Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00409 ATGGAAAAGAATTTTTGGGAAAGTTCCAGCTTTACGACCCATATACAGCAGATCTCTGGAATTCAAAAGCAATCAGCGTCTAGCAATCATGTAAAGGATAGGAAGAGAAAGCTGAAAACAAGTCCGAAATGTAAGCTTAAAAGTAATAGATCTTGCAAGACTACTGATGAGAGCTGTGATATTGAAGACAAAGACATCAAATCAGACCTGGGTCCAGAATTTACACTGGAATCCTTTAAAAAATACGCAGATGATTTCAAGAGTCAGTATTTTTCGGAAAGAGATAAGCTTCAGCAAACTTCATCTCTAGAAAATTGTTATCGGACAACAATAAGCATAGAGGCTGAATACTACCAAGTTGTTGAAAATCTAACCAAAGAACTCAAGGTGTTTTCTGGTAGTAATCTCAACAGCAGAGTATTTGGATCTGGATTTCCAATGGTTTCACGCTGTGTGGATGGAACAAGTTCTAATGATCACATGGATTCTGGTTGGAATCTGAATAATTTATCCAGACTGCCTGGTTCACTCCTATCATTTGAAAGCTATGATACCTGTGCTATTTTACTACCTCGAGTGGATGTAGGAATGTGCTTTTCATCACGCGATTGGCAAGTTGAGGAACACCATTTACCCATGTTGTCTTACATGCACTTGGGAGATCCTAAAATATGGTATTGTGTTCCCGATAGATTCAGTGTTCAGTTCGAGGAGGTTGTAAAGGAGAGATTCACGGATTTATTTGCAGAACAGAATGCGAAGCATTATGCACCAGTAAAACAGCTATCAGCATATGCATTGGAATCAGAGGGTATACCAGTGTATCGATGCACTCAGTTTTCTGGAGAGTTTGTTCTCATCTTCCCAGGATCATACAGCTCGATATTGAATTGCGGCTTTAATTGTGCAGAGGAAGCCTATTTTGCCCCTCTTTGCTGGTTACCTCATGGACAAAAAATTGTGGAGCTTTACTCTGTGAAACAGAGAAAGACATCCATGTCCCATGATAAGCTGCTGCTAGGTGCAGCTATGGAGGCAGTAAAGGCACAATGGGTACTTACACTTTGTAGAAAGAACTCCATAGAAAGCTTGAGATGGAAAGATGCTTGCGGAAAGGACAGGGTGTTAGCACAAGCATTGAAGTTACGATTTAATATGGAAGGTCGTAGAAGAAAATATCTTTGTGCTTCTATGCAGAAGCAGATAATGGATGAAAAGTTTGATGATAAAAGAAGACGAGAATGCAGCATATGCTTCTTCGATTTGCACTTATCCGCTGTATGGTGTCCCTGTTCTGCAGATCGATATTCATGTCTGATTCATGCGAAGCAGCTATGTTCTTGTTCTTGGTTTAAGAAAACTTTGCTTGTGAGGCATGAAATGACGGACTTATATCTTCTTGTTGAAGCCGTTGAAGGGAAATTGAGTGCTGTCTATAAATGGGCTAAAGAGAATGTTGGACTTACTCTTCATTCCCAATCATCCAAGTCCCTGCAATCAAATTCACCATATTTCAGTAATAGCTCTGTTGCTACAATCAAGGCAGAATTAAAGGCTCGACTTATCAAATCCAAAGTGTTGAATGATTCAAATGCAAAAGAGAAAGATTCAGTGTATGAATTGGAGAGAACTTCAAATATTGATGGAGAAAAAACTGCAAATGGGTGCCAATCAATGAGCTTGAATGAGCTCAATGGAATGGAGGATGTGGCAAAAGAGAATATAGAATCTTCGGCAGATATCATACCCTCATTACAGAGAGATTTGACGACTGAACTTTCCTGTGAAAGTACAACTAGCTCTAGTTCATCTGATTCTGACGAGGAAATGAAGGATCTTGGTTTAGGGAAGGGCCTCGAATTCACTACGCTCTTGAAAGACTCTCCCACGAGAAATGAAGAAACTGATTTTGCATTGTCATGTCAAGAAAATCGGATTGCTGAAATTCCATCTTCTGGGTCTCTAGGTGATGCTATTGTCCTTAGTGATGATGATGGATGA 2001 39.73 MEKNFWESSSFTTHIQQISGIQKQSASSNHVKDRKRKLKTSPKCKLKSNRSCKTTDESCDIEDKDIKSDLGPEFTLESFKKYADDFKSQYFSERDKLQQTSSLENCYRTTISIEAEYYQVVENLTKELKVFSGSNLNSRVFGSGFPMVSRCVDGTSSNDHMDSGWNLNNLSRLPGSLLSFESYDTCAILLPRVDVGMCFSSRDWQVEEHHLPMLSYMHLGDPKIWYCVPDRFSVQFEEVVKERFTDLFAEQNAKHYAPVKQLSAYALESEGIPVYRCTQFSGEFVLIFPGSYSSILNCGFNCAEEAYFAPLCWLPHGQKIVELYSVKQRKTSMSHDKLLLGAAMEAVKAQWVLTLCRKNSIESLRWKDACGKDRVLAQALKLRFNMEGRRRKYLCASMQKQIMDEKFDDKRRRECSICFFDLHLSAVWCPCSADRYSCLIHAKQLCSCSWFKKTLLVRHEMTDLYLLVEAVEGKLSAVYKWAKENVGLTLHSQSSKSLQSNSPYFSNSSVATIKAELKARLIKSKVLNDSNAKEKDSVYELERTSNIDGEKTANGCQSMSLNELNGMEDVAKENIESSADIIPSLQRDLTTELSCESTTSSSSSDSDEEMKDLGLGKGLEFTTLLKDSPTRNEETDFALSCQENRIAEIPSSGSLGDAIVLSDDDG 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5164814 5167760 - BLOR15371 Blo05g00409 60843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00409 666 MobiDBLite consensus disorder prediction 30 46 - -
Blo05g00409 666 MobiDBLite consensus disorder prediction 17 57 - -
Blo05g00409 666 MobiDBLite consensus disorder prediction 590 604 - -
Blo05g00409 666 Pfam C5HC2 zinc finger 415 465 IPR004198 -
Blo05g00409 666 ProSiteProfiles JmjC domain profile. 162 325 IPR003347 -
Blo05g00409 666 Pfam JmjC domain, hydroxylase 195 306 IPR003347 -
Blo05g00409 666 Gene3D Cupin 2 331 - -
Blo05g00409 666 PANTHER LYSINE-SPECIFIC DEMETHYLASE 2 586 - -
Blo05g00409 666 PANTHER INACTIVE LYSINE-SPECIFIC DEMETHYLASE JMJ19-RELATED 2 586 - -
Blo05g00409 666 SUPERFAMILY Clavaminate synthase-like 160 352 - -
Blo05g00409 666 MobiDBLite consensus disorder prediction 590 612 - -
Blo05g00409 666 SMART cupin_9 162 325 IPR003347 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo05g00409 Blo10g00272 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00409 Blo-Chr5:5164814 Blo10g00272 Blo-Chr10:3891155 2.90E-140 dispersed
Blo11g00440 Blo-Chr11:3878954 Blo05g00409 Blo-Chr5:5164814 4.10E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12400 PF02373 JmjC 1.60E-27 CL0029 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00409 - - bhj:120085977 547.354