Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00673 ATGAGTGTAGTTTATACTCTCTTCCTGCTGGTTATTTCGATTGAGAGCTTATCAAGGGGTGTCAGCACTAATGTGTCTTCCAGGCCAGATGTTGTAAATATTGGGTCTCTGTTCTCAGTTAGCTCCATGATAGGCAGAGTTGCGAAAATTGCAGTAGAAGCTGCTGTTGAAGATGTGAATGCAGATCCAGCCGTTCTGGGTGGAACAAAGCTTAAACTTACAATGATGGATTCTAATTACAGCGGATTTCTCAGCATTGTTGAGTCCTTGATGTTCATGAAGAGAGACACAATGGCGATAATCGGCCCCCAAAATTCTGTTACGGCTCACGTCATATCACACATTGCAAACGAGCTTCAGGTCCCTCTATTATCATTTTCAGCCACAGACCCCACCTTGTCCTCCCTCGAGTTTCCATTTTTCGTTAGAACTTCCCAGAACGATCAGTTTCAAATGGCTGCAATAGCTGAAATCGTTGACTACTATGAGTGGAAAGAGGTGATTGCAATCTTTGTAGATGATGACCATGGTAGAAATGGAATTTCCGCATTAGGGGACAAGCTTGCTGAAAAGCGTTGTAAAATCTCTTACAAGGCACCTTTGAGGCCCGATGCCAGCCAAGATGAGGTGACAGATGCATTGGTTAAGGTGGTTTTAACTGAGTCGAGGATCCTTGTCGTTCACACCTACGAGACAACGGGATTAGTTGTTCTTCGAGTGGCCAAAAGACTAGGAATGATGGGGGCTGGATATGTGTGGATAACAACCAATTGGTTATCTTCTCTTTTAGATACTAATTCTCCCCTTCCTGATGAGGCCATGGAAAGCATTCAAGGTGTTCTTACTTTGCGAATATACACACCAGACTCAGAACTCAAAAGAAAATTTGTTTCAAGGTGGAGCAACTTGACTAAGGGAAAAGCCGATAATGGCCCCACTGGATTGAGTACTTATGCTTTACATGCCTATGACACAGTTTGGGTGCTTGCCCTTGCAATTGATGCATTTTTTAATCATGGAGGAAATCTATCCTTCTCAAATCATTTCAAATTAAGTGGGACTGATAATTTGCATCTTGACTCTATGAGCATCTTTAATGGAGGAAAATTATTGCTTCAGAGCATTTTGGAGGTTAATATGACGGGCATTACAGGTCCATTCAGATTCACCGCAGAGAGGGACTTGATTCAACCTGCATTTGAAGTCATCAATGTTATTGGAACAGGTGTTAGGAGAGTTGGTTATTGGTCTAATTATTCGGGCTTATCTGTTTTACCTCCGGAAAGTCTTTACTCAAATCCTCCTAATCGTTCTGCTTTAAATAAAAAGCTATACAATGTGATTTGGCCTGGACAGACGACACAGAGGCCTCGTGGGTGGGTATTTCCATACAATGGGAGACATTTGAGAATTGGAGTGCCGAAACGAGTGAGCTATCTTGAGTTTGTCAGAGAAGTGGATAGTTCAGCCACATTTACTGGGTATTGCATTGATGTCTTCACTGCTGCAGTTAACTTGTTGCCTTATGATGTTCCCTATCAGTTAATTCCCTTTGGTGATGGTCGTACAAATCCGAGTGGTACTGAGCTTGTTCGATTGATCACCACTGGGGTTTTTGATGCAGCAGTAGGTGATATTGCTATTACCACGATTCGAACAAGGATGGTTGATTTCACTCAGCCATATATCGAGTCCGGGTTCGTAGTCATTGCTCGAGTGAGGGAGTCAAATTCTAATGCTTGGGCTTTTCTGAGGCCATTCACTCTAAGTATGTGGCTTGTTACTGCTGTCTTTTTCCTCATTGTTGGAGCAGTTGTTTGGATTTTGGAACATAGGAGGAATGTTCAATTCCGAGGTCCGCCCAGAAAACAAGTTATTACAATTCTATGGTTTAGTTTTTCGACTCTGTTCTTCTCCCAAAGAGAAAACACTGTCAGCACCCTCGGTCGCTTAGTGCTTCTCCTATGGTTATTTGTGGTTCTGATAATAAACTCAAGCTACACAGCGAATTTGAGTTCGATCCTCACAGTACAACAGCTTTCTTCTCCCATCAAAGGAATTGAAACTTTGGTTGCAAGCAATGACCGAATTGGCTACCAGCAGGGCTCATTTGCTAGAAATTACCTTATTGAAGAACTTGGTATTCACGAGTCCAGGTTAATTCCTCTAATATCTGCAGCAGATTATTCAAAAGCCCTGAATGATGGGCCACAGAATGGTGGTGTTGCTGCTATCATTGATGAGCGTGCGTATATAGAGCTCTTCCTTTCAACGCGGTGTGAATTCAGTATTGTCGGTCAAGAGTTCACCAAAAATGGGTGGGGATTTGCCTTTCCACGAGACTCGCCTCTGGCGATCGACATGTCAACTGCCATTTTGAAACTATCGGAAAATGGTGATCTCCAAAAGATCCATGATAAATGGCTTAGGAGAAGTGCTTGCACCTCACAAACTGCAACACATGAGGTGGAAAGGCTTCAGCTTATAAGCTTTTGGGGGCTCTTTCTTGTGTGTGGATTAGCTTGTTTGCTTTCGCTTTGTGTTTATTTCTGTCTCATGGTGCGGCAGTACAGAAAGCATTACTCCGACGAACTCGAGTCAACAGGGCAAGCCTCTCGTTCAAGCCATCTTCAGACATTTATTTCATTCGCAGATGAAAAGGAAGAAGTGGTCAAAAGCAGATACAAAAGACGGCAAATGGAAAGGGCATCCAATCGTGGAATGACTGAAGTAAATTTATCAACAAGTCTCAGCATAGGCTCATCTGGTTCAACTTCTAATGGTCCATGA 