Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00537 ATGCCTGCTTGGTTTGGGAAAAAATCCACCAAGAAGAGTAAAGAGCAGCCAAACCAGCTTCAGGGGAAAGACTTGCGCAGCAGCCCCATCAAATTTTCAAACTCTTCCATAAAAATAGACCAGAAATCGAGAGATAATCCCAAGAATTTTGACGAAGCTTCCGCCGTGTCTGTCTCCCATAAATCGCCGAGGTCCAGCAGGGATCTCGGATTTTCAGGCGGCGGCGCTTGTGGGTCTGCTGGATTTTCTGGTTTTGACTCCGATAGCTCGGACAGGAAGGGTCATCCTCTTCCTCAGCCATCGATTTCTACAACGCATAACTTTGTGGTGGATCATGGGGTCGGGATTGCATCTGGGTCGGTTTCGAGTGTTAGTTCTTCGGGGTCTTTCGATGATCGTTCGATTGCTCAAAGTCATGGCTGCCAATTTGTTGCGTACAGAAGTTTTGGAACGGGATCAAGAGGGCCGACCAGCCCTACCTCCCCTCTTAACTCTCGGCTATGCGGGTTCAGCGTGGAATCTCCAACCGGCAAGGTTGAAGATGGGAAGAACCAATGCCATCGTTTGCCACTCCCACCGAGCTCTCCGACCAACCCTTCTGCATTGCCTAACTTCAGACCAGTTGGAGCTGCTGAAAACTCTCCCTCCCAGCCTTGTTGGAAGAAGGGTCGGCTTCTAGGACGCGGAACTTTTGGACATGTTTACCTCGGATTCAATAGTGTAAGTGGGCAACTGTGTGCAATAAAGGAAGTCAAGGTCATTGGCGATGACTCGACATCGATAGAATCCCTCAAGCAACTGAACCAGGAGATAAATTTGCTTAGCCAGCTTTCACACCCAAACATTGTTCGATATTATGGAAGTGAAATGGGCGATGAAACACTCTCGGTTTATTTAGAATATGTCTCGGGTGGCTCGATCTACAAATTACTTCAAGAATATGGAGCATTCAAGGAACCTGTAATACAGAATTATACGAGGAAAATCGTTGCTGGACTCGCATATCTCCATGCAAGAAATACGGTGCACAGGGACATCAAAGGGGCTAACATATTAGTAGATCCCAATGGTGAGATCAAGTTGGCAGACTTTGGCATGGCAAAACATATAAACAGCTCCAATTCAATGCTGTCTTTCAAAGGAAGTCCTCATTGGATGGCACCAGAGGTCGTGATGAACACTAATGGCTACAATCTTGCGGTGGATGTTTGGAGCTTGGGTTGTACGGTTCTCGAAATGGCAACCTCGAAACCGCCTTGGAGCAAGTACGAAGGGGTGGCTGCCATATTTAAAATAGGGAACACCAAAGAGATTCCCGAAATTCCCGACCATCTCTCAAACGATGCAAAAAGTTTCATCAGACTCTGCCTTCAACGGGACCCTTCCACACGCCCAACAGCCGCACAATTACTAGAACACCCTTTTGTTTGTGACCAATTCTCACCAAGAGTTTCTGTTATTGATGTTTTCCCCTTCGCCTTCGATGGAAGCCATACACCCCCAAGATTAGATCATCATGCTAATAGGAAAAGTATTAGCACGTGTGACGGAGAATACATGCAAAGACCTCTAGTAACGACAGCACGAACGAGTGAAAATATAAGATTGATCACATCGCTACCTGTCTCTCCATGTTCGAGCCCGTTACGGCAGCGTGGACATGAACAAAGAAGCTTCTTACGTTCACCTCCACGAGCATCTTACACTGCGATGATGGAGCAGAATGGTTATTCTTATCGGAACGACTTCTCACCACAAGCGACAAGGCCGAACGCAATGCACAATCTGGATCCTACCCCTCTAATCAGAGTCCATACGCCTGGAGGATCTCCGAGGTCAAGACCTATTTAA 1851 47.43 MPAWFGKKSTKKSKEQPNQLQGKDLRSSPIKFSNSSIKIDQKSRDNPKNFDEASAVSVSHKSPRSSRDLGFSGGGACGSAGFSGFDSDSSDRKGHPLPQPSISTTHNFVVDHGVGIASGSVSSVSSSGSFDDRSIAQSHGCQFVAYRSFGTGSRGPTSPTSPLNSRLCGFSVESPTGKVEDGKNQCHRLPLPPSSPTNPSALPNFRPVGAAENSPSQPCWKKGRLLGRGTFGHVYLGFNSVSGQLCAIKEVKVIGDDSTSIESLKQLNQEINLLSQLSHPNIVRYYGSEMGDETLSVYLEYVSGGSIYKLLQEYGAFKEPVIQNYTRKIVAGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSNSMLSFKGSPHWMAPEVVMNTNGYNLAVDVWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNTKEIPEIPDHLSNDAKSFIRLCLQRDPSTRPTAAQLLEHPFVCDQFSPRVSVIDVFPFAFDGSHTPPRLDHHANRKSISTCDGEYMQRPLVTTARTSENIRLITSLPVSPCSSPLRQRGHEQRSFLRSPPRASYTAMMEQNGYSYRNDFSPQATRPNAMHNLDPTPLIRVHTPGGSPRSRPI 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10594709 10599090 - BLOR15499 Blo05g00537 60971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00537 616 Pfam Protein kinase domain 221 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00537 616 MobiDBLite consensus disorder prediction 1 105 - -
Blo05g00537 616 CDD STKc_MEKK1_plant 220 476 - -
Blo05g00537 616 ProSiteProfiles Protein kinase domain profile. 220 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00537 616 ProSitePatterns Protein kinases ATP-binding region signature. 226 249 IPR017441 GO:0005524
Blo05g00537 616 MobiDBLite consensus disorder prediction 50 66 - -
Blo05g00537 616 SMART serkin_6 220 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00537 616 Gene3D Transferase(Phosphotransferase) domain 1 219 492 - -
Blo05g00537 616 MobiDBLite consensus disorder prediction 593 616 - -
Blo05g00537 616 MobiDBLite consensus disorder prediction 20 40 - -
Blo05g00537 616 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 597 - -
Blo05g00537 616 SUPERFAMILY Protein kinase-like (PK-like) 220 560 IPR011009 -
Blo05g00537 616 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 597 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00955 Blo05g00537 CCT
Blo05g00537 Blo06g00191 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00537 Blo-Chr5:10594709 Blo09g00076 Blo-Chr9:1371274 5.20E-138 dispersed
Blo18g00199 Blo-Chr18:1953006 Blo05g00537 Blo-Chr5:10594709 5.96E-79 dispersed
Blo04g00955 Blo-Chr4:11630212 Blo05g00537 Blo-Chr5:10594709 2.08E-159 transposed
Blo11g00938 Blo-Chr11:20080166 Blo05g00537 Blo-Chr5:10594709 3.95E-80 transposed
Blo05g00537 Blo-Chr5:10594709 Blo06g00191 Blo-Chr6:8052247 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84296 PF00069 Pkinase 6.30E-73 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00537 K04421 - cpap:110816131 729.554