Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00602 ATGTTTCTTCCGCTTATAATTACAATTTTTATAGTCTCTGCAACTACCGTTGAATGCGCAAATTCAACGAGCTGCAAAAGCGGAAAATCAGCAAAACCTGTTCCCTATCCGTTTGGATTCACTCAATCGAACTTAATCCGATTAGATTGCAGCGAGAATGGAGATATTAAGATTGGGGAATTTGTCGTGCAGAGCTTTTCCGCTGATACTATCCTTGTAAATGTTCCTGCAGTATGCAACCGTTTAACTCATTCAGTTTTACCACTTTTTGGGAAGAACTTTTGGCCAACGAATCGCAACAATCTTATTTTCTTGGGTTGCAACCACACTGGAAATTGCTCGACTGTTTCAACTTTCTTACCCAACCAATTTCTGTCGGCCGGCTGCGATTGGAAGAACCAAAATTTGAGTTGCTTCTTTCCGAATATGACAGGAAGAAGTTTCCTCATCTCGGAATGGAACCCGAATCAGTGCCAGTTCCTCGTCTCATCAATTACCATCTACTCAGAGTTGAACTCAACAGTTTTGCTCACCTTTCAGACCATTGAATTACAGTGGTGGCTCGAAGGAACCTGCAAATGCTCAAAGAACGCATTTCTTTTTGACATTTCACTTCCAACAGGGAATTTTGGGTGCCGATGCCAGTGCCGAGAAGGGTATGTAGGAGATGGCTATGCTGCCGGCGAGGGTTGCCGGAGGATAGATACTGGTTGCGATGCTCAGGGCATGTCTGAAGAATGTGGAGGAAAAATTAGCGTTGGGGTAATAGTTGGAGTTTCATTACAATATGTAAAGAGGTATTACTTTTACTTCAAAGTAAAATTCAAAGCTATGCCAACTAACTACATACACACATTCTTAGGTATAATGGCTTGTGCTTTTCTAATGGCTGGTCTTGCCCTCGTTTGTTATTTGATCCGACGGCGGGCTGCTTGTATGAAAAATCGAATGAGTGCCAAGCGACTTGTGTCCGAAGCAGCTCGGAACTCCACTGTTCCTGTTTACTCCTTAAAGGAGATAGAGCGAGCCACTAATGGCTTCTCTGAGGAACAAAGGCTCGGAACTGGAGCCTTTGGCACTGTTTATGCCGGAAAAATTTTTGACGACTGGGTTGCCGTAAAGAGAATCAAATACAGAGACCATAATAGCATTGACCAAGTCATGAATGAGATCCGGCTTCTTTCGTCTGTGAGCCATCCCAATCTAGTCCGCCTCTTAGGCTGCTCCATTGAGGAAGGCCAACAGATCCTTGTCTATGAGTTTATGCGAAATGGAACTTTGTCTCAGCACCTTCAAAGAGAGAAAGGACTAGGGCTTCCATGGACTACTCGCCTCACCATTGCCGCTGAAACTGCTTGTGCAATAGCGTATCTTCATTCTGCCATGCACCCGCCAATTTATCACAGAGACATTAAATCCAGCAACATTCTTTTGGACTACAACTTCAAATCAAAGGTTGCTGATTTTGGTCTTTCTAGGCTTGGCATTACTGAATCATCACACATCTCTACAGCCCCTCAAGGGACTCCAGGCTATGTTGATCCACAGTACCATCAGAATTTTCATCTTTCGGATAAAAGTGATGTTTACAGTTTCGGAGTTGTTCTTTTAGAGATCATTACTGCCATGAAAGTGGTTGATTTTACCCGGCCTCAAGGCGATGTGACATTAGCTGCACTTGCCATCGATCGGATTGGCCGAGGTTGTGTGGATGAGATAATAGACCCATTCCTCGAGCCGAACAGGGATGCCTGGACGCTTTATTCTGTCCACAAGGTGGCTGAACTTGCATTTCGATGCTTGGCTTTCCACAGCGAAACAAGGCCAACTATGATGGAAGTGGCAGAAGAGCTCGAAACAATCAAGCACAGTGGGTGGGCAACACTGGAAGAAACTATATGCGTAGCATCGTCAGTGGGTTCCACATGTTCATCACCACGTAATGGAAGTGAAAAATCAACGAGTGGATCGATGGTTAAGAGGACTGGATTAGGGGGTCAGATCTCGATCGTCCCACCGCAAAACTACAATCACAATTTCTCTCGGGCTTCGATGGAAGAGGTTACAGATAGCTCTGCTGTTTCTGTACAAGATCCCTGGTTTAGTGAGCAAAGCTCACCTTCAACAAATAGTTTGTTGGGTAATGTGATTCATTGA 