Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00739 ATGATCCACGAAAAAAGATCGGAGGCACTGAAGAAGGCCAAGATGGAAAATGAACTCGGGGAGGAAGTGGGTGGGAAAATCGCACCAGCAGAAAATGAGGAGGCAAGCGAAGAGGAATCTATCACGAAAGGAGAAGGGGAGTCAACACCGGAGGACATTTGTTGCGAGCAAACAATTGCACACGAAGAGCTTGTGACGGGAAAAATAGAGGAAAAAGCATATGGGAAAGTCGCGACTACAGGACAGGAACCGGCGAGAGTGGAAATGGAGGCGCCAGTGAAGGTGGAGATGGAAGAGTCGGTGACAGCGGAAACAAGGGAAGCGACAGAAACCACCGACAGTGGAAATGGAGAAACCGCCGATGGTGGAAACGAAGAAACCGCAGAAGATAAGTTTCCAGAACTCAAGAAAAGTCTCGACTGCAGGAAAAGAGGAGCCTGTGACGACGGAAATGGCGCAACCGGCGACCGCGGAGATGGAGTAACTGGCGTCGTTGGCGGTTATGGAGAAAACTGTTTGGAAATGGTTGAGCTGGCACATATCGATGGAGAAAACTCGCTGGATAGGGATGAGTTGGCAGGAGAGGAAACATTAATTAAAAAAAATGAAGATAAAGGAAACTATTTTTTGATTCAACAAGCACAAAAGTTCTTTATGGAGACTAATGAATCAAGTGATACACGAAATATGGGTTTCCAATTTGCGGGGAAAGCAGTGTATACAGCAGTTTGGGTTGCTGCTGTTTCATTATTCATGGAGTTGTTGGGTTTTTCTACCCAGAAATGGCTTACTGCTGGAGGTCTTGGGACAGTATTGCTAACTCTTTCCGGTCGTGAGATATTTACAAATTTCCTTTCAAGTGCAATGATTCATGCAACCCGGCCTTTTGTTGTGAATGAATGGATTCAAACAAAGATTGAAGGTTATGAAGTTTCTGGTACTGTTGAGCATGTGGGTTGGTGGTCCCCCACAATTGTAAGAGGTGAAGATCGTGAAGCAGTTCACATTCCAAATCACAAGTTCACTGTAAATGTTGTGAGAAATCTTAGTCAAAAAACTCATTGGCGTATTAAAACTCACCTTGCCATTAGTCATTTGGACGTTAATAAGATCAATAATATTGTTGCTGATATGCGCAAAGTATTAGCCAAGAATCCTCAAGTTGAACACAAAAGACTACATAGAAGAGTATTTTTAGAAAACGTCAATCCTGAAAATCAGGCTCTATTGATTTTGATATCATGTTTTGTGAAGACATCGCATTTTGAGGAATATTTGTGTGTTAAGGAAGCCATACTATTGGATCTGCTTAGAGTCATCAGCCATCACCGAGCAAGACTAGCCACGCCAATTCGTACAGTTCAGAAAATATACAGTGACGCAGACTTGGAAAGCATCCCGTATGCAGATTCCAGATTTAATCGGGGTGGAGTGGCATCCAACCGCCCATTGCTCATGATCGAACCACCGTACAGAATCAATGGGGAAGATAAAATGCGAAATCAAAATCGTGTAGTGCGTACAACAGCGGATGCCAACATAGAGAAGGCAAAAGAAGGACCTCAGACTGATGACAAGGGAGATAGCAAAAATAGGGTATCTCCAGATTCCACTTCTAAGGACGATTCAAAAGTTGGAGCTGAAACAAGTCCAGGCACTTTGTCCGATCAGGCGGCTGTAAAATCAGCATTAGCGATGCATGTCTGCAAGACAGATTCTAAGGCTCAAGAAATGGGTGCCGCTGATGTCGGAATGACTGAAAATTCAGCAAAGAAGGCCATGGATCTAGGAAAGAAGAGACCGAATATCAAGTCAGACACTCTGGCAATTCCTTCATCAGAAACTAATGCTGGAAATCCAGCAAAATCGGACGGCGACAAACTACGGGTTACTCAGGCACCATCGTCGATGCCTGCATTGGAAGAGAACATTGTCCTGGGCGTGGCTCTGGAAGGGTCAAAGAGAACACTTCCTATTGAGGAAGAAGATATGGCTTCAACTAAGGAATTGGCTTCTTGTCTGAACGGAAGTGCGCTTACAGCTTCTGAGAAAGATAAGAAAGAGGATCAAACAAAAGCTTCTTCTTCATCTGGTGATTAG 2100 44.1 MIHEKRSEALKKAKMENELGEEVGGKIAPAENEEASEEESITKGEGESTPEDICCEQTIAHEELVTGKIEEKAYGKVATTGQEPARVEMEAPVKVEMEESVTAETREATETTDSGNGETADGGNEETAEDKFPELKKSLDCRKRGACDDGNGATGDRGDGVTGVVGGYGENCLEMVELAHIDGENSLDRDELAGEETLIKKNEDKGNYFLIQQAQKFFMETNESSDTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLSGREIFTNFLSSAMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEHKRLHRRVFLENVNPENQALLILISCFVKTSHFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYSDADLESIPYADSRFNRGGVASNRPLLMIEPPYRINGEDKMRNQNRVVRTTADANIEKAKEGPQTDDKGDSKNRVSPDSTSKDDSKVGAETSPGTLSDQAAVKSALAMHVCKTDSKAQEMGAADVGMTENSAKKAMDLGKKRPNIKSDTLAIPSSETNAGNPAKSDGDKLRVTQAPSSMPALEENIVLGVALEGSKRTLPIEEEDMASTKELASCLNGSALTASEKDKKEDQTKASSSSGD 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26349643 26356600 + BLOR15701 Blo05g00739 61173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00739 699 Pfam Mechanosensitive ion channel 237 444 IPR006685 GO:0016020|GO:0055085
Blo05g00739 699 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 210 695 - -
Blo05g00739 699 MobiDBLite consensus disorder prediction 603 629 - -
Blo05g00739 699 Gene3D - 296 351 IPR023408 -
Blo05g00739 699 MobiDBLite consensus disorder prediction 511 543 - -
Blo05g00739 699 MobiDBLite consensus disorder prediction 1 50 - -
Blo05g00739 699 MobiDBLite consensus disorder prediction 107 121 - -
Blo05g00739 699 Gene3D - 207 294 - -
Blo05g00739 699 MobiDBLite consensus disorder prediction 676 699 - -
Blo05g00739 699 MobiDBLite consensus disorder prediction 606 620 - -
Blo05g00739 699 MobiDBLite consensus disorder prediction 97 135 - -
Blo05g00739 699 SUPERFAMILY Sm-like ribonucleoproteins 280 350 IPR010920 -
Blo05g00739 699 MobiDBLite consensus disorder prediction 509 556 - -
Blo05g00739 699 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 210 695 IPR045042 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00739 Blo-Chr5:26349643 Blo18g00106 Blo-Chr18:991140 0 dispersed
Blo16g00755 Blo-Chr16:31209733 Blo05g00739 Blo-Chr5:26349643 1.23E-20 dispersed
Blo02g01178 Blo-Chr2:43458931 Blo05g00739 Blo-Chr5:26349643 1.29E-15 transposed
Blo17g00099 Blo-Chr17:810584 Blo05g00739 Blo-Chr5:26349643 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00739 K22047 - pvy:116146380 640.573