Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00557 ATGGTGTTTTCTGGTTCGGAAGAAGACGGGGCTTGCCCTGCAGAGCCTCCGGATCCTGACATTGTGGAATTTGACCCAACTTGCCGCTATATTAGGTACAAAGATGTGCTTGGAAAAGGTGCTTTCAAGACAGTGTATCCTGTATTTTCTTTACATGATTTAGTAGGATTTTGGTTTCCATTTAATAAGTTTTGGTTAGTTGGACTTGATGTTTTCAGCATTCCATACAAAGCATTTGATGAAGTAAATGGACTTGAAGTGGCGTGGAACCAAGTTCAAATCGATGAGGTTCTACAGTCTCCAGATGACTTAGAAAGGCTATACTCAGAAGTGCACCTCTTAAAGTCCTTGAAGCATAACAACATTGTGAGATTTTACAATTCATGGATCGATGATAAAGACAAGACCGTTAATATTATAACCGAGTTGTTCACATCTGGAAGCCTCAGACAGTATTGTAAGAAACACAAAAAGGTTGACATGAAGGCAGTGAAGGGATGGGCAAGACAGATTCTGATGGGTTTGAACTACCTCCATAGTCATAATCCACCAATTATGCACAGGGACCTGAAGTGCGATAACATATTTATCAACGGTAATCAAGGGGAAGTAAAGATTGGTGATCTTGGGATGGCAACTATTATGCAGCACGGAACTGCTAAAAGTGTAATTGGTACACCTGAGTTTATGGCTCCTGAACTTTATGATGAAAATTACAATGAGTTGGCTGATATTTATTCTTTTGGGATGTGTATGCTGGAGATGGTGACTTTTGAATACCCTTATAGCGAGTGCAGAAACTCAGCTCAAATATACAAGAAGGTTACTTCGGGTATAAAGCCTGCTGCTCTCTCTAAAGTGAAAGATCCAGATATGAAGCAATTTATAGAAAAGTGTTTAGTTCCGGCATCTGAAAGATCTTCTGCGAAGGAACTTCTAGTGGATCCTTTTCTTCAAGCTAATGGATCAGCAAAATTTCGTCCTCTGCCACTCCCAGATATCGTTCTTCCCAAGTTTGGAACCTTTGGAGATCGTTGTCTTATGTCGGAAGGACCTGCAACTTCACGAAATGCACCAACTTCCATGGATGTAAAAAACGAGGGCGAGCCACCCATCATCACTTCTTTTGACACTTCAGTTGATGGGGATTCCCATTCTCTGTCTGTGGAGGTTAAAAGGACAAAGAGGGGCAATGTCTTCTTGTTGAAAGGGGAGCGAAACGATGAGAACTCTATCTCTCTGATACTTCAGATAGCAGATCAAAATGGTCGTGCTCGAAATATCCATTTTATATTCTACCTCGACAGTGACACAGCACTCTCTCTTTCAAGTGAAATGGTGGAACAGCTTGAGCTGCCTGACCAAAATGTTATGCTCGTAGCAGAATTGATTGATTTGCTGCTAGTAAACTTAGTTCCCAGTTGGAAACCTTGTGTTCGCATGGAGCATTTGGTCCCTGAAAATGGAATAAGAGCTTCAAAAGGCAATGGAAAGGATTTTCCATCGCAAAAACAAAAGGATGAAAACGCATTGAGATTGAAGGCACATGAGCCTGTAAATCCTTTATCCTCACTAGGCCTCCCCAATTCTTCCTCGCCGGATGCATTAAGTCAAGCAATACAAGAAAAGTTGGAGAATCCTAAATCCGATCTTATTAGATCTCATTCGTACTGTTGCTTACAGGGCGAAACAACGACAGATGATAGATTTTCCGAAATGTCTTATGTTTCCGCAACCTCTAATGAGTGCAGCGAGAGGAACTGGTCAGTCGATTCATTCATGTCGGTTGAATCTGGATTGATGGATTCCAATCGATGCGGATCGCAAAGAGCATCAGGGGTCATAACTCCATATTTGACCGAAATGGGTGGATTGCCCGACATCAAGAACAGGGTATTGGAAATTGGAAGGAATAACTTGCTTTCCTGCCGTGGTTTTCCGACTGATGGCTCGTGCTTGTCCGATCAGGTGGAAGACGAGATGAGAACTGAGTTGGAGACAATTGAACTGCAGTTCCAGGAGGCAATGAGGGAGATGTGCAAGAAAAGACACGAAGCGATAATGGAGGCAAGAAAAAGGTTAGAGAAGAAAAATATAGAGACGTTTTCTTAG 2112 42.05 MVFSGSEEDGACPAEPPDPDIVEFDPTCRYIRYKDVLGKGAFKTVYPVFSLHDLVGFWFPFNKFWLVGLDVFSIPYKAFDEVNGLEVAWNQVQIDEVLQSPDDLERLYSEVHLLKSLKHNNIVRFYNSWIDDKDKTVNIITELFTSGSLRQYCKKHKKVDMKAVKGWARQILMGLNYLHSHNPPIMHRDLKCDNIFINGNQGEVKIGDLGMATIMQHGTAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVTSGIKPAALSKVKDPDMKQFIEKCLVPASERSSAKELLVDPFLQANGSAKFRPLPLPDIVLPKFGTFGDRCLMSEGPATSRNAPTSMDVKNEGEPPIITSFDTSVDGDSHSLSVEVKRTKRGNVFLLKGERNDENSISLILQIADQNGRARNIHFIFYLDSDTALSLSSEMVEQLELPDQNVMLVAELIDLLLVNLVPSWKPCVRMEHLVPENGIRASKGNGKDFPSQKQKDENALRLKAHEPVNPLSSLGLPNSSSPDALSQAIQEKLENPKSDLIRSHSYCCLQGETTTDDRFSEMSYVSATSNECSERNWSVDSFMSVESGLMDSNRCGSQRASGVITPYLTEMGGLPDIKNRVLEIGRNNLLSCRGFPTDGSCLSDQVEDEMRTELETIELQFQEAMREMCKKRHEAIMEARKRLEKKNIETFS 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11962746 11965708 + BLOR15519 Blo05g00557 60991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00557 703 SUPERFAMILY Protein kinase-like (PK-like) 35 369 IPR011009 -
Blo05g00557 703 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 50 - -
Blo05g00557 703 Gene3D Phosphorylase Kinase; domain 1 16 142 - -
Blo05g00557 703 CDD STKc_WNK 29 318 - -
Blo05g00557 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Blo05g00557 703 ProSiteProfiles Protein kinase domain profile. 31 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00557 703 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 67 700 - -
Blo05g00557 703 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 67 700 - -
Blo05g00557 703 Coils Coil 658 697 - -
Blo05g00557 703 Pfam Protein kinase domain 71 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00557 703 Gene3D Transferase(Phosphotransferase) domain 1 144 326 - -
Blo05g00557 703 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 50 - -
Blo05g00557 703 SMART serkin_6 31 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00315 Blo-Chr2:3192925 Blo05g00557 Blo-Chr5:11962746 0 dispersed
Blo05g00557 Blo-Chr5:11962746 Blo16g00483 Blo-Chr16:19050196 0 dispersed
Blo05g00557 Blo-Chr5:11962746 Blo06g00213 Blo-Chr6:9624151 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84298 PF00069 Pkinase 1.70E-49 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00557 K08867 - qsu:112016416 823.542