Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo05g00762 ATGTCAAACTCCGGAGAATCTTCTTTCAATCCCGTAGGATTTTCCGGCGAACCTTTCCAACGAGGTCCAGTCAGTAATGGTGATCCTCGGGTACCGTTACGGAACTTGTCAACGCTGTGCGTGAGAATGGATTCGGTGCAGCGGTTTCTATCCGATTCGGTCAATAGAGGGACTTTGATAGGGAAGGATCAGATGGAAATGGTATCTTCTGAGATATCCTCGGCGATTCAAGAGATCGTCGTTAATGGCACGGCGCTGCTCGCTTGTGCGCAGAAACCGATATCGATGGAATCCACTTCAGTGGCAGCTGGAAAGCCATCAAATTCGCCGGAGAGAGTTTCTTCGATGAGTAATATTTGCTCTGGAAAAAGAAAGGAGGGACTGAAATTGGAGGATGTGGAGGAGGATGCGATAACCGAGACCGGAGATTATGAAATCGATTGTGAAATTGTTGAGTTAGACGCCGTGGAATTACTGGCGGAGTACATACATTTCTGCGAAATCTGCGGGAAAGCATTCAAACGTGATGCGAATTTGAGAATGCACAAGCGCGCTCACGGAAACCAGTTCAAGACTCTGGAGGCTCTGGCGAAGCCGCAAGAAAAATTCGAGAAAGCAAGAACGAGGAGACGCGATTTTTCGTGCCCTTACAAACTATGTAACCGCAATAAATCTCACAAGAAATTCAAGCCTCTGAAATCGGCGATCTGCTTGAGGAATCACTTCAAGCGGAGCCATTGCCCTAAGTTGTATTCGTGTAATCGATGCAATAAGAAGAGCTTCTCCGTTTTGGCCGATTTGAAGAGCCACCTGAAGCACTGCGGAGAGTCAAAATGGCGATGCTCGTGCGGAATGAGCTTCTCGCGCGAGGACAAGCTGTTTGCGCACGTTGCGCTGTTTGAGGGCCACATGGCGGCGGTGATGGATGAAAACGAGAGGGGAAAGGGAAAGGCTGCATTGGCGGAAGTAGAGGAGGAGGAAAGAGGTTCGAATTGCTCGGATGATGGATTTTTCGATGGGCTGCCTGAGGAGTTTGGTAGATTACAGAATTATTGCTTCGAAGATGCATTTGGGTTCAGAAATGGCGTAGATCCTGGAATGGGAAATTCATGA 1113 48.34 MSNSGESSFNPVGFSGEPFQRGPVSNGDPRVPLRNLSTLCVRMDSVQRFLSDSVNRGTLIGKDQMEMVSSEISSAIQEIVVNGTALLACAQKPISMESTSVAAGKPSNSPERVSSMSNICSGKRKEGLKLEDVEEDAITETGDYEIDCEIVELDAVELLAEYIHFCEICGKAFKRDANLRMHKRAHGNQFKTLEALAKPQEKFEKARTRRRDFSCPYKLCNRNKSHKKFKPLKSAICLRNHFKRSHCPKLYSCNRCNKKSFSVLADLKSHLKHCGESKWRCSCGMSFSREDKLFAHVALFEGHMAAVMDENERGKGKAALAEVEEEERGSNCSDDGFFDGLPEEFGRLQNYCFEDAFGFRNGVDPGMGNS 370
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 27494915 27496027 - BLOR15724 Blo05g00762 61196
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo05g00762 370 PANTHER ZINC FINGER PROTEIN STOP1 HOMOLOG 4 365 - -
Blo05g00762 370 MobiDBLite consensus disorder prediction 1 31 - -
Blo05g00762 370 Pfam Zinc finger, C2H2 type 165 186 IPR013087 -
Blo05g00762 370 ProSitePatterns Zinc finger C2H2 type domain signature. 166 186 IPR013087 -
Blo05g00762 370 ProSiteProfiles Zinc finger C2H2 type domain profile. 164 191 IPR013087 -
Blo05g00762 370 Gene3D Classic Zinc Finger 239 306 - -
Blo05g00762 370 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 4 365 IPR044300 GO:0010044|GO:0010447
Blo05g00762 370 SUPERFAMILY beta-beta-alpha zinc fingers 161 187 IPR036236 -
Blo05g00762 370 SMART c2h2final6 251 273 IPR013087 -
Blo05g00762 370 SMART c2h2final6 164 186 IPR013087 -
Blo05g00762 370 SMART c2h2final6 213 246 IPR013087 -
Blo05g00762 370 SMART c2h2final6 279 303 IPR013087 -
Blo05g00762 370 Gene3D Classic Zinc Finger 160 188 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01759 Blo-Chr1:57342509 Blo05g00762 Blo-Chr5:27494915 9.09E-75 dispersed
Blo05g00762 Blo-Chr5:27494915 Blo12g00911 Blo-Chr12:27295851 5.57E-25 dispersed
Blo05g00762 Blo-Chr5:27494915 Blo10g00983 Blo-Chr10:29046214 6.71E-26 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12427 PF00096 zf-C2H2 0.0011 CL0361 Blo TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo05g00762 - - csin:114317837 413.305