
Blo11g00461 Blo-Chr11:4099125 Blo05g00383 Blo-Chr5:4703893 1.26E-38 wgd
Blo05g00383 Blo-Chr5:4703893 Blo06g00431 Blo-Chr6:24748108 1.15E-146 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12396 PF05285 SDA1 2.30E-10 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00383 - - fve:101296912 371.318