2790 42.87 MSVVYTLFLLVISIESLSRGVSTNVSSRPDVVNIGSLFSVSSMIGRVAKIAVEAAVEDVNADPAVLGGTKLKLTMMDSNYSGFLSIVESLMFMKRDTMAIIGPQNSVTAHVISHIANELQVPLLSFSATDPTLSSLEFPFFVRTSQNDQFQMAAIAEIVDYYEWKEVIAIFVDDDHGRNGISALGDKLAEKRCKISYKAPLRPDASQDEVTDALVKVVLTESRILVVHTYETTGLVVLRVAKRLGMMGAGYVWITTNWLSSLLDTNSPLPDEAMESIQGVLTLRIYTPDSELKRKFVSRWSNLTKGKADNGPTGLSTYALHAYDTVWVLALAIDAFFNHGGNLSFSNHFKLSGTDNLHLDSMSIFNGGKLLLQSILEVNMTGITGPFRFTAERDLIQPAFEVINVIGTGVRRVGYWSNYSGLSVLPPESLYSNPPNRSALNKKLYNVIWPGQTTQRPRGWVFPYNGRHLRIGVPKRVSYLEFVREVDSSATFTGYCIDVFTAAVNLLPYDVPYQLIPFGDGRTNPSGTELVRLITTGVFDAAVGDIAITTIRTRMVDFTQPYIESGFVVIARVRESNSNAWAFLRPFTLSMWLVTAVFFLIVGAVVWILEHRRNVQFRGPPRKQVITILWFSFSTLFFSQRENTVSTLGRLVLLLWLFVVLIINSSYTANLSSILTVQQLSSPIKGIETLVASNDRIGYQQGSFARNYLIEELGIHESRLIPLISAADYSKALNDGPQNGGVAAIIDERAYIELFLSTRCEFSIVGQEFTKNGWGFAFPRDSPLAIDMSTAILKLSENGDLQKIHDKWLRRSACTSQTATHEVERLQLISFWGLFLVCGLACLLSLCVYFCLMVRQYRKHYSDELESTGQASRSSHLQTFISFADEKEEVVKSRYKRRQMERASNRGMTEVNLSTSLSIGSSGSTSNGP 929
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 22078313 22082570 - BLOR15635 Blo05g00673 61107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00673 929 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 15 913 - -
Blo05g00673 929 SUPERFAMILY Periplasmic binding protein-like I 27 461 IPR028082 -
Blo05g00673 929 Gene3D - 580 711 - -
Blo05g00673 929 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Blo05g00673 929 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Blo05g00673 929 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 322 334 - -
Blo05g00673 929 CDD PBP1_GABAb_receptor_plant 33 424 IPR044440 -
Blo05g00673 929 Pfam Ligand-gated ion channel 810 842 IPR001320 GO:0015276|GO:0016020
Blo05g00673 929 Gene3D - 50 397 - -
Blo05g00673 929 CDD GluR_Plant 469 809 - -
Blo05g00673 929 Pfam Receptor family ligand binding region 50 407 IPR001828 -
Blo05g00673 929 PIRSF IGluLR_plant 1 927 IPR017103 -
Blo05g00673 929 Gene3D - 738 816 - -
Blo05g00673 929 Gene3D - 147 422 - -
Blo05g00673 929 PANTHER GLUTAMATE RECEPTOR 3.6 15 913 - -
Blo05g00673 929 Pfam Bacterial extracellular solute-binding proteins, family 3 487 809 IPR001638 -
Blo05g00673 929 Gene3D - 461 579 - -
Blo05g00673 929 SUPERFAMILY Periplasmic binding protein-like II 446 811 - -
Blo05g00673 929 SMART GluR_14 468 811 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01642 Blo-Chr1:56222839 Blo05g00673 Blo-Chr5:22078313 0 dispersed
Blo05g00673 Blo-Chr5:22078313 Blo15g00499 Blo-Chr15:8416282 0 dispersed
Blo05g00673 Blo-Chr5:22078313 Blo02g00114 Blo-Chr2:837458 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00673 K05387 - csv:101213408 1352.81