2157 44.46 MFLPLIITIFIVSATTVECANSTSCKSGKSAKPVPYPFGFTQSNLIRLDCSENGDIKIGEFVVQSFSADTILVNVPAVCNRLTHSVLPLFGKNFWPTNRNNLIFLGCNHTGNCSTVSTFLPNQFLSAGCDWKNQNLSCFFPNMTGRSFLISEWNPNQCQFLVSSITIYSELNSTVLLTFQTIELQWWLEGTCKCSKNAFLFDISLPTGNFGCRCQCREGYVGDGYAAGEGCRRIDTGCDAQGMSEECGGKISVGVIVGVSLQYVKRYYFYFKVKFKAMPTNYIHTFLGIMACAFLMAGLALVCYLIRRRAACMKNRMSAKRLVSEAARNSTVPVYSLKEIERATNGFSEEQRLGTGAFGTVYAGKIFDDWVAVKRIKYRDHNSIDQVMNEIRLLSSVSHPNLVRLLGCSIEEGQQILVYEFMRNGTLSQHLQREKGLGLPWTTRLTIAAETACAIAYLHSAMHPPIYHRDIKSSNILLDYNFKSKVADFGLSRLGITESSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLLEIITAMKVVDFTRPQGDVTLAALAIDRIGRGCVDEIIDPFLEPNRDAWTLYSVHKVAELAFRCLAFHSETRPTMMEVAEELETIKHSGWATLEETICVASSVGSTCSSPRNGSEKSTSGSMVKRTGLGGQISIVPPQNYNHNFSRASMEEVTDSSAVSVQDPWFSEQSSPSTNSLLGNVIH 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15498780 15502429 + BLOR15564 Blo05g00602 61036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00602 718 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 17 660 - -
Blo05g00602 718 ProSiteProfiles Protein kinase domain profile. 347 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00602 718 MobiDBLite consensus disorder prediction 699 718 - -
Blo05g00602 718 SMART serkin_6 347 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo05g00602 718 ProSitePatterns Protein kinases ATP-binding region signature. 353 374 IPR017441 GO:0005524
Blo05g00602 718 Gene3D Transferase(Phosphotransferase) domain 1 422 634 - -
Blo05g00602 718 Pfam Protein tyrosine and serine/threonine kinase 350 618 IPR001245 GO:0004672|GO:0006468
Blo05g00602 718 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 660 IPR045274 GO:0007166
Blo05g00602 718 Gene3D Phosphorylase Kinase; domain 1 307 421 - -
Blo05g00602 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Blo05g00602 718 SUPERFAMILY Protein kinase-like (PK-like) 326 620 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00602 Blo-Chr5:15498780 Blo18g00827 Blo-Chr18:24383066 0 dispersed
Blo05g00602 Blo-Chr5:15498780 Blo18g00445 Blo-Chr18:4935945 3.70E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84299 PF07714 PK_Tyr_Ser-Thr 2.90E-42 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00602 - - jre:108995358 814.683