Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00636 ATGGAATACAGAGGAGAATTCTTACCTCTTATAGACGAAAGCGAGAGAGAGAGAGTTGAGCAGCTGCAGGGATCAGCTGCAGAAAGGGGAGATGCCATTACCCAAATCAAGGAGAGAATGTCCACTCACCAAGGGCCACGTGGAAAAGTTTCCACATCTGTAGATATGGCTGTGCAACTCATGATGAGTTACAGCCCCAACTCCGATTTCTCTGCAAAAATGGAGGATTCTGCCGTTCAAGAAGCAGCTTCTGGCTTTGAGAGCGTCGAAAAGCTCATTAGGTTACTCTCCCGTGCGCAGCAAAACCAGAAGCCGGAGAATAACTCTCACTCGCCCAGCTCCAGCTCCAGGATGCCTATGGAGGTCGAGATGGACTGCACGGCCGTGGCCGATGTCGCTGTTTCTAAGTTTAAGAAAGTTATTGCTCTTTTGGGTCGAACCAGAGTCGGTCATGCCCGCTTCCGAAGAGCTCCATTTGAGCTTTCCAGTGCTGAAGTTCACTACGCAACTCCGATTCAGCAAATCCCTCCTGTCCCTAACCGTCAAAACGACTGCGTTGTAGTCACTGCTTCTAAAGGCGCCGTGATTGAGAGGAAGGACTCGTTTTCCACTGTTAATTTTTCTCAGTCCTCGACTCCTAACTCGTTTATGTCGTCGCTGACCGGAGACGCTGACGGCAAACAGCCGTCGCCGCATTCTACGTTTCAGATTACGAATCTATCTCAGGTCTCCTCCACCGGAAAACCACCTCTCTCTTCCTCTTCCTTCAAGAGAAAGTGTAGTTCCGACAACCTCGGCTCCGGGTCTGCTAAGTGCGCGGGTTCCTCGGGCCGCTGCCTCTGTTCGAAGAAAAGAAAATTGAGATTAAAGAGGGTCGTGAGGGTTAGGGCGATAAGCTTGAAGATGTCCGATATTCCACCGGACGATTACTCTTGGAGAAAATACGGACAGAAACCCATCAAAGGATCTCCACATCCAAGGGGGTACTACAAGTGCAGCAGCGTGAGAGGTTGTCCGGCCAGAAAACACGTAGAGAGAGCGTTGGATGATCCAGCAATGTTGGTCGTCACTTACGAAGGAGAACACAACCATGCTCTCTCTGTTGCAGAGCCCTCCACTCTCATTCTCGAGTCCTCATAG 1140 50.53 MEYRGEFLPLIDESERERVEQLQGSAAERGDAITQIKERMSTHQGPRGKVSTSVDMAVQLMMSYSPNSDFSAKMEDSAVQEAASGFESVEKLIRLLSRAQQNQKPENNSHSPSSSSRMPMEVEMDCTAVADVAVSKFKKVIALLGRTRVGHARFRRAPFELSSAEVHYATPIQQIPPVPNRQNDCVVVTASKGAVIERKDSFSTVNFSQSSTPNSFMSSLTGDADGKQPSPHSTFQITNLSQVSSTGKPPLSSSSFKRKCSSDNLGSGSAKCAGSSGRCLCSKKRKLRLKRVVRVRAISLKMSDIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGEHNHALSVAEPSTLILESS 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20014165 20021147 + BLOR15598 Blo05g00636 61070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00636 379 MobiDBLite consensus disorder prediction 240 259 - -
Blo05g00636 379 MobiDBLite consensus disorder prediction 98 119 - -
Blo05g00636 379 Pfam Plant zinc cluster domain 257 304 IPR018872 -
Blo05g00636 379 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 68 379 IPR044810 GO:0003700
Blo05g00636 379 ProSiteProfiles WRKY domain profile. 301 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo05g00636 379 Pfam WRKY DNA -binding domain 308 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo05g00636 379 Gene3D WRKY domain 291 367 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo05g00636 379 PANTHER - 68 379 - -
Blo05g00636 379 SUPERFAMILY WRKY DNA-binding domain 304 365 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo05g00636 379 SMART WRKY_cls 306 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo05g00636 379 MobiDBLite consensus disorder prediction 209 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00636 Blo-Chr5:20014165 Blo12g00965 Blo-Chr12:27764937 8.47E-100 dispersed
Blo05g00636 Blo-Chr5:20014165 Blo01g01339 Blo-Chr1:51012480 5.70E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12416 PF03106 WRKY 5.70E-26 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00636 - - tcc:18611185 416.772