Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo05g00749 | ATGACTTTGTACTCTCTACGTCACAAATCAAGTTTTCTGCTTCGCAGGCCGCCAAACTTTCTCATTGACAGAGGTGAGGTCATCGAAGCGAGATCCTTGGTCTGGCCTACCGCCAAATCAACTGAGGTTGAGGTGGTTAATCGGACAGCGACTGAGCACCGTGGTCCAGCTTTGGAACAAGTGGCGCGTGTTTTAGACGCGCTACTGTTGAGATTTGACGACCAAGAAGAGCATGACGAAGAGATGGCGAGCTTCGACTCGCTCGGAAACTCGGGGTCGAGGGTGAAAATGGCCAACTTGGAAGCTACGAGTCCGCAGAGTAGGAAGCCGAGGTACAGAGAGTGTTTGAAGAATCATGCCGTCGGCATCGGTGGCCACGCCCTCGATGGCTGCGGTGAGTTTATGCCGGCCGGAGCAGAAGGAACGATGGATGGGCTCAAATGCGCCGCCTGCAGCTGCCACCGGAACTTCCACCGGAAGGAGACTGACGCCGGCATCGCAGTCGGAGACCATTTCCTTCTCCCTCACCACCCCCACCCGCAGTTCTCACCTTACTACCGAACTCCGGCGGGGTACCTCCACGTCGCACATCACCAGAGGCCGCTGGCCCTCCCATCGACGTCAGGGGGAGGAGGAAGCCATAGCCGGGAAGATCAGGAGGACATTTCCAACCCAAACGGCGGCCATGGAGGCAGCGGAAGCGGAGCGTTTGGGAAGAAAAGATTCAGAACGAAGTTCAGTCAAGATCAGAAAGAGAGAATGCTGGGTTTAGCGGAAAGACTCGGATGGAGGATTCAGAAACACGACGACCCCATAGTTCAGCAGTTCTGCACCGAAACAGGGGTTAAACGACAGGTGAAGAACTGGAAATGGTGGAGGTACAGTCCAGCTGAAGTTAACTCTAGGCTTACTGTTCGTACCTGGGAGATGAAAATGTGGCATTTTTTGATCATCATGGGACCTGCAAACTGTGGTTCAGTGGTTCGGTTCAGAAAAACACGGAGAGAGGGAGAGAAATTCGCATGGCCTTCGGCCATTTTGCGATTTCTCAACAGAAATAGAGAGGGGGGCCGAGAGATGGAAACCAAAAAGAGAGAGAGGGAGAAGGCGACGGGAGACGCGATCGGGAAGGATGGATTGAGGGCGGTGACGACGAGGGCTCAGGCGGCAATATCCGGCGTTGTGGCAAAGCATGTGTCGTCGTCGGGAGCTAGGGCTTCGGTGGAACGCTCGAACAGTCTGTGTGAGCGTCGATTGAACGCGGGATGA | 1269 | 54.93 | MTLYSLRHKSSFLLRRPPNFLIDRGEVIEARSLVWPTAKSTEVEVVNRTATEHRGPALEQVARVLDALLLRFDDQEEHDEEMASFDSLGNSGSRVKMANLEATSPQSRKPRYRECLKNHAVGIGGHALDGCGEFMPAGAEGTMDGLKCAACSCHRNFHRKETDAGIAVGDHFLLPHHPHPQFSPYYRTPAGYLHVAHHQRPLALPSTSGGGGSHSREDQEDISNPNGGHGGSGSGAFGKKRFRTKFSQDQKERMLGLAERLGWRIQKHDDPIVQQFCTETGVKRQVKNWKWWRYSPAEVNSRLTVRTWEMKMWHFLIIMGPANCGSVVRFRKTRREGEKFAWPSAILRFLNRNREGGREMETKKREREKATGDAIGKDGLRAVTTRAQAAISGVVAKHVSSSGARASVERSNSLCERRLNAG | 422 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 26862729 | 26876343 | + | BLOR15711 | Blo05g00749 | 61183 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo05g00749 | 422 | SUPERFAMILY | Homeodomain-like | 226 | 289 | IPR009057 | - | |
| Blo05g00749 | 422 | Pfam | ZF-HD protein dimerisation region | 111 | 162 | IPR006456 | - | |
| Blo05g00749 | 422 | Gene3D | - | 225 | 292 | - | - | |
| Blo05g00749 | 422 | MobiDBLite | consensus disorder prediction | 357 | 377 | - | - | |
| Blo05g00749 | 422 | ProSiteProfiles | Zinc-finger ZF-HD dimerization-type profile. | 112 | 161 | IPR006456 | - | |
| Blo05g00749 | 422 | MobiDBLite | consensus disorder prediction | 202 | 239 | - | - | |
| Blo05g00749 | 422 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 2 | 93 | 286 | - | - | |
| Blo05g00749 | 422 | TIGRFAM | ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain | 111 | 161 | IPR006456 | - | |
| Blo05g00749 | 422 | MobiDBLite | consensus disorder prediction | 357 | 375 | - | - | |
| Blo05g00749 | 422 | PANTHER | ZINC-FINGER HOMEODOMAIN PROTEIN 1 | 93 | 286 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo05g00749 | Blo-Chr5:26862729 | Blo16g00046 | Blo-Chr16:1874806 | 7.11E-49 | dispersed | |
| Blo12g00721 | Blo-Chr12:25540007 | Blo05g00749 | Blo-Chr5:26862729 | 3.70E-49 | wgd | |
| Blo05g00749 | Blo-Chr5:26862729 | Blo06g00064 | Blo-Chr6:1846331 | 4.36E-121 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 12425 | PF04770 | ZF-HD_dimer | 1.60E-28 | No_clan | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo05g00749 | - | - | vri:117919209 | 313.153 |