Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00410 ATGGAAAATGAACTTTTCTTCAACGCCAGACATCCGCCGCCGTCTCCGATCGCGTTTGAATCAACTTCTGAGATGTCTGTTTGGCAGCAACTAGCTCCGGTGCCCAACTGCTCGCCGGAGAAATCCACGGGCTTCTTTCTCGACCCGGGTACACACTTCGATTCAGCTCTCTGTTCCGTTGTCCCTTCGCCGGAGATATCGAATTCCAATGTCTCCGGCGAAGGGCTTAGGATTAGGGAACTGATAGGGAAGCTCCGAAAAAATCCGAATTACAGTACTCCTTTGAGCTCACATCCGAAGCTTAATTCTCCATTCATGGTGGCAAATTCTAATGTAGCGGAATTCTCAGGCGATCCTGGATTTGCAGAGAGGGCGGCTAGGTTTTCTTGCTTTGGAAGTAAGAGTTTCAATGGTCGAACTTGTCAGTTTCCTTCTCGCAGATCTACACCATTAATAGCGGACGGAAAGCTTTTTCGAGTCTCGAGCAGCCCATCTCTCGAAGCATTTGGATCGACTCACCCAATGGAATCTACATTCTCAGAACAAATCTCAAACGACTTGAATTGCAGGAAAAGAAAAGCAAATTCAAAGGGAAAACCGAAAGAACTCGTTAAGGTCTGCTCCGATTCACAGTTTCCATTTTTGATCCTGAACGAAGAGAACAGGTACGGAAATTGCGGCAACAGGACAAAGGAAGAAGGCGGCCATGGAAAAAGCTGCGCAAATGAAGAGAAGACAAACAAGACCAAGAGTAACCCTAAACCTCCAGAGCCTTACAAAGACTACATTCATGTCCGAGCAAGAAGGGGCCAAGCCACTGACAGCCATAGCCTTGCAGAAAGAGTCAGGAGAGAGAAGATAAGTGAAAGAATGAGGCTTCTTCAAGATCTCGTTCCAGGCTGCGACAAAGTCACCGGAAAAGCACTAATGCTCGACGAAATAATAAACTATGTACAGTCATTGCAACGTCGAGTTGAGTTCCTTTCCATGAAGTTGGCTTCTGTCAGCACCCGGTTGGAATCCACCGTGGATTCTCCGAGCTCCAAAGAAGCATTTCAATCAAGCACTTCATTGTCAAATCCAGCATTTCCAAATGATTCTTCACCATCCACCATCTATGGACACCTTAATCTTGCCCGGCAACTACCTTTGATAAATGGAATTGGCCAGCAGTTTCAAGCGTTTGAAGATGACAGCCTGCAATCCATCGTTCAAATGGGGATTGGCCAATCTCAAAACAGAGAGACAGCGTTTCAGTGTCCATTTGCAGTCCGGCACCAGACCGGCGGTACCGGTTCTCTTTTTGGGAAGACCGGTACCGGTCCCGCAGAAGACAGGTTCCGGTACCAGTTCTGGACCGGGTTTTTCGCTACCGGTTCCTGTCCGGTACCGTGGCGATGGACAGAGGTCGGAGCTGGCAGCGGCAGTGGCGATGGACAGAGTGGGAGCTCGGAGCTAGCAGCGGCAGTGGCAGACGAACAGAACGGAGCTCGGAACTCGGAGCTCGGAGCTGGCAGTGGCAGACGAACGAAGCTCGGAACTCAGAGCTGGCAGTGGCGACTGTCGACGACGGACGGAGCTCGGAGCTGGCAGAGTGGCAGTGTCGGACTGGTGACGGTCGATGGACGGAGCTCGCTGGTCGGCGTTGGCTGGCAGAGGCTGGCTGACGAGTGA 1674 50.78 MENELFFNARHPPPSPIAFESTSEMSVWQQLAPVPNCSPEKSTGFFLDPGTHFDSALCSVVPSPEISNSNVSGEGLRIRELIGKLRKNPNYSTPLSSHPKLNSPFMVANSNVAEFSGDPGFAERAARFSCFGSKSFNGRTCQFPSRRSTPLIADGKLFRVSSSPSLEAFGSTHPMESTFSEQISNDLNCRKRKANSKGKPKELVKVCSDSQFPFLILNEENRYGNCGNRTKEEGGHGKSCANEEKTNKTKSNPKPPEPYKDYIHVRARRGQATDSHSLAERVRREKISERMRLLQDLVPGCDKVTGKALMLDEIINYVQSLQRRVEFLSMKLASVSTRLESTVDSPSSKEAFQSSTSLSNPAFPNDSSPSTIYGHLNLARQLPLINGIGQQFQAFEDDSLQSIVQMGIGQSQNRETAFQCPFAVRHQTGGTGSLFGKTGTGPAEDRFRYQFWTGFFATGSCPVPWRWTEVGAGSGSGDGQSGSSELAAAVADEQNGARNSELGAGSGRRTKLGTQSWQWRLSTTDGARSWQSGSVGLVTVDGRSSLVGVGWQRLADE 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5195203 5206683 + BLOR15372 Blo05g00410 60844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00410 557 MobiDBLite consensus disorder prediction 472 516 - -
Blo05g00410 557 Gene3D - 268 344 IPR036638 GO:0046983
Blo05g00410 557 PANTHER BHLH TRANSCRIPTION FACTOR 33 85 - -
Blo05g00410 557 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 33 85 IPR024097 GO:0006355
Blo05g00410 557 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 269 337 IPR036638 GO:0046983
Blo05g00410 557 MobiDBLite consensus disorder prediction 228 260 - -
Blo05g00410 557 MobiDBLite consensus disorder prediction 338 364 - -
Blo05g00410 557 SMART finulus 277 327 IPR011598 GO:0046983
Blo05g00410 557 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 182 382 IPR024097 GO:0006355
Blo05g00410 557 PANTHER BHLH TRANSCRIPTION FACTOR 182 382 - -
Blo05g00410 557 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 271 321 IPR011598 GO:0046983
Blo05g00410 557 Pfam Helix-loop-helix DNA-binding domain 275 322 IPR011598 GO:0046983
Blo05g00410 557 CDD bHLH_AtBPE_like 261 345 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00410 Blo-Chr5:5195203 Blo07g00067 Blo-Chr7:975466 1.74E-76 dispersed
Blo19g00230 Blo-Chr19:11442973 Blo05g00410 Blo-Chr5:5195203 1.76E-51 transposed
Blo05g00410 Blo-Chr5:5195203 Blo06g00398 Blo-Chr6:23064680 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12401 PF00010 HLH 1.30E-05 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00410 - - zju:107426586 375